RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 CACNA1SQ13698 1873 aa16.14■□□□□ 0.17
SNCG-202ENST00000372017 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
SNCG-202ENST00000372017 LAMB2P55268 1798 aa16.14■□□□□ 0.17
SNCG-202ENST00000372017 KLRG2A4D1S0 409 aaPredicted RBP16.14■□□□□ 0.17
SNCG-202ENST00000372017 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
SNCG-202ENST00000372017 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
SNCG-202ENST00000372017 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
SNCG-202ENST00000372017 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
SNCG-202ENST00000372017 SSH1Q8WYL5 1049 aa16.14■□□□□ 0.17
SNCG-202ENST00000372017 METTL22Q9BUU2 404 aaPredicted RBP16.14■□□□□ 0.17
SNCG-202ENST00000372017 ZBED9Q6R2W3 1325 aa16.14■□□□□ 0.17
SNCG-202ENST00000372017 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
SNCG-202ENST00000372017 GRIN3BO60391 1043 aa16.13■□□□□ 0.17
SNCG-202ENST00000372017 IGKV5-2P06315 115 aa16.13■□□□□ 0.17
SNCG-202ENST00000372017 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
SNCG-202ENST00000372017 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
SNCG-202ENST00000372017 H0YIN7 160 aa16.12■□□□□ 0.17
SNCG-202ENST00000372017 NPHP1O15259 732 aa16.12■□□□□ 0.17
SNCG-202ENST00000372017 PDE6BP35913 854 aa16.12■□□□□ 0.17
SNCG-202ENST00000372017 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
SNCG-202ENST00000372017 PPP1R42Q7Z4L9 355 aa16.12■□□□□ 0.17
SNCG-202ENST00000372017 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
SNCG-202ENST00000372017 PIM2Q9P1W9 311 aa16.12■□□□□ 0.17
SNCG-202ENST00000372017 BCS1LQ9Y276 419 aa16.12■□□□□ 0.17
SNCG-202ENST00000372017 SLX4Q8IY92 1834 aa16.11■□□□□ 0.17
SNCG-202ENST00000372017 F6X3S4 739 aa16.11■□□□□ 0.17
SNCG-202ENST00000372017 DDX58O95786 925 aaKnown RBP16.11■□□□□ 0.17
SNCG-202ENST00000372017 SRGNP10124 158 aa16.11■□□□□ 0.17
SNCG-202ENST00000372017 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
SNCG-202ENST00000372017 SLC10A5Q5PT55 438 aa16.11■□□□□ 0.17
SNCG-202ENST00000372017 JARID2Q92833 1246 aaPredicted RBP16.11■□□□□ 0.17
SNCG-202ENST00000372017 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
SNCG-202ENST00000372017 CEP350Q5VT06 3117 aa16.11■□□□□ 0.17
SNCG-202ENST00000372017 RIC1Q4ADV7 1423 aa16.11■□□□□ 0.17
SNCG-202ENST00000372017 HCLS1P14317 486 aaPredicted RBP16.1■□□□□ 0.17
SNCG-202ENST00000372017 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
SNCG-202ENST00000372017 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
SNCG-202ENST00000372017 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
SNCG-202ENST00000372017 FAM89AQ96GI7 184 aa16.1■□□□□ 0.17
SNCG-202ENST00000372017 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNCG-202ENST00000372017 TAF1P21675 1872 aa16.09■□□□□ 0.17
SNCG-202ENST00000372017 COL4A1P02462 1669 aa16.08■□□□□ 0.17
SNCG-202ENST00000372017 NEURL1BA8MQ27 555 aa16.08■□□□□ 0.16
SNCG-202ENST00000372017 ALDH1L2Q3SY69 923 aa16.08■□□□□ 0.16
SNCG-202ENST00000372017 CRY2Q49AN0 593 aa16.08■□□□□ 0.16
SNCG-202ENST00000372017 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
SNCG-202ENST00000372017 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
SNCG-202ENST00000372017 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
SNCG-202ENST00000372017 DNAAF4Q8WXU2 420 aa16.08■□□□□ 0.16
SNCG-202ENST00000372017 MASTLQ96GX5 879 aa16.08■□□□□ 0.16
SNCG-202ENST00000372017 CT47B1P0C2W7 299 aaPredicted RBP16.07■□□□□ 0.16
SNCG-202ENST00000372017 RARSP54136 660 aaKnown RBP16.07■□□□□ 0.16
SNCG-202ENST00000372017 STYK1Q6J9G0 422 aa16.07■□□□□ 0.16
SNCG-202ENST00000372017 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
SNCG-202ENST00000372017 CWC25Q9NXE8 425 aaPredicted RBP16.07■□□□□ 0.16
SNCG-202ENST00000372017 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
SNCG-202ENST00000372017 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
SNCG-202ENST00000372017 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
SNCG-202ENST00000372017 NPR1P16066 1061 aa16.06■□□□□ 0.16
SNCG-202ENST00000372017 BEND3Q5T5X7 828 aa16.06■□□□□ 0.16
SNCG-202ENST00000372017 ZBTB38Q8NAP3 1195 aaPredicted RBP16.06■□□□□ 0.16
SNCG-202ENST00000372017 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
SNCG-202ENST00000372017 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
SNCG-202ENST00000372017 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
SNCG-202ENST00000372017 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
SNCG-202ENST00000372017 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
SNCG-202ENST00000372017 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
SNCG-202ENST00000372017 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
SNCG-202ENST00000372017 HOXA10P31260 410 aaPredicted RBP16.04■□□□□ 0.16
SNCG-202ENST00000372017 PRELPP51888 382 aa16.04■□□□□ 0.16
SNCG-202ENST00000372017 CASP7P55210 303 aa16.04■□□□□ 0.16
SNCG-202ENST00000372017 C7orf43Q8WVR3 580 aa16.04■□□□□ 0.16
SNCG-202ENST00000372017 NLRP3Q96P20 1036 aa16.04■□□□□ 0.16
SNCG-202ENST00000372017 GPBP1L1Q9HC44 474 aaPredicted RBP16.04■□□□□ 0.16
SNCG-202ENST00000372017 SBF1O95248 1867 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 FER1L6Q2WGJ9 1857 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 H7C1W4 665 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 C21orf2O43822 256 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 BCAR3O75815 825 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 BRPF1P55201 1214 aaPredicted RBP16.03■□□□□ 0.16
SNCG-202ENST00000372017 NEXNQ0ZGT2 675 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 GCKRQ14397 625 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 LINS1Q8NG48 757 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 CNKSR1Q969H4 720 aa16.03■□□□□ 0.16
SNCG-202ENST00000372017 NOB1Q9ULX3 412 aaKnown RBP16.03■□□□□ 0.16
SNCG-202ENST00000372017 PTPRCP08575 1304 aa16.02■□□□□ 0.16
SNCG-202ENST00000372017 SLC4A10Q6U841 1118 aa16.02■□□□□ 0.16
SNCG-202ENST00000372017 ARHGAP27Q6ZUM4 889 aa16.02■□□□□ 0.16
SNCG-202ENST00000372017 TNNQ9UQP3 1299 aa16.02■□□□□ 0.16
SNCG-202ENST00000372017 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
SNCG-202ENST00000372017 ABCC4O15439 1325 aa16.01■□□□□ 0.15
SNCG-202ENST00000372017 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
SNCG-202ENST00000372017 RASSF7Q02833 373 aa16.01■□□□□ 0.15
SNCG-202ENST00000372017 SF3B3Q15393 1217 aaKnown RBP16.01■□□□□ 0.15
SNCG-202ENST00000372017 IFFO2Q5TF58 517 aa16.01■□□□□ 0.15
SNCG-202ENST00000372017 RPGRQ92834 1020 aaKnown RBP16.01■□□□□ 0.15
SNCG-202ENST00000372017 MYH3P11055 1940 aa16.01■□□□□ 0.15
SNCG-202ENST00000372017 SNED1Q8TER0 1413 aa16.01■□□□□ 0.15
SNCG-202ENST00000372017 NFKBIEO00221 500 aa16■□□□□ 0.15
SNCG-202ENST00000372017 ALDH1B1P30837 517 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms