RNA–Protein interactions for RNA: ENST00000372275.5

TMEM254-203, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-203ENST00000372275 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
TMEM254-203ENST00000372275 DCTN1Q14203 1278 aa12.49□□□□□ -0.41
TMEM254-203ENST00000372275 HLFQ16534 295 aa12.49□□□□□ -0.41
TMEM254-203ENST00000372275 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
TMEM254-203ENST00000372275 PHACTR3Q96KR7 559 aa12.49□□□□□ -0.41
TMEM254-203ENST00000372275 TNRC18O15417 2968 aaPredicted RBP12.49□□□□□ -0.41
TMEM254-203ENST00000372275 RASSF10A6NK89 507 aa12.48□□□□□ -0.41
TMEM254-203ENST00000372275 GNAT3A8MTJ3 354 aa12.48□□□□□ -0.41
TMEM254-203ENST00000372275 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
TMEM254-203ENST00000372275 IARSP41252 1262 aaKnown RBP12.48□□□□□ -0.41
TMEM254-203ENST00000372275 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
TMEM254-203ENST00000372275 NIP7Q9Y221 180 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMEM254-203ENST00000372275 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
TMEM254-203ENST00000372275 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
TMEM254-203ENST00000372275 EPS15P42566 896 aa12.47□□□□□ -0.41
TMEM254-203ENST00000372275 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
TMEM254-203ENST00000372275 DLK2Q6UY11 383 aa12.47□□□□□ -0.41
TMEM254-203ENST00000372275 MCM10Q7L590 875 aa12.47□□□□□ -0.41
TMEM254-203ENST00000372275 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
TMEM254-203ENST00000372275 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
TMEM254-203ENST00000372275 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
TMEM254-203ENST00000372275 ZNF428Q96B54 188 aa12.47□□□□□ -0.41
TMEM254-203ENST00000372275 CAPNS2Q96L46 248 aa12.47□□□□□ -0.41
TMEM254-203ENST00000372275 SNED1Q8TER0 1413 aa12.46□□□□□ -0.41
TMEM254-203ENST00000372275 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.41
TMEM254-203ENST00000372275 NPR1P16066 1061 aa12.46□□□□□ -0.41
TMEM254-203ENST00000372275 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
TMEM254-203ENST00000372275 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
TMEM254-203ENST00000372275 FZD9O00144 591 aa12.45□□□□□ -0.42
TMEM254-203ENST00000372275 GPTP24298 496 aa12.45□□□□□ -0.42
TMEM254-203ENST00000372275 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
TMEM254-203ENST00000372275 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
TMEM254-203ENST00000372275 SCNN1DP51172 638 aa12.44□□□□□ -0.42
TMEM254-203ENST00000372275 MLLT1Q03111 559 aaPredicted RBP12.44□□□□□ -0.42
TMEM254-203ENST00000372275 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
TMEM254-203ENST00000372275 CST9Q5W186 159 aa12.44□□□□□ -0.42
TMEM254-203ENST00000372275 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
TMEM254-203ENST00000372275 ZNF408Q9H9D4 720 aa12.44□□□□□ -0.42
TMEM254-203ENST00000372275 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
TMEM254-203ENST00000372275 SHTN1A0MZ66 631 aa12.43□□□□□ -0.42
TMEM254-203ENST00000372275 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
TMEM254-203ENST00000372275 GAS2L2Q8NHY3 880 aa12.43□□□□□ -0.42
TMEM254-203ENST00000372275 GPR101Q96P66 508 aaPredicted RBP12.43□□□□□ -0.42
TMEM254-203ENST00000372275 ZIC5Q96T25 663 aa12.43□□□□□ -0.42
TMEM254-203ENST00000372275 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
TMEM254-203ENST00000372275 MAP2K1Q02750 393 aaPredicted RBP12.42□□□□□ -0.42
TMEM254-203ENST00000372275 GPC2Q8N158 579 aa12.42□□□□□ -0.42
TMEM254-203ENST00000372275 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
TMEM254-203ENST00000372275 GLIS2Q9BZE0 524 aaPredicted RBP12.42□□□□□ -0.42
TMEM254-203ENST00000372275 MCOLN1Q9GZU1 580 aa12.42□□□□□ -0.42
TMEM254-203ENST00000372275 LMOD1P29536 600 aaPredicted RBP12.41□□□□□ -0.42
TMEM254-203ENST00000372275 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
TMEM254-203ENST00000372275 TRIM26Q12899 539 aaPredicted RBP12.41□□□□□ -0.42
TMEM254-203ENST00000372275 POTEHQ6S545 545 aa12.41□□□□□ -0.42
TMEM254-203ENST00000372275 TTLL7Q6ZT98 887 aa12.41□□□□□ -0.42
TMEM254-203ENST00000372275 PNMA8AQ86V59 439 aaPredicted RBP12.41□□□□□ -0.42
TMEM254-203ENST00000372275 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
TMEM254-203ENST00000372275 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
TMEM254-203ENST00000372275 AKAP11Q9UKA4 1901 aa12.41□□□□□ -0.42
TMEM254-203ENST00000372275 ANKRD36CQ5JPF3 1778 aa12.41□□□□□ -0.42
TMEM254-203ENST00000372275 UBN2Q6ZU65 1347 aa12.4□□□□□ -0.42
TMEM254-203ENST00000372275 AOC3Q16853 763 aa12.4□□□□□ -0.42
TMEM254-203ENST00000372275 TPTE2Q6XPS3 522 aa12.4□□□□□ -0.42
TMEM254-203ENST00000372275 RTKN2Q8IZC4 609 aa12.4□□□□□ -0.42
TMEM254-203ENST00000372275 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
TMEM254-203ENST00000372275 ZBTB3Q9H5J0 574 aa12.4□□□□□ -0.42
TMEM254-203ENST00000372275 ZNF652Q9Y2D9 606 aa12.4□□□□□ -0.42
TMEM254-203ENST00000372275 COL4A1P02462 1669 aa12.39□□□□□ -0.43
TMEM254-203ENST00000372275 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
TMEM254-203ENST00000372275 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
TMEM254-203ENST00000372275 CELF2O95319 508 aaKnown RBP12.39□□□□□ -0.43
TMEM254-203ENST00000372275 MYL6BP14649 208 aa12.39□□□□□ -0.43
TMEM254-203ENST00000372275 SOX10P56693 466 aa12.39□□□□□ -0.43
TMEM254-203ENST00000372275 DGKZQ13574 1117 aa12.39□□□□□ -0.43
TMEM254-203ENST00000372275 CIAPIN1Q6FI81 312 aa12.39□□□□□ -0.43
TMEM254-203ENST00000372275 RPGRQ92834 1020 aaKnown RBP12.39□□□□□ -0.43
TMEM254-203ENST00000372275 BEGAINQ9BUH8 593 aa12.39□□□□□ -0.43
TMEM254-203ENST00000372275 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
TMEM254-203ENST00000372275 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
TMEM254-203ENST00000372275 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
TMEM254-203ENST00000372275 SNRPA1P09661 255 aaKnown RBP12.38□□□□□ -0.43
TMEM254-203ENST00000372275 TRPM4Q8TD43 1214 aa12.38□□□□□ -0.43
TMEM254-203ENST00000372275 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
TMEM254-203ENST00000372275 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
TMEM254-203ENST00000372275 ALDH1B1P30837 517 aa12.37□□□□□ -0.43
TMEM254-203ENST00000372275 SUSD4Q5VX71 490 aa12.37□□□□□ -0.43
TMEM254-203ENST00000372275 CLEC4GQ6UXB4 293 aa12.37□□□□□ -0.43
TMEM254-203ENST00000372275 NIM1KQ8IY84 436 aa12.37□□□□□ -0.43
TMEM254-203ENST00000372275 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
TMEM254-203ENST00000372275 RAD17O75943 681 aa12.36□□□□□ -0.43
TMEM254-203ENST00000372275 ANXA1P04083 346 aa12.36□□□□□ -0.43
TMEM254-203ENST00000372275 ECE1P42892 770 aa12.36□□□□□ -0.43
TMEM254-203ENST00000372275 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
TMEM254-203ENST00000372275 PSMD1Q99460 953 aa12.36□□□□□ -0.43
TMEM254-203ENST00000372275 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
TMEM254-203ENST00000372275 HIRAP54198 1017 aaPredicted RBP12.35□□□□□ -0.43
TMEM254-203ENST00000372275 CXCL9Q07325 125 aa12.35□□□□□ -0.43
TMEM254-203ENST00000372275 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
TMEM254-203ENST00000372275 SAPCD2Q86UD0 394 aa12.35□□□□□ -0.43
TMEM254-203ENST00000372275 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms