RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
TWNK-202ENST00000370228 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
TWNK-202ENST00000370228 KCNQ3O43525 872 aa13□□□□□ -0.33
TWNK-202ENST00000370228 CYP2C19P33261 490 aa13□□□□□ -0.33
TWNK-202ENST00000370228 NFE2L2Q16236 605 aa13□□□□□ -0.33
TWNK-202ENST00000370228 MNS1Q8NEH6 495 aa13□□□□□ -0.33
TWNK-202ENST00000370228 RBM28Q9NW13 759 aaKnown RBP13□□□□□ -0.33
TWNK-202ENST00000370228 PDZRN3Q9UPQ7 1066 aa13□□□□□ -0.33
TWNK-202ENST00000370228 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
TWNK-202ENST00000370228 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
TWNK-202ENST00000370228 NOLC1Q14978 699 aaKnown RBP eCLIP12.99□□□□□ -0.33
TWNK-202ENST00000370228 KLHL40Q2TBA0 621 aa12.99□□□□□ -0.33
TWNK-202ENST00000370228 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
TWNK-202ENST00000370228 KRT222Q8N1A0 295 aa12.99□□□□□ -0.33
TWNK-202ENST00000370228 SHPRHQ149N8 1683 aa12.99□□□□□ -0.33
TWNK-202ENST00000370228 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
TWNK-202ENST00000370228 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
TWNK-202ENST00000370228 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
TWNK-202ENST00000370228 ZKSCAN8Q15776 578 aaPredicted RBP12.98□□□□□ -0.33
TWNK-202ENST00000370228 BSDC1Q9NW68 430 aaPredicted RBP12.98□□□□□ -0.33
TWNK-202ENST00000370228 COL18A1P39060 1754 aa12.98□□□□□ -0.33
TWNK-202ENST00000370228 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
TWNK-202ENST00000370228 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
TWNK-202ENST00000370228 SPG7Q9UQ90 795 aa12.98□□□□□ -0.33
TWNK-202ENST00000370228 JRKLQ9Y4A0 524 aa12.97□□□□□ -0.33
TWNK-202ENST00000370228 PHKG2P15735 406 aa12.97□□□□□ -0.33
TWNK-202ENST00000370228 TEFQ10587 303 aa12.97□□□□□ -0.33
TWNK-202ENST00000370228 KIF18AQ8NI77 898 aa12.97□□□□□ -0.33
TWNK-202ENST00000370228 RIOK3O14730 519 aaKnown RBP12.97□□□□□ -0.33
TWNK-202ENST00000370228 TRIM37O94972 964 aa12.97□□□□□ -0.33
TWNK-202ENST00000370228 NCBP1Q09161 790 aaKnown RBP12.97□□□□□ -0.33
TWNK-202ENST00000370228 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
TWNK-202ENST00000370228 PLCH1Q4KWH8 1693 aa12.96□□□□□ -0.33
TWNK-202ENST00000370228 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.33
TWNK-202ENST00000370228 RAB3GAP1Q15042 981 aa12.96□□□□□ -0.33
TWNK-202ENST00000370228 DRC1Q96MC2 740 aa12.96□□□□□ -0.33
TWNK-202ENST00000370228 ZNF330Q9Y3S2 320 aaPredicted RBP12.96□□□□□ -0.33
TWNK-202ENST00000370228 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
TWNK-202ENST00000370228 PRAMEF22A3QJZ6 481 aa12.96□□□□□ -0.33
TWNK-202ENST00000370228 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.33
TWNK-202ENST00000370228 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.33
TWNK-202ENST00000370228 NOL10Q9BSC4 688 aaKnown RBP12.96□□□□□ -0.33
TWNK-202ENST00000370228 ZNF446Q9NWS9 450 aa12.96□□□□□ -0.33
TWNK-202ENST00000370228 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
TWNK-202ENST00000370228 KDRP35968 1356 aa12.96□□□□□ -0.33
TWNK-202ENST00000370228 GSCP56915 257 aaPredicted RBP12.95□□□□□ -0.34
TWNK-202ENST00000370228 LRCH2Q5VUJ6 765 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 HSCBQ8IWL3 235 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 SPTLC3Q9NUV7 552 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 KIF24Q5T7B8 1368 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 PPP1R12AO14974 1030 aaPredicted RBP12.95□□□□□ -0.34
TWNK-202ENST00000370228 REC8O95072 547 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 GAS2L2Q8NHY3 880 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 DIAPH3Q9NSV4 1193 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 GOLGA6L6A8MZA4 724 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 SYCP1Q15431 976 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
TWNK-202ENST00000370228 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
TWNK-202ENST00000370228 COL14A1Q05707 1796 aaKnown RBP12.94□□□□□ -0.34
TWNK-202ENST00000370228 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
TWNK-202ENST00000370228 CABP4P57796 275 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 C10orf67Q8IYJ2 551 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
TWNK-202ENST00000370228 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
TWNK-202ENST00000370228 MYO1CO00159 1063 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 TRIM66O15016 1216 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 MAFGO15525 162 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
TWNK-202ENST00000370228 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 MUM1L1Q5H9M0 696 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 ZNF526Q8TF50 670 aaPredicted RBP12.94□□□□□ -0.34
TWNK-202ENST00000370228 C22orf23Q9BZE7 217 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 FAM53CQ9NYF3 392 aa12.94□□□□□ -0.34
TWNK-202ENST00000370228 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 ZNF513Q8N8E2 541 aaPredicted RBP12.93□□□□□ -0.34
TWNK-202ENST00000370228 ATP2B1P20020 1258 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 ANXA1P04083 346 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 RLBP1P12271 317 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 EIF2S2P20042 333 aaKnown RBP12.93□□□□□ -0.34
TWNK-202ENST00000370228 BIRC2Q13490 618 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 PCDH11XQ9BZA7 1347 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 PCDH11YQ9BZA8 1340 aa12.93□□□□□ -0.34
TWNK-202ENST00000370228 RNMTO43148 476 aaKnown RBP12.92□□□□□ -0.34
TWNK-202ENST00000370228 AKAP4Q5JQC9 854 aa12.92□□□□□ -0.34
TWNK-202ENST00000370228 ZKSCAN2Q63HK3 967 aa12.92□□□□□ -0.34
TWNK-202ENST00000370228 SYT10Q6XYQ8 523 aa12.92□□□□□ -0.34
TWNK-202ENST00000370228 TSPYL6Q8N831 410 aa12.92□□□□□ -0.34
TWNK-202ENST00000370228 ITFG2Q969R8 447 aa12.92□□□□□ -0.34
TWNK-202ENST00000370228 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
TWNK-202ENST00000370228 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
TWNK-202ENST00000370228 PIGBQ92521 554 aa12.91□□□□□ -0.34
TWNK-202ENST00000370228 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
TWNK-202ENST00000370228 C11orf91Q3C1V1 193 aa12.91□□□□□ -0.34
TWNK-202ENST00000370228 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms