RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 ARXQ96QS3 562 aa22.25■■□□□ 1.15
CD40-202ENST00000372285 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
CD40-202ENST00000372285 PA2G4Q9UQ80 394 aaKnown RBP22.25■■□□□ 1.15
CD40-202ENST00000372285 TAF1LQ8IZX4 1826 aa22.24■■□□□ 1.15
CD40-202ENST00000372285 PCCAP05165 728 aaPredicted RBP22.23■■□□□ 1.15
CD40-202ENST00000372285 MX1P20591 662 aa22.23■■□□□ 1.15
CD40-202ENST00000372285 RFX5P48382 616 aaPredicted RBP22.23■■□□□ 1.15
CD40-202ENST00000372285 OS9Q13438 667 aaPredicted RBP22.23■■□□□ 1.15
CD40-202ENST00000372285 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
CD40-202ENST00000372285 COPRSQ9NQ92 184 aa22.23■■□□□ 1.15
CD40-202ENST00000372285 TBC1D2BQ9UPU7 963 aa22.23■■□□□ 1.15
CD40-202ENST00000372285 BCORQ6W2J9 1755 aa22.23■■□□□ 1.15
CD40-202ENST00000372285 AOX1Q06278 1338 aa22.23■■□□□ 1.15
CD40-202ENST00000372285 LINC00116Q8NCU8 138 aa22.23■■□□□ 1.15
CD40-202ENST00000372285 CNTNAP4Q9C0A0 1308 aa22.22■■□□□ 1.15
CD40-202ENST00000372285 G3BP1Q13283 466 aaKnown RBP eCLIP22.22■■□□□ 1.15
CD40-202ENST00000372285 NLRP10Q86W26 655 aa22.22■■□□□ 1.15
CD40-202ENST00000372285 ZBTB38Q8NAP3 1195 aaPredicted RBP22.22■■□□□ 1.15
CD40-202ENST00000372285 LMBR1LQ6UX01 489 aa22.21■■□□□ 1.15
CD40-202ENST00000372285 MYH3P11055 1940 aa22.21■■□□□ 1.15
CD40-202ENST00000372285 RC3H1Q5TC82 1133 aaKnown RBP22.2■■□□□ 1.14
CD40-202ENST00000372285 ZNF772Q68DY9 489 aaPredicted RBP22.2■■□□□ 1.14
CD40-202ENST00000372285 ZNF34Q8IZ26 560 aa22.2■■□□□ 1.14
CD40-202ENST00000372285 PLA2G12BQ9BX93 195 aa22.2■■□□□ 1.14
CD40-202ENST00000372285 CDHR2Q9BYE9 1310 aa22.2■■□□□ 1.14
CD40-202ENST00000372285 PTPN12Q05209 780 aaKnown RBP22.2■■□□□ 1.14
CD40-202ENST00000372285 BCL11BQ9C0K0 894 aaPredicted RBP22.2■■□□□ 1.14
CD40-202ENST00000372285 CDC45O75419 566 aa22.19■■□□□ 1.14
CD40-202ENST00000372285 SASH1O94885 1247 aa22.19■■□□□ 1.14
CD40-202ENST00000372285 CAMTA2O94983 1202 aa22.19■■□□□ 1.14
CD40-202ENST00000372285 RTL5Q5HYW3 569 aaPredicted RBP22.19■■□□□ 1.14
CD40-202ENST00000372285 UPF2Q9HAU5 1272 aaKnown RBP22.19■■□□□ 1.14
CD40-202ENST00000372285 USP42Q9H9J4 1324 aaKnown RBP22.18■■□□□ 1.14
CD40-202ENST00000372285 SDSP20132 328 aa22.18■■□□□ 1.14
CD40-202ENST00000372285 GPTP24298 496 aa22.18■■□□□ 1.14
CD40-202ENST00000372285 CLASRPQ8N2M8 674 aaKnown RBP22.18■■□□□ 1.14
CD40-202ENST00000372285 TBC1D9Q6ZT07 1266 aa22.17■■□□□ 1.14
CD40-202ENST00000372285 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
CD40-202ENST00000372285 KLHDC4Q8TBB5 520 aa22.17■■□□□ 1.14
CD40-202ENST00000372285 RBM6P78332 1123 aaKnown RBP22.17■■□□□ 1.14
CD40-202ENST00000372285 FAM196AQ6ZSG2 479 aa22.17■■□□□ 1.14
CD40-202ENST00000372285 KRT27Q7Z3Y8 459 aa22.17■■□□□ 1.14
CD40-202ENST00000372285 FAM89AQ96GI7 184 aa22.17■■□□□ 1.14
CD40-202ENST00000372285 KCNQ4P56696 695 aa22.16■■□□□ 1.14
CD40-202ENST00000372285 SIL1Q9H173 461 aa22.16■■□□□ 1.14
CD40-202ENST00000372285 CCNL1Q9UK58 526 aaPredicted RBP22.16■■□□□ 1.14
CD40-202ENST00000372285 AK9Q5TCS8 1911 aa22.16■■□□□ 1.14
CD40-202ENST00000372285 UBN2Q6ZU65 1347 aa22.16■■□□□ 1.14
CD40-202ENST00000372285 RGL2O15211 777 aa22.15■■□□□ 1.14
CD40-202ENST00000372285 IPO9Q96P70 1041 aaKnown RBP22.15■■□□□ 1.14
CD40-202ENST00000372285 SCN7AQ01118 1682 aa22.15■■□□□ 1.14
CD40-202ENST00000372285 CSF1RP07333 972 aa22.14■■□□□ 1.14
CD40-202ENST00000372285 TTC41PQ6P2S7 1318 aa22.14■■□□□ 1.13
CD40-202ENST00000372285 TSHZ3Q63HK5 1081 aa22.14■■□□□ 1.13
CD40-202ENST00000372285 TBC1D32Q96NH3 1257 aa22.14■■□□□ 1.13
CD40-202ENST00000372285 TRMT112Q9UI30 125 aaKnown RBP22.14■■□□□ 1.13
CD40-202ENST00000372285 CHMP3Q9Y3E7 222 aa22.14■■□□□ 1.13
CD40-202ENST00000372285 C4BP0C0L5 1744 aa22.13■■□□□ 1.13
CD40-202ENST00000372285 EIF5BO60841 1220 aaKnown RBP22.13■■□□□ 1.13
CD40-202ENST00000372285 RPS6KA4O75676 772 aa22.13■■□□□ 1.13
CD40-202ENST00000372285 PARP10Q53GL7 1025 aa22.13■■□□□ 1.13
CD40-202ENST00000372285 CLEC4GQ6UXB4 293 aa22.13■■□□□ 1.13
CD40-202ENST00000372285 PI4K2BQ8TCG2 481 aa22.13■■□□□ 1.13
CD40-202ENST00000372285 MFAP1P55081 439 aaKnown RBP22.12■■□□□ 1.13
CD40-202ENST00000372285 ILDR1Q86SU0 546 aaPredicted RBP22.12■■□□□ 1.13
CD40-202ENST00000372285 ZNF652Q9Y2D9 606 aa22.12■■□□□ 1.13
CD40-202ENST00000372285 LAMB2P55268 1798 aa22.12■■□□□ 1.13
CD40-202ENST00000372285 IFIT2P09913 472 aaKnown RBP22.11■■□□□ 1.13
CD40-202ENST00000372285 AACSQ86V21 672 aa22.11■■□□□ 1.13
CD40-202ENST00000372285 SYNE4Q8N205 404 aa22.11■■□□□ 1.13
CD40-202ENST00000372285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.11■■□□□ 1.13
CD40-202ENST00000372285 EAF2Q96CJ1 260 aaPredicted RBP22.11■■□□□ 1.13
CD40-202ENST00000372285 AK7Q96M32 723 aa22.11■■□□□ 1.13
CD40-202ENST00000372285 IRS4O14654 1257 aaPredicted RBP22.1■■□□□ 1.13
CD40-202ENST00000372285 DDRGK1Q96HY6 314 aa22.1■■□□□ 1.13
CD40-202ENST00000372285 GPATCH3Q96I76 525 aa22.1■■□□□ 1.13
CD40-202ENST00000372285 DDX60Q8IY21 1712 aaKnown RBP22.09■■□□□ 1.13
CD40-202ENST00000372285 CIAO1O76071 339 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 SUSD4Q5VX71 490 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 ATG9AQ7Z3C6 839 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 ECHDC1Q9NTX5 307 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 FBXO3Q9UK99 471 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 PDE8AO60658 829 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 GLRX3O76003 335 aaKnown RBP22.09■■□□□ 1.13
CD40-202ENST00000372285 TFCP2Q12800 502 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 CCDC57Q2TAC2 916 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 CASC1Q6TDU7 716 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 TTLL11Q8NHH1 800 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 UTP14AQ9BVJ6 771 aaKnown RBP22.09■■□□□ 1.13
CD40-202ENST00000372285 C22orf23Q9BZE7 217 aa22.09■■□□□ 1.13
CD40-202ENST00000372285 EYA2O00167 538 aa22.08■■□□□ 1.12
CD40-202ENST00000372285 ERC2O15083 957 aa22.08■■□□□ 1.12
CD40-202ENST00000372285 CTSWP56202 376 aa22.08■■□□□ 1.12
CD40-202ENST00000372285 NIP7Q9Y221 180 aaKnown RBP eCLIP22.08■■□□□ 1.12
CD40-202ENST00000372285 SH3TC1Q8TE82 1336 aa22.08■■□□□ 1.12
CD40-202ENST00000372285 GNPATO15228 680 aa22.07■■□□□ 1.12
CD40-202ENST00000372285 IL15P40933 162 aaPredicted RBP22.07■■□□□ 1.12
CD40-202ENST00000372285 NARFQ9UHQ1 456 aa22.07■■□□□ 1.12
CD40-202ENST00000372285 C4AP0C0L4 1744 aa22.07■■□□□ 1.12
CD40-202ENST00000372285 TRIM6-TRIM34B2RNG4 842 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms