RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ERICH2A1L162 156 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 HCLS1P14317 486 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 CCT2P78371 535 aaKnown RBP8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 GUCY1B3Q02153 619 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 FAM227BQ96M60 508 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 LIMCH1Q9UPQ0 1083 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 MED14O60244 1454 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 ANKARQ7Z5J8 1434 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 RBM25P49756 843 aaKnown RBP8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 KCNQ4P56696 695 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 FAM182BQ5T319 152 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 AIDAQ96BJ3 306 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 EAF2Q96CJ1 260 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 SPATA31D1Q6ZQQ2 1576 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 USP31Q70CQ4 1352 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 IRS4O14654 1257 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 TRIM29Q14134 588 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 SPATA31A3Q5VYP0 1347 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 RICTORQ6R327 1708 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 NASPP49321 788 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 CREBRFQ8IUR6 639 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 NOL10Q9BSC4 688 aaKnown RBP8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 ZNF652Q9Y2D9 606 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 OVOS2A0A0J9YW53 1432 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 OVOS2Q6IE36 1432 aa8.47□□□□□ -1.05
TGFBR3-202ENST00000370399 ZC3H13Q5T200 1668 aaKnown RBP8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 PDCP20941 246 aa8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 TDO2P48775 406 aa8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 CCDC129Q6ZRS4 1044 aa8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 CHST3Q7LGC8 479 aa8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 BAG4O95429 457 aaKnown RBP8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 IL15P40933 162 aaPredicted RBP8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 ATP2B3Q16720 1220 aa8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 RASSF8Q8NHQ8 419 aa8.46□□□□□ -1.05
TGFBR3-202ENST00000370399 MINDY4BA8MYZ0 360 aa8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 MRE11P49959 708 aa8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 ANKRD1Q15327 319 aa8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 DLC1Q96QB1 1528 aa8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 GLIPR1L2Q4G1C9 344 aa8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 NUP133Q8WUM0 1156 aa8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 GNL3LQ9NVN8 582 aaKnown RBP8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 U3KPZ7 1027 aaPredicted RBP8.46□□□□□ -1.06
TGFBR3-202ENST00000370399 WDR17Q8IZU2 1322 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 DHX16O60231 1041 aaKnown RBP8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 KRT32Q14532 448 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 IMMTQ16891 758 aaKnown RBP8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 SLC4A8Q2Y0W8 1093 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 SNX21Q969T3 373 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 A0A1B0GUL7 405 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 CD2BP2O95400 341 aaKnown RBP8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 PIBF1Q8WXW3 757 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 PALD1Q9ULE6 856 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 TECPR2O15040 1411 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 TTC41PQ6P2S7 1318 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 SYCE3A1L190 88 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 TNNI3KQ59H18 835 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 BRF1Q92994 677 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 FPGT-TNNI3KV9GXZ4 949 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 KIF24Q5T7B8 1368 aa8.45□□□□□ -1.06
TGFBR3-202ENST00000370399 BECN2A8MW95 431 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 KIAA2012Q0VF49 1180 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 NEK1Q96PY6 1258 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 TLR7Q9NYK1 1049 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 ERVV-2B6SEH9 535 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 MBD3O95983 291 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 GJB2P29033 226 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 AK2P54819 239 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 ZSCAN31Q96LW9 406 aaPredicted RBP8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 PAG1Q9NWQ8 432 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.44□□□□□ -1.061e-7■■■■□ 19.9
TGFBR3-202ENST00000370399 CTNNA3Q9UI47 895 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 PTCH1Q13635 1447 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 SAMD1Q6SPF0 538 aaPredicted RBP8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 SDF4Q9BRK5 362 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 NACAP1Q9BZK3 213 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 GRPEL1Q9HAV7 217 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 ANKIB1Q9P2G1 1089 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 RBM27Q9P2N5 1060 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 SIGLEC1Q9BZZ2 1709 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 EYA2O00167 538 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 ZNF213O14771 459 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 SLC9C2Q5TAH2 1124 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 ZSCAN25Q6NSZ9 544 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 CCDC144CPQ8IYA2 1237 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 CCDC191Q8NCU4 936 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 NAPBQ9H115 298 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 JAG2Q9Y219 1238 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 CDC42BPGQ6DT37 1551 aa8.44□□□□□ -1.06
TGFBR3-202ENST00000370399 SGSM2O43147 1006 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 SLC5A1P13866 664 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 ITGA6P23229 1130 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 KRT85P78386 507 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 SART3Q15020 963 aaKnown RBP8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 NBPF5PQ86XG9 351 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms