RNA–Protein interactions for RNA: ENST00000372099.10

GTF3C5-203, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,999 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-203ENST00000372099 SF3B2Q13435 895 aaKnown RBP24.75■■□□□ 1.55
GTF3C5-203ENST00000372099 ERICH6Q7L0X2 663 aa24.75■■□□□ 1.55
GTF3C5-203ENST00000372099 PNMA6EA0A0J9YXQ4 647 aa24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 RFC4P35249 363 aa24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 HSP90AB3PQ58FF7 597 aa24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 ANKRD36CQ5JPF3 1778 aa24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 ZPR1O75312 459 aa24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 EPHA10Q5JZY3 1008 aa24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 SKAP1Q86WV1 359 aa24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 RPAP2Q8IXW5 612 aaPredicted RBP24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 FAM89AQ96GI7 184 aa24.74■■□□□ 1.55
GTF3C5-203ENST00000372099 TFCP2L1Q9NZI6 479 aa24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 C4AP0C0L4 1744 aa24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 BCORQ6W2J9 1755 aa24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 IBTKQ9P2D0 1353 aaPredicted RBP24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 RGPD3A6NKT7 1758 aaPredicted RBP24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 RGPD4Q7Z3J3 1758 aa24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 FAM177BA6PVY3 158 aa24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 CENPQQ7L2Z9 268 aaPredicted RBP24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 BICC1Q9H694 974 aaKnown RBP24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 NIP7Q9Y221 180 aaKnown RBP eCLIP24.73■■□□□ 1.55
GTF3C5-203ENST00000372099 CLEC4GQ6UXB4 293 aa24.72■■□□□ 1.55
GTF3C5-203ENST00000372099 BICDL1Q6ZP65 573 aa24.72■■□□□ 1.55
GTF3C5-203ENST00000372099 BAG6P46379 1132 aa24.71■■□□□ 1.55
GTF3C5-203ENST00000372099 ATP8B2P98198 1209 aa24.71■■□□□ 1.55
GTF3C5-203ENST00000372099 SUSD4Q5VX71 490 aa24.71■■□□□ 1.55
GTF3C5-203ENST00000372099 TBC1D9BQ66K14 1250 aa24.71■■□□□ 1.55
GTF3C5-203ENST00000372099 USP42Q9H9J4 1324 aaKnown RBP24.71■■□□□ 1.55
GTF3C5-203ENST00000372099 SSFA2P28290 1259 aa24.71■■□□□ 1.55
GTF3C5-203ENST00000372099 PPP1R42Q7Z4L9 355 aa24.71■■□□□ 1.55
GTF3C5-203ENST00000372099 ANO8Q9HCE9 1232 aaPredicted RBP24.71■■□□□ 1.55
GTF3C5-203ENST00000372099 ZNF652Q9Y2D9 606 aa24.7■■□□□ 1.54
GTF3C5-203ENST00000372099 ADRA2BP18089 450 aa24.69■■□□□ 1.54
GTF3C5-203ENST00000372099 ZBTB38Q8NAP3 1195 aaPredicted RBP24.69■■□□□ 1.54
GTF3C5-203ENST00000372099 TRMT112Q9UI30 125 aaKnown RBP24.69■■□□□ 1.54
GTF3C5-203ENST00000372099 SCN7AQ01118 1682 aa24.68■■□□□ 1.54
GTF3C5-203ENST00000372099 SRGAP3O43295 1099 aa24.67■■□□□ 1.54
GTF3C5-203ENST00000372099 PCCAP05165 728 aaPredicted RBP24.67■■□□□ 1.54
GTF3C5-203ENST00000372099 COL23A1Q86Y22 540 aaPredicted RBP24.67■■□□□ 1.54
GTF3C5-203ENST00000372099 TUBGCP6Q96RT7 1819 aa24.67■■□□□ 1.54
GTF3C5-203ENST00000372099 FOXO4P98177 505 aa24.67■■□□□ 1.54
GTF3C5-203ENST00000372099 GYS1P13807 737 aa24.65■■□□□ 1.54
GTF3C5-203ENST00000372099 SMC5Q8IY18 1101 aa24.65■■□□□ 1.54
GTF3C5-203ENST00000372099 NUTM1Q86Y26 1132 aa24.65■■□□□ 1.54
GTF3C5-203ENST00000372099 SSH3Q8TE77 659 aa24.65■■□□□ 1.54
GTF3C5-203ENST00000372099 HMGB2P26583 209 aaKnown RBP24.64■■□□□ 1.54
GTF3C5-203ENST00000372099 DCTPP1Q9H773 170 aa24.64■■□□□ 1.54
GTF3C5-203ENST00000372099 PNPLA7Q6ZV29 1317 aa24.64■■□□□ 1.53
GTF3C5-203ENST00000372099 NTSR2O95665 410 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 MTX1Q13505 466 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 POLA2Q14181 598 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 SLC15A2Q16348 729 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 LMBR1LQ6UX01 489 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 CCDC125Q86Z20 511 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 UTP14AQ9BVJ6 771 aaKnown RBP24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 HDAC5Q9UQL6 1122 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 SETDB2Q96T68 719 aa24.63■■□□□ 1.53
GTF3C5-203ENST00000372099 RGL2O15211 777 aa24.62■■□□□ 1.53
GTF3C5-203ENST00000372099 HMMRO75330 724 aa24.62■■□□□ 1.53
GTF3C5-203ENST00000372099 RABL6Q3YEC7 729 aaPredicted RBP24.62■■□□□ 1.53
GTF3C5-203ENST00000372099 APBB1O00213 710 aa24.62■■□□□ 1.53
GTF3C5-203ENST00000372099 IRS4O14654 1257 aaPredicted RBP24.62■■□□□ 1.53
GTF3C5-203ENST00000372099 NFIXQ14938 502 aa24.62■■□□□ 1.53
GTF3C5-203ENST00000372099 PDZRN3Q9UPQ7 1066 aa24.62■■□□□ 1.53
GTF3C5-203ENST00000372099 EXOC6BQ9Y2D4 811 aa24.62■■□□□ 1.53
GTF3C5-203ENST00000372099 HCLS1P14317 486 aaPredicted RBP24.61■■□□□ 1.53
GTF3C5-203ENST00000372099 KLHDC4Q8TBB5 520 aa24.61■■□□□ 1.53
GTF3C5-203ENST00000372099 CCDC85AQ96PX6 553 aaPredicted RBP24.61■■□□□ 1.53
GTF3C5-203ENST00000372099 PA2G4Q9UQ80 394 aaKnown RBP24.61■■□□□ 1.53
GTF3C5-203ENST00000372099 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.533e-8■■■■□ 20.9
GTF3C5-203ENST00000372099 SH3TC1Q8TE82 1336 aa24.6■■□□□ 1.53
GTF3C5-203ENST00000372099 CCDC24Q8N4L8 307 aa24.6■■□□□ 1.53
GTF3C5-203ENST00000372099 CDHR2Q9BYE9 1310 aa24.59■■□□□ 1.53
GTF3C5-203ENST00000372099 ERFEQ4G0M1 354 aa24.59■■□□□ 1.53
GTF3C5-203ENST00000372099 GCC1Q96CN9 775 aa24.59■■□□□ 1.53
GTF3C5-203ENST00000372099 BCL11AQ9H165 835 aa24.59■■□□□ 1.53
GTF3C5-203ENST00000372099 STK32BQ9NY57 414 aa24.59■■□□□ 1.53
GTF3C5-203ENST00000372099 CHMP3Q9Y3E7 222 aa24.59■■□□□ 1.53
GTF3C5-203ENST00000372099 PDGFDQ9GZP0 370 aaPredicted RBP24.58■■□□□ 1.53
GTF3C5-203ENST00000372099 ANKRD45Q5TZF3 282 aa24.58■■□□□ 1.52
GTF3C5-203ENST00000372099 PLA2G12BQ9BX93 195 aa24.58■■□□□ 1.52
GTF3C5-203ENST00000372099 SURF6O75683 361 aaKnown RBP24.57■■□□□ 1.52
GTF3C5-203ENST00000372099 TM4SF1P30408 202 aa24.56■■□□□ 1.52
GTF3C5-203ENST00000372099 RFX5P48382 616 aaPredicted RBP24.56■■□□□ 1.52
GTF3C5-203ENST00000372099 NBPF5PQ86XG9 351 aaPredicted RBP24.56■■□□□ 1.52
GTF3C5-203ENST00000372099 SMARCA5O60264 1052 aaPredicted RBP24.56■■□□□ 1.52
GTF3C5-203ENST00000372099 NUCB1Q02818 461 aa24.56■■□□□ 1.52
GTF3C5-203ENST00000372099 FLAD1Q8NFF5 587 aa24.56■■□□□ 1.52
GTF3C5-203ENST00000372099 TTLL11Q8NHH1 800 aa24.56■■□□□ 1.52
GTF3C5-203ENST00000372099 CSF1RP07333 972 aa24.55■■□□□ 1.52
GTF3C5-203ENST00000372099 LNPKQ9C0E8 428 aa24.55■■□□□ 1.52
GTF3C5-203ENST00000372099 PDE8AO60658 829 aa24.54■■□□□ 1.52
GTF3C5-203ENST00000372099 GTF2E1P29083 439 aaPredicted RBP24.54■■□□□ 1.52
GTF3C5-203ENST00000372099 CTSWP56202 376 aa24.54■■□□□ 1.52
GTF3C5-203ENST00000372099 PTPN12Q05209 780 aaKnown RBP24.54■■□□□ 1.52
GTF3C5-203ENST00000372099 FAM161AQ3B820 660 aa24.54■■□□□ 1.52
GTF3C5-203ENST00000372099 MSL1Q68DK7 614 aa24.54■■□□□ 1.52
GTF3C5-203ENST00000372099 C3orf67Q6ZVT6 689 aa24.54■■□□□ 1.52
GTF3C5-203ENST00000372099 SIL1Q9H173 461 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms