RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.42■■□□□ 1.98
BRD3-202ENST00000371834 ADAMTS7Q9UKP4 1686 aa27.42■■□□□ 1.98
BRD3-202ENST00000371834 GJB2P29033 226 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 HS1BP3Q53T59 392 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 LARP1Q6PKG0 1096 aaKnown RBP27.41■■□□□ 1.98
BRD3-202ENST00000371834 TMEM87AQ8NBN3 555 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 DDX17Q92841 729 aaKnown RBP27.41■■□□□ 1.98
BRD3-202ENST00000371834 MYD88Q99836 296 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 C5P01031 1676 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 F13A1P00488 732 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 KCNJ4P48050 445 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 ST3GAL1Q11201 340 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 CREB3L3Q68CJ9 461 aa27.41■■□□□ 1.98
BRD3-202ENST00000371834 TM6SF1Q9BZW5 370 aa27.4■■□□□ 1.98
BRD3-202ENST00000371834 A0A0D9SFI3 127 aa27.4■■□□□ 1.98
BRD3-202ENST00000371834 ZNF496Q96IT1 587 aaPredicted RBP27.4■■□□□ 1.98
BRD3-202ENST00000371834 NOL7Q9UMY1 257 aaKnown RBP27.4■■□□□ 1.98
BRD3-202ENST00000371834 C1orf167Q5SNV9 1468 aa27.4■■□□□ 1.98
BRD3-202ENST00000371834 PHKG2P15735 406 aa27.39■■□□□ 1.98
BRD3-202ENST00000371834 GCKRQ14397 625 aa27.39■■□□□ 1.98
BRD3-202ENST00000371834 NECAB1Q8N987 351 aa27.39■■□□□ 1.98
BRD3-202ENST00000371834 NEXNQ0ZGT2 675 aa27.39■■□□□ 1.97
BRD3-202ENST00000371834 ME3Q16798 604 aa27.39■■□□□ 1.97
BRD3-202ENST00000371834 ZKSCAN1P17029 563 aaPredicted RBP27.38■■□□□ 1.97
BRD3-202ENST00000371834 MAP4K1Q92918 833 aa27.38■■□□□ 1.97
BRD3-202ENST00000371834 FIBPO43427 364 aa27.38■■□□□ 1.97
BRD3-202ENST00000371834 FSD1Q9BTV5 496 aa27.38■■□□□ 1.97
BRD3-202ENST00000371834 USP16Q9Y5T5 823 aa27.37■■□□□ 1.97
BRD3-202ENST00000371834 TATP17735 454 aaPredicted RBP27.37■■□□□ 1.97
BRD3-202ENST00000371834 METTL22Q9BUU2 404 aaPredicted RBP27.37■■□□□ 1.97
BRD3-202ENST00000371834 SLC27A2O14975 620 aa27.36■■□□□ 1.97
BRD3-202ENST00000371834 PHF14O94880 888 aa27.36■■□□□ 1.97
BRD3-202ENST00000371834 EDC3Q96F86 508 aaKnown RBP27.36■■□□□ 1.97
BRD3-202ENST00000371834 MTMR6Q9Y217 621 aa27.36■■□□□ 1.97
BRD3-202ENST00000371834 TAF6LQ9Y6J9 622 aa27.36■■□□□ 1.97
BRD3-202ENST00000371834 ZSCAN31Q96LW9 406 aaPredicted RBP27.36■■□□□ 1.97
BRD3-202ENST00000371834 TPCN1Q9ULQ1 816 aa27.36■■□□□ 1.97
BRD3-202ENST00000371834 HIP1O00291 1037 aa27.35■■□□□ 1.97
BRD3-202ENST00000371834 MEGF6O75095 1541 aa27.35■■□□□ 1.97
BRD3-202ENST00000371834 LMTK3Q96Q04 1460 aa27.35■■□□□ 1.97
BRD3-202ENST00000371834 TCEANC2Q96MN5 208 aa27.35■■□□□ 1.97
BRD3-202ENST00000371834 SH2B1Q9NRF2 756 aaPredicted RBP27.35■■□□□ 1.97
BRD3-202ENST00000371834 SCN11AQ9UI33 1791 aa27.34■■□□□ 1.97
BRD3-202ENST00000371834 DNM1Q05193 864 aaKnown RBP27.34■■□□□ 1.97
BRD3-202ENST00000371834 CABLES1Q8TDN4 633 aa27.34■■□□□ 1.97
BRD3-202ENST00000371834 C19orf44Q9H6X5 657 aa27.34■■□□□ 1.97
BRD3-202ENST00000371834 UBE2HP62256 183 aa27.33■■□□□ 1.97
BRD3-202ENST00000371834 CCDC183Q5T5S1 534 aa27.33■■□□□ 1.97
BRD3-202ENST00000371834 ANKRD13DQ6ZTN6 518 aa27.33■■□□□ 1.97
BRD3-202ENST00000371834 LRP10Q7Z4F1 713 aa27.33■■□□□ 1.97
BRD3-202ENST00000371834 ZNF589Q86UQ0 364 aaPredicted RBP27.33■■□□□ 1.97
BRD3-202ENST00000371834 OFD1O75665 1012 aa27.33■■□□□ 1.97
BRD3-202ENST00000371834 CSB-PGBD3P0DP91 1061 aa27.33■■□□□ 1.97
BRD3-202ENST00000371834 VPS37CA5D8V6 355 aaPredicted RBP27.32■■□□□ 1.96
BRD3-202ENST00000371834 SNRKQ9NRH2 765 aa27.32■■□□□ 1.96
BRD3-202ENST00000371834 ZKSCAN5Q9Y2L8 839 aa27.32■■□□□ 1.96
BRD3-202ENST00000371834 ATP6V1DQ9Y5K8 247 aa27.32■■□□□ 1.96
BRD3-202ENST00000371834 ADAMTSL3P82987 1691 aa27.31■■□□□ 1.96
BRD3-202ENST00000371834 CHRNA2Q15822 529 aa27.31■■□□□ 1.96
BRD3-202ENST00000371834 IFNL2Q8IZJ0 200 aa27.31■■□□□ 1.96
BRD3-202ENST00000371834 NDUFB9Q9Y6M9 179 aa27.31■■□□□ 1.96
BRD3-202ENST00000371834 ALS2Q96Q42 1657 aa27.31■■□□□ 1.96
BRD3-202ENST00000371834 MED23Q9ULK4 1368 aa27.3■■□□□ 1.96
BRD3-202ENST00000371834 KIF1AQ12756 1690 aa27.3■■□□□ 1.96
BRD3-202ENST00000371834 ATP5J2-PTCD1G3V325 749 aa27.3■■□□□ 1.96
BRD3-202ENST00000371834 CYP27B1O15528 508 aa27.3■■□□□ 1.96
BRD3-202ENST00000371834 PTCD1O75127 700 aaKnown RBP27.3■■□□□ 1.96
BRD3-202ENST00000371834 TTC5Q8N0Z6 440 aa27.3■■□□□ 1.96
BRD3-202ENST00000371834 CCDC39Q9UFE4 941 aa27.3■■□□□ 1.96
BRD3-202ENST00000371834 SNRPA1P09661 255 aaKnown RBP27.29■■□□□ 1.96
BRD3-202ENST00000371834 UBE3BQ7Z3V4 1068 aa27.29■■□□□ 1.96
BRD3-202ENST00000371834 DBNLQ9UJU6 430 aaKnown RBP27.29■■□□□ 1.96
BRD3-202ENST00000371834 ZNF500O60304 480 aaPredicted RBP27.29■■□□□ 1.96
BRD3-202ENST00000371834 RFX5P48382 616 aaPredicted RBP27.29■■□□□ 1.96
BRD3-202ENST00000371834 TFCP2Q12800 502 aa27.29■■□□□ 1.96
BRD3-202ENST00000371834 PSMA5P28066 241 aa27.28■■□□□ 1.96
BRD3-202ENST00000371834 PTPN12Q05209 780 aaKnown RBP27.28■■□□□ 1.96
BRD3-202ENST00000371834 COPRSQ9NQ92 184 aa27.28■■□□□ 1.96
BRD3-202ENST00000371834 MRC1P22897 1456 aa27.28■■□□□ 1.96
BRD3-202ENST00000371834 CHGBP05060 677 aa27.28■■□□□ 1.96
BRD3-202ENST00000371834 BLOC1S2Q6QNY1 142 aa27.28■■□□□ 1.96
BRD3-202ENST00000371834 MST1RQ04912 1400 aa27.28■■□□□ 1.96
BRD3-202ENST00000371834 HCLS1P14317 486 aaPredicted RBP27.26■■□□□ 1.95
BRD3-202ENST00000371834 TNNI3KQ59H18 835 aa27.26■■□□□ 1.95
BRD3-202ENST00000371834 FPGT-TNNI3KV9GXZ4 949 aa27.26■■□□□ 1.95
BRD3-202ENST00000371834 RNF20Q5VTR2 975 aa27.26■■□□□ 1.95
BRD3-202ENST00000371834 LARP1BQ659C4 914 aaKnown RBP27.26■■□□□ 1.95
BRD3-202ENST00000371834 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.26■■□□□ 1.95
BRD3-202ENST00000371834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.26■■□□□ 1.958e-7■■□□□ 13.6
BRD3-202ENST00000371834 RPS6KB1P23443 525 aa27.25■■□□□ 1.95
BRD3-202ENST00000371834 DCAF5Q96JK2 942 aa27.25■■□□□ 1.95
BRD3-202ENST00000371834 TAF5LO75529 589 aa27.25■■□□□ 1.95
BRD3-202ENST00000371834 PTMAP06454 111 aaKnown RBP27.25■■□□□ 1.95
BRD3-202ENST00000371834 FERMT3Q86UX7 667 aa27.25■■□□□ 1.95
BRD3-202ENST00000371834 FMNL2Q96PY5 1086 aa27.25■■□□□ 1.95
BRD3-202ENST00000371834 COL15A1P39059 1388 aa27.25■■□□□ 1.95
BRD3-202ENST00000371834 TOB2Q14106 344 aaPredicted RBP27.24■■□□□ 1.95
BRD3-202ENST00000371834 GIMAP6Q6P9H5 292 aa27.24■■□□□ 1.95
BRD3-202ENST00000371834 CDC37L1Q7L3B6 337 aa27.24■■□□□ 1.95
BRD3-202ENST00000371834 MPNDQ8N594 471 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms