RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 NRXN2Q9P2S2 1712 aa16.52■□□□□ 0.24
TTC39A-204ENST00000371750 DDR1Q08345 913 aa16.52■□□□□ 0.23
TTC39A-204ENST00000371750 TRIM28Q13263 835 aaKnown RBP16.52■□□□□ 0.23
TTC39A-204ENST00000371750 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.23
TTC39A-204ENST00000371750 GTF3C3Q9Y5Q9 886 aa16.52■□□□□ 0.23
TTC39A-204ENST00000371750 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
TTC39A-204ENST00000371750 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
TTC39A-204ENST00000371750 PARP10Q53GL7 1025 aa16.51■□□□□ 0.23
TTC39A-204ENST00000371750 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
TTC39A-204ENST00000371750 SETDB2Q96T68 719 aa16.51■□□□□ 0.23
TTC39A-204ENST00000371750 MEIS3Q99687 375 aa16.51■□□□□ 0.23
TTC39A-204ENST00000371750 ZBTB7AO95365 584 aa16.5■□□□□ 0.23
TTC39A-204ENST00000371750 NLGN1Q8N2Q7 840 aa16.5■□□□□ 0.23
TTC39A-204ENST00000371750 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
TTC39A-204ENST00000371750 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
TTC39A-204ENST00000371750 NTSR2O95665 410 aa16.5■□□□□ 0.23
TTC39A-204ENST00000371750 TM4SF1P30408 202 aa16.5■□□□□ 0.23
TTC39A-204ENST00000371750 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
TTC39A-204ENST00000371750 DDX19BQ9UMR2 479 aa16.5■□□□□ 0.23
TTC39A-204ENST00000371750 GRM8O00222 908 aa16.49■□□□□ 0.23
TTC39A-204ENST00000371750 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
TTC39A-204ENST00000371750 MMP10P09238 476 aa16.49■□□□□ 0.23
TTC39A-204ENST00000371750 RTL5Q5HYW3 569 aaPredicted RBP16.49■□□□□ 0.23
TTC39A-204ENST00000371750 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
TTC39A-204ENST00000371750 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
TTC39A-204ENST00000371750 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
TTC39A-204ENST00000371750 NBPF7P0C2Y1 421 aaPredicted RBP16.48■□□□□ 0.23
TTC39A-204ENST00000371750 UBE3BQ7Z3V4 1068 aa16.48■□□□□ 0.23
TTC39A-204ENST00000371750 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
TTC39A-204ENST00000371750 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
TTC39A-204ENST00000371750 NUTM1Q86Y26 1132 aa16.48■□□□□ 0.23
TTC39A-204ENST00000371750 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
TTC39A-204ENST00000371750 TRMT112Q9UI30 125 aaKnown RBP16.48■□□□□ 0.23
TTC39A-204ENST00000371750 UTYO14607 1347 aa16.47■□□□□ 0.23
TTC39A-204ENST00000371750 ZBTB7BO15156 539 aaPredicted RBP16.47■□□□□ 0.23
TTC39A-204ENST00000371750 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
TTC39A-204ENST00000371750 NEFLP07196 543 aa16.47■□□□□ 0.23
TTC39A-204ENST00000371750 CASP7P55210 303 aa16.47■□□□□ 0.23
TTC39A-204ENST00000371750 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
TTC39A-204ENST00000371750 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
TTC39A-204ENST00000371750 FAM89AQ96GI7 184 aa16.47■□□□□ 0.23
TTC39A-204ENST00000371750 MTFR1LQ9H019 292 aa16.47■□□□□ 0.23
TTC39A-204ENST00000371750 ZBTB38Q8NAP3 1195 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-204ENST00000371750 ANKRD31Q8N7Z5 1873 aa16.46■□□□□ 0.23
TTC39A-204ENST00000371750 H7C1W4 665 aa16.46■□□□□ 0.23
TTC39A-204ENST00000371750 SERPINB2P05120 415 aa16.46■□□□□ 0.23
TTC39A-204ENST00000371750 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
TTC39A-204ENST00000371750 C1orf115Q9H7X2 142 aa16.46■□□□□ 0.23
TTC39A-204ENST00000371750 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-204ENST00000371750 MYH3P11055 1940 aa16.46■□□□□ 0.22
TTC39A-204ENST00000371750 SH3TC1Q8TE82 1336 aa16.46■□□□□ 0.22
TTC39A-204ENST00000371750 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
TTC39A-204ENST00000371750 ERFEQ4G0M1 354 aa16.45■□□□□ 0.22
TTC39A-204ENST00000371750 PRR5LQ6MZQ0 368 aa16.45■□□□□ 0.22
TTC39A-204ENST00000371750 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
TTC39A-204ENST00000371750 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
TTC39A-204ENST00000371750 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
TTC39A-204ENST00000371750 PARP3Q9Y6F1 533 aa16.45■□□□□ 0.22
TTC39A-204ENST00000371750 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
TTC39A-204ENST00000371750 GNAI3P08754 354 aa16.45■□□□□ 0.22
TTC39A-204ENST00000371750 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
TTC39A-204ENST00000371750 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
TTC39A-204ENST00000371750 NPHP1O15259 732 aa16.43■□□□□ 0.22
TTC39A-204ENST00000371750 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-204ENST00000371750 RIC1Q4ADV7 1423 aa16.43■□□□□ 0.22
TTC39A-204ENST00000371750 IRS4O14654 1257 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-204ENST00000371750 GTF2E1P29083 439 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-204ENST00000371750 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
TTC39A-204ENST00000371750 KAZALD1Q96I82 304 aa16.43■□□□□ 0.22
TTC39A-204ENST00000371750 HCLS1P14317 486 aaPredicted RBP16.42■□□□□ 0.22
TTC39A-204ENST00000371750 EPHA10Q5JZY3 1008 aa16.42■□□□□ 0.22
TTC39A-204ENST00000371750 C10orf71Q711Q0 1435 aa16.42■□□□□ 0.22
TTC39A-204ENST00000371750 GNAI2P04899 355 aa16.41■□□□□ 0.22
TTC39A-204ENST00000371750 ST5P78524 1137 aa16.41■□□□□ 0.22
TTC39A-204ENST00000371750 C3orf67Q6ZVT6 689 aa16.41■□□□□ 0.22
TTC39A-204ENST00000371750 SGIP1Q9BQI5 828 aa16.41■□□□□ 0.22
TTC39A-204ENST00000371750 CHMP4BQ9H444 224 aaKnown RBP16.41■□□□□ 0.22
TTC39A-204ENST00000371750 BICC1Q9H694 974 aaKnown RBP16.41■□□□□ 0.22
TTC39A-204ENST00000371750 KIF13BQ9NQT8 1826 aa16.4■□□□□ 0.22
TTC39A-204ENST00000371750 POLD1P28340 1107 aa16.4■□□□□ 0.22
TTC39A-204ENST00000371750 PTGER2P43116 358 aa16.4■□□□□ 0.22
TTC39A-204ENST00000371750 FOXO4P98177 505 aa16.4■□□□□ 0.22
TTC39A-204ENST00000371750 ANKRD44Q8N8A2 993 aa16.4■□□□□ 0.22
TTC39A-204ENST00000371750 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
TTC39A-204ENST00000371750 COL4A1P02462 1669 aa16.39■□□□□ 0.21
TTC39A-204ENST00000371750 KIAA1551Q9HCM1 1747 aa16.39■□□□□ 0.21
TTC39A-204ENST00000371750 PDE8AO60658 829 aa16.38■□□□□ 0.21
TTC39A-204ENST00000371750 CTSWP56202 376 aa16.38■□□□□ 0.21
TTC39A-204ENST00000371750 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
TTC39A-204ENST00000371750 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
TTC39A-204ENST00000371750 CCDC85AQ96PX6 553 aaPredicted RBP16.38■□□□□ 0.21
TTC39A-204ENST00000371750 RABL6Q3YEC7 729 aaPredicted RBP16.37■□□□□ 0.21
TTC39A-204ENST00000371750 SPON1Q9HCB6 807 aa16.37■□□□□ 0.21
TTC39A-204ENST00000371750 PCDHB15Q9Y5E8 787 aa16.37■□□□□ 0.21
TTC39A-204ENST00000371750 SPEF2Q9C093 1822 aa16.37■□□□□ 0.21
TTC39A-204ENST00000371750 LRP5O75197 1615 aa16.37■□□□□ 0.21
TTC39A-204ENST00000371750 FAM161AQ3B820 660 aa16.36■□□□□ 0.21
TTC39A-204ENST00000371750 LMBR1LQ6UX01 489 aa16.36■□□□□ 0.21
TTC39A-204ENST00000371750 HDAC5Q9UQL6 1122 aa16.36■□□□□ 0.21
TTC39A-204ENST00000371750 DLEC1Q9Y238 1755 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms