RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ANKRD36BQ8N2N9 1353 aa13.61□□□□□ -0.23
PTPN1-201ENST00000371621 GNAI3P08754 354 aa13.61□□□□□ -0.23
PTPN1-201ENST00000371621 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
PTPN1-201ENST00000371621 BLMP54132 1417 aaPredicted RBP13.61□□□□□ -0.23
PTPN1-201ENST00000371621 NPHP3Q7Z494 1330 aa13.61□□□□□ -0.23
PTPN1-201ENST00000371621 GCKP35557 465 aa13.61□□□□□ -0.23
PTPN1-201ENST00000371621 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
PTPN1-201ENST00000371621 TTC19Q6DKK2 380 aaPredicted RBP13.61□□□□□ -0.23
PTPN1-201ENST00000371621 RAD50Q92878 1312 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 TAX1BP1Q86VP1 789 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 GOLGA6L10A6NI86 522 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 NDUFAB1O14561 156 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 CCT5P48643 541 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 MAP9Q49MG5 647 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 CCDC181Q5TID7 509 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 CCDC114Q96M63 670 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
PTPN1-201ENST00000371621 CTAGE15A4D2H0 777 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 RPSAP08865 295 aaKnown RBP13.59□□□□□ -0.23
PTPN1-201ENST00000371621 CTAGE8P0CG41 777 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 FILIP1LQ4L180 1135 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 CTAGE6Q86UF2 777 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 CTAGE4Q8IX94 777 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 CCDC148Q8NFR7 591 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 CXorf56Q9H5V9 222 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 BRMS1Q9HCU9 246 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
PTPN1-201ENST00000371621 FBXO18Q8NFZ0 1043 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 TEX14Q8IWB6 1497 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 A0A1B0GUA9 196 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 TRIM29Q14134 588 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 LMOD2Q6P5Q4 547 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 AFAP1L1Q8TED9 768 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 CAPZA3Q96KX2 299 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 ZNF521Q96K83 1311 aa13.59□□□□□ -0.23
PTPN1-201ENST00000371621 CTAGE5O15320 804 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 NR1I2O75469 434 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 ZNF569Q5MCW4 686 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 WWC2Q6AWC2 1192 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 SUFUQ9UMX1 484 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 CAMSAP2Q08AD1 1489 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.24
PTPN1-201ENST00000371621 G3BP1Q13283 466 aaKnown RBP eCLIP13.58□□□□□ -0.242e-10■■□□□ 14.4
PTPN1-201ENST00000371621 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.58□□□□□ -0.24
PTPN1-201ENST00000371621 CHMP4BP1P59074 171 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 ANKRD1Q15327 319 aa13.58□□□□□ -0.24
PTPN1-201ENST00000371621 LRRFIP1Q32MZ4 808 aaKnown RBP13.58□□□□□ -0.24
PTPN1-201ENST00000371621 RRP12Q5JTH9 1297 aaKnown RBP13.58□□□□□ -0.24
PTPN1-201ENST00000371621 TRMT2AQ8IZ69 625 aaKnown RBP13.58□□□□□ -0.24
PTPN1-201ENST00000371621 CAVIN2O95810 425 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 MAGEA9P43362 315 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.57□□□□□ -0.24
PTPN1-201ENST00000371621 SRLQ86TD4 932 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 CNNM3Q8NE01 707 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 MRVI1Q9Y6F6 885 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 TTC6Q86TZ1 520 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 BICC1Q9H694 974 aaKnown RBP13.57□□□□□ -0.24
PTPN1-201ENST00000371621 GOLGA8FQ08AF8 430 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 GOLGA8DPQ0D2H9 430 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 MCTP2Q6DN12 878 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 COG3Q96JB2 828 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 HYPKQ9NX55 129 aa13.57□□□□□ -0.24
PTPN1-201ENST00000371621 CTIFO43310 598 aaKnown RBP13.56□□□□□ -0.24
PTPN1-201ENST00000371621 CCDC144BQ3MJ40 725 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 RAB11FIP4Q86YS3 637 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 CCDC144CPQ8IYA2 1237 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
PTPN1-201ENST00000371621 A0A1B0GVL5 298 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 RBM6P78332 1123 aaKnown RBP13.56□□□□□ -0.24
PTPN1-201ENST00000371621 E2F5Q15329 346 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 KRT24Q2M2I5 525 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 BCAS4Q8TDM0 211 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 BRF1Q92994 677 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 CARD14Q9BXL6 1004 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 XPO4Q9C0E2 1151 aaKnown RBP13.56□□□□□ -0.24
PTPN1-201ENST00000371621 LCMT1Q9UIC8 334 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 KDM6BO15054 1643 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 SYCP1Q15431 976 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 LONRF2Q1L5Z9 754 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 MICALCLQ6ZW33 695 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 PRPF38AQ8NAV1 312 aaKnown RBP13.56□□□□□ -0.24
PTPN1-201ENST00000371621 FAM76AQ8TAV0 307 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
PTPN1-201ENST00000371621 SAMM50Q9Y512 469 aa13.56□□□□□ -0.24
PTPN1-201ENST00000371621 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
PTPN1-201ENST00000371621 CPLX2Q6PUV4 134 aaKnown RBP13.55□□□□□ -0.24
PTPN1-201ENST00000371621 CDC37L1Q7L3B6 337 aa13.55□□□□□ -0.24
PTPN1-201ENST00000371621 MCM10Q7L590 875 aa13.55□□□□□ -0.24
PTPN1-201ENST00000371621 KIAA1328Q86T90 577 aa13.55□□□□□ -0.24
PTPN1-201ENST00000371621 MICAL1Q8TDZ2 1067 aa13.55□□□□□ -0.24
PTPN1-201ENST00000371621 GEMIN8Q9NWZ8 242 aaKnown RBP13.55□□□□□ -0.24
PTPN1-201ENST00000371621 CHMLP26374 656 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms