RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 UPF2Q9HAU5 1272 aaKnown RBP21.6■■□□□ 1.05
SSBP3-203ENST00000371319 SBF2Q86WG5 1849 aa21.59■■□□□ 1.05
SSBP3-203ENST00000371319 CRKLP46109 303 aaKnown RBP21.59■■□□□ 1.05
SSBP3-203ENST00000371319 TSHZ3Q63HK5 1081 aa21.59■■□□□ 1.05
SSBP3-203ENST00000371319 NUTM1Q86Y26 1132 aa21.59■■□□□ 1.05
SSBP3-203ENST00000371319 ERC1Q8IUD2 1116 aa21.59■■□□□ 1.05
SSBP3-203ENST00000371319 EIF5P55010 431 aaKnown RBP21.58■■□□□ 1.05
SSBP3-203ENST00000371319 PTF1AQ7RTS3 328 aa21.58■■□□□ 1.05
SSBP3-203ENST00000371319 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.05
SSBP3-203ENST00000371319 ERVV-1B6SEH8 477 aa21.57■■□□□ 1.04
SSBP3-203ENST00000371319 SASH1O94885 1247 aa21.57■■□□□ 1.04
SSBP3-203ENST00000371319 COPRSQ9NQ92 184 aa21.57■■□□□ 1.04
SSBP3-203ENST00000371319 USP42Q9H9J4 1324 aaKnown RBP21.57■■□□□ 1.04
SSBP3-203ENST00000371319 G3BP1Q13283 466 aaKnown RBP eCLIP21.57■■□□□ 1.04
SSBP3-203ENST00000371319 DZIP3Q86Y13 1208 aaKnown RBP21.57■■□□□ 1.04
SSBP3-203ENST00000371319 KLHDC4Q8TBB5 520 aa21.57■■□□□ 1.04
SSBP3-203ENST00000371319 HSP90AB3PQ58FF7 597 aa21.56■■□□□ 1.04
SSBP3-203ENST00000371319 LMBR1LQ6UX01 489 aa21.56■■□□□ 1.04
SSBP3-203ENST00000371319 ARXQ96QS3 562 aa21.56■■□□□ 1.04
SSBP3-203ENST00000371319 PCCAP05165 728 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-203ENST00000371319 PTPN12Q05209 780 aaKnown RBP21.55■■□□□ 1.04
SSBP3-203ENST00000371319 RTL5Q5HYW3 569 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-203ENST00000371319 TBC1D2BQ9UPU7 963 aa21.55■■□□□ 1.04
SSBP3-203ENST00000371319 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.55■■□□□ 1.04
SSBP3-203ENST00000371319 FAM182BQ5T319 152 aa21.54■■□□□ 1.04
SSBP3-203ENST00000371319 NLRP10Q86W26 655 aa21.54■■□□□ 1.04
SSBP3-203ENST00000371319 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
SSBP3-203ENST00000371319 C22orf23Q9BZE7 217 aa21.54■■□□□ 1.04
SSBP3-203ENST00000371319 SIL1Q9H173 461 aa21.54■■□□□ 1.04
SSBP3-203ENST00000371319 CLASRPQ8N2M8 674 aaKnown RBP21.53■■□□□ 1.04
SSBP3-203ENST00000371319 LINC00116Q8NCU8 138 aa21.53■■□□□ 1.04
SSBP3-203ENST00000371319 PI4K2BQ8TCG2 481 aa21.53■■□□□ 1.04
SSBP3-203ENST00000371319 QTRT2Q9H974 415 aaKnown RBP21.53■■□□□ 1.04
SSBP3-203ENST00000371319 BCORQ6W2J9 1755 aa21.53■■□□□ 1.04
SSBP3-203ENST00000371319 LY75O60449 1722 aa21.53■■□□□ 1.04
SSBP3-203ENST00000371319 ZBTB38Q8NAP3 1195 aaPredicted RBP21.53■■□□□ 1.04
SSBP3-203ENST00000371319 PLA2G12BQ9BX93 195 aa21.53■■□□□ 1.04
SSBP3-203ENST00000371319 ZNF34Q8IZ26 560 aa21.52■■□□□ 1.04
SSBP3-203ENST00000371319 GPTP24298 496 aa21.51■■□□□ 1.03
SSBP3-203ENST00000371319 TTC41PQ6P2S7 1318 aa21.51■■□□□ 1.03
SSBP3-203ENST00000371319 CDHR2Q9BYE9 1310 aa21.51■■□□□ 1.03
SSBP3-203ENST00000371319 AK9Q5TCS8 1911 aa21.51■■□□□ 1.03
SSBP3-203ENST00000371319 CAMTA2O94983 1202 aa21.5■■□□□ 1.03
SSBP3-203ENST00000371319 FAM89AQ96GI7 184 aa21.5■■□□□ 1.03
SSBP3-203ENST00000371319 BRWD3Q6RI45 1802 aa21.5■■□□□ 1.03
SSBP3-203ENST00000371319 AACSQ86V21 672 aa21.49■■□□□ 1.03
SSBP3-203ENST00000371319 EAF2Q96CJ1 260 aaPredicted RBP21.49■■□□□ 1.03
SSBP3-203ENST00000371319 UBN2Q6ZU65 1347 aa21.49■■□□□ 1.03
SSBP3-203ENST00000371319 IFIT2P09913 472 aaKnown RBP21.48■■□□□ 1.03
SSBP3-203ENST00000371319 RBM25P49756 843 aaKnown RBP21.48■■□□□ 1.03
SSBP3-203ENST00000371319 CHMP3Q9Y3E7 222 aa21.48■■□□□ 1.03
SSBP3-203ENST00000371319 CNTNAP4Q9C0A0 1308 aa21.48■■□□□ 1.03
SSBP3-203ENST00000371319 TAF1LQ8IZX4 1826 aa21.48■■□□□ 1.03
SSBP3-203ENST00000371319 MYH3P11055 1940 aa21.48■■□□□ 1.03
SSBP3-203ENST00000371319 KCNQ4P56696 695 aa21.48■■□□□ 1.03
SSBP3-203ENST00000371319 EIF5BO60841 1220 aaKnown RBP21.47■■□□□ 1.03
SSBP3-203ENST00000371319 CASC1Q6TDU7 716 aa21.47■■□□□ 1.03
SSBP3-203ENST00000371319 SYNE4Q8N205 404 aa21.47■■□□□ 1.03
SSBP3-203ENST00000371319 TRIM6-TRIM34B2RNG4 842 aa21.46■■□□□ 1.03
SSBP3-203ENST00000371319 CSF1RP07333 972 aa21.46■■□□□ 1.03
SSBP3-203ENST00000371319 TFCP2Q12800 502 aa21.46■■□□□ 1.03
SSBP3-203ENST00000371319 RILPL2Q969X0 211 aa21.46■■□□□ 1.03
SSBP3-203ENST00000371319 ECHDC1Q9NTX5 307 aa21.46■■□□□ 1.03
SSBP3-203ENST00000371319 GLRX3O76003 335 aaKnown RBP21.45■■□□□ 1.02
SSBP3-203ENST00000371319 ATG9AQ7Z3C6 839 aa21.45■■□□□ 1.02
SSBP3-203ENST00000371319 CCDC8Q9H0W5 538 aaPredicted RBP21.45■■□□□ 1.02
SSBP3-203ENST00000371319 TLR7Q9NYK1 1049 aaKnown RBP21.45■■□□□ 1.02
SSBP3-203ENST00000371319 SCN7AQ01118 1682 aa21.45■■□□□ 1.02
SSBP3-203ENST00000371319 RC3H1Q5TC82 1133 aaKnown RBP21.44■■□□□ 1.02
SSBP3-203ENST00000371319 GPATCH3Q96I76 525 aa21.44■■□□□ 1.02
SSBP3-203ENST00000371319 ERC2O15083 957 aa21.44■■□□□ 1.02
SSBP3-203ENST00000371319 MAP4K4O95819 1239 aaPredicted RBP21.44■■□□□ 1.02
SSBP3-203ENST00000371319 CHMLP26374 656 aa21.44■■□□□ 1.02
SSBP3-203ENST00000371319 TNNI3KQ59H18 835 aa21.44■■□□□ 1.02
SSBP3-203ENST00000371319 ZNF594Q96JF6 807 aaPredicted RBP21.44■■□□□ 1.02
SSBP3-203ENST00000371319 TRMT112Q9UI30 125 aaKnown RBP21.44■■□□□ 1.02
SSBP3-203ENST00000371319 FPGT-TNNI3KV9GXZ4 949 aa21.44■■□□□ 1.02
SSBP3-203ENST00000371319 LAMB2P55268 1798 aa21.43■■□□□ 1.02
SSBP3-203ENST00000371319 DDX60Q8IY21 1712 aaKnown RBP21.42■■□□□ 1.02
SSBP3-203ENST00000371319 EYA2O00167 538 aa21.42■■□□□ 1.02
SSBP3-203ENST00000371319 IRS4O14654 1257 aaPredicted RBP21.42■■□□□ 1.02
SSBP3-203ENST00000371319 CIAO1O76071 339 aa21.42■■□□□ 1.02
SSBP3-203ENST00000371319 SUSD4Q5VX71 490 aa21.42■■□□□ 1.02
SSBP3-203ENST00000371319 CCNL1Q9UK58 526 aaPredicted RBP21.42■■□□□ 1.02
SSBP3-203ENST00000371319 IL15P40933 162 aaPredicted RBP21.41■■□□□ 1.02
SSBP3-203ENST00000371319 SLC4A3P48751 1232 aa21.41■■□□□ 1.02
SSBP3-203ENST00000371319 CTSWP56202 376 aa21.41■■□□□ 1.02
SSBP3-203ENST00000371319 LRRC24Q50LG9 513 aa21.41■■□□□ 1.02
SSBP3-203ENST00000371319 ESYT1Q9BSJ8 1104 aa21.41■■□□□ 1.02
SSBP3-203ENST00000371319 USP26Q9BXU7 913 aa21.41■■□□□ 1.02
SSBP3-203ENST00000371319 BCL11BQ9C0K0 894 aaPredicted RBP21.41■■□□□ 1.02
SSBP3-203ENST00000371319 CCDC57Q2TAC2 916 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 PARP10Q53GL7 1025 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 CNTROBQ8N137 903 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 TTLL11Q8NHH1 800 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 C4BP0C0L5 1744 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 PDE8AO60658 829 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 RPS6KA4O75676 772 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 KIF2CQ99661 725 aa21.4■■□□□ 1.02
SSBP3-203ENST00000371319 PUS3Q9BZE2 481 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms