RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 HSP90B1P14625 803 aaKnown RBP11.09□□□□□ -0.63
SFR1-202ENST00000369729 SSFA2P28290 1259 aa11.09□□□□□ -0.63
SFR1-202ENST00000369729 RFC4P35249 363 aa11.09□□□□□ -0.63
SFR1-202ENST00000369729 TCIRG1Q13488 830 aa11.09□□□□□ -0.63
SFR1-202ENST00000369729 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
SFR1-202ENST00000369729 CLEC4GQ6UXB4 293 aa11.09□□□□□ -0.63
SFR1-202ENST00000369729 GIGYF2Q6Y7W6 1299 aaKnown RBP11.09□□□□□ -0.63
SFR1-202ENST00000369729 CCDC191Q8NCU4 936 aa11.09□□□□□ -0.63
SFR1-202ENST00000369729 RGPD3A6NKT7 1758 aaPredicted RBP11.08□□□□□ -0.64
SFR1-202ENST00000369729 RGPD4Q7Z3J3 1758 aa11.08□□□□□ -0.64
SFR1-202ENST00000369729 COL5A3P25940 1745 aaPredicted RBP11.08□□□□□ -0.64
SFR1-202ENST00000369729 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.64
SFR1-202ENST00000369729 GNAI2P04899 355 aa11.08□□□□□ -0.64
SFR1-202ENST00000369729 KCNQ4P56696 695 aa11.08□□□□□ -0.64
SFR1-202ENST00000369729 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
SFR1-202ENST00000369729 LRRC4BQ9NT99 713 aa11.08□□□□□ -0.64
SFR1-202ENST00000369729 CWC25Q9NXE8 425 aaPredicted RBP11.08□□□□□ -0.64
SFR1-202ENST00000369729 TFCP2L1Q9NZI6 479 aa11.08□□□□□ -0.64
SFR1-202ENST00000369729 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
SFR1-202ENST00000369729 PARP10Q53GL7 1025 aa11.07□□□□□ -0.64
SFR1-202ENST00000369729 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
SFR1-202ENST00000369729 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
SFR1-202ENST00000369729 STK32BQ9NY57 414 aa11.07□□□□□ -0.64
SFR1-202ENST00000369729 NARFQ9UHQ1 456 aa11.07□□□□□ -0.64
SFR1-202ENST00000369729 RREB1Q92766 1687 aa11.07□□□□□ -0.64
SFR1-202ENST00000369729 C4BP0C0L5 1744 aa11.06□□□□□ -0.64
SFR1-202ENST00000369729 NEURL1BA8MQ27 555 aa11.06□□□□□ -0.64
SFR1-202ENST00000369729 GRM8O00222 908 aa11.06□□□□□ -0.64
SFR1-202ENST00000369729 HMMRO75330 724 aa11.06□□□□□ -0.64
SFR1-202ENST00000369729 EN1Q05925 392 aaPredicted RBP11.06□□□□□ -0.64
SFR1-202ENST00000369729 GCKRQ14397 625 aa11.06□□□□□ -0.64
SFR1-202ENST00000369729 RPAP2Q8IXW5 612 aaPredicted RBP11.06□□□□□ -0.64
SFR1-202ENST00000369729 CAMKK2Q96RR4 588 aa11.06□□□□□ -0.64
SFR1-202ENST00000369729 TNS1Q9HBL0 1735 aaKnown RBP11.06□□□□□ -0.64
SFR1-202ENST00000369729 PHF14O94880 888 aa11.05□□□□□ -0.64
SFR1-202ENST00000369729 CAMTA2O94983 1202 aa11.05□□□□□ -0.64
SFR1-202ENST00000369729 PPP1R42Q7Z4L9 355 aa11.05□□□□□ -0.64
SFR1-202ENST00000369729 PROM2Q8N271 834 aa11.05□□□□□ -0.64
SFR1-202ENST00000369729 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
SFR1-202ENST00000369729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
SFR1-202ENST00000369729 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 IGKV5-2P06315 115 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 EZH2Q15910 746 aaKnown RBP11.04□□□□□ -0.64
SFR1-202ENST00000369729 CWF19L2Q2TBE0 894 aaKnown RBP11.04□□□□□ -0.64
SFR1-202ENST00000369729 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
SFR1-202ENST00000369729 MEIS3Q99687 375 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 ISCA1Q9BUE6 129 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 USP44Q9H0E7 712 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 TAF1LQ8IZX4 1826 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 SETDB2Q96T68 719 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 NYXQ9GZU5 481 aa11.04□□□□□ -0.64
SFR1-202ENST00000369729 UTYO14607 1347 aa11.03□□□□□ -0.64
SFR1-202ENST00000369729 USP42Q9H9J4 1324 aaKnown RBP11.03□□□□□ -0.64
SFR1-202ENST00000369729 PCCAP05165 728 aaPredicted RBP11.03□□□□□ -0.64
SFR1-202ENST00000369729 HLFQ16534 295 aa11.03□□□□□ -0.64
SFR1-202ENST00000369729 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
SFR1-202ENST00000369729 ZNF34Q8IZ26 560 aa11.03□□□□□ -0.64
SFR1-202ENST00000369729 ZBTB38Q8NAP3 1195 aaPredicted RBP11.03□□□□□ -0.64
SFR1-202ENST00000369729 UTP14AQ9BVJ6 771 aaKnown RBP11.03□□□□□ -0.64
SFR1-202ENST00000369729 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
SFR1-202ENST00000369729 TRMT112Q9UI30 125 aaKnown RBP11.03□□□□□ -0.64
SFR1-202ENST00000369729 NIP7Q9Y221 180 aaKnown RBP eCLIP11.03□□□□□ -0.64
SFR1-202ENST00000369729 N4BP2Q86UW6 1770 aaPredicted RBP11.03□□□□□ -0.64
SFR1-202ENST00000369729 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
SFR1-202ENST00000369729 MYH14Q7Z406 1995 aaKnown RBP11.02□□□□□ -0.65
SFR1-202ENST00000369729 NPHP1O15259 732 aa11.02□□□□□ -0.65
SFR1-202ENST00000369729 GPTP24298 496 aa11.02□□□□□ -0.65
SFR1-202ENST00000369729 GTF2E1P29083 439 aaPredicted RBP11.02□□□□□ -0.65
SFR1-202ENST00000369729 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.65
SFR1-202ENST00000369729 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
SFR1-202ENST00000369729 CENPQQ7L2Z9 268 aaPredicted RBP11.02□□□□□ -0.65
SFR1-202ENST00000369729 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
SFR1-202ENST00000369729 NLRP10Q86W26 655 aa11.02□□□□□ -0.65
SFR1-202ENST00000369729 TSPYL2Q9H2G4 693 aaPredicted RBP11.02□□□□□ -0.65
SFR1-202ENST00000369729 H7C1W4 665 aa11.01□□□□□ -0.65
SFR1-202ENST00000369729 NBPF7P0C2Y1 421 aaPredicted RBP11.01□□□□□ -0.65
SFR1-202ENST00000369729 C7P10643 843 aa11.01□□□□□ -0.65
SFR1-202ENST00000369729 NLGN1Q8N2Q7 840 aa11.01□□□□□ -0.65
SFR1-202ENST00000369729 ANKRD44Q8N8A2 993 aa11.01□□□□□ -0.65
SFR1-202ENST00000369729 SLC39A7Q92504 469 aa11.01□□□□□ -0.65
SFR1-202ENST00000369729 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
SFR1-202ENST00000369729 LRRFIP2Q9Y608 721 aaKnown RBP11.01□□□□□ -0.65
SFR1-202ENST00000369729 NUP188Q5SRE5 1749 aa11.01□□□□□ -0.65
SFR1-202ENST00000369729 SH3TC1Q8TE82 1336 aa11.01□□□□□ -0.65
SFR1-202ENST00000369729 B4GALNT3Q6L9W6 998 aa11□□□□□ -0.65
SFR1-202ENST00000369729 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
SFR1-202ENST00000369729 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
SFR1-202ENST00000369729 CDHR2Q9BYE9 1310 aa11□□□□□ -0.65
SFR1-202ENST00000369729 ATP8B2P98198 1209 aa10.99□□□□□ -0.65
SFR1-202ENST00000369729 ZNF827Q17R98 1081 aa10.99□□□□□ -0.65
SFR1-202ENST00000369729 HSP90AB4PQ58FF6 505 aa10.99□□□□□ -0.65
SFR1-202ENST00000369729 CEP85Q6P2H3 762 aa10.99□□□□□ -0.65
SFR1-202ENST00000369729 NBPF5PQ86XG9 351 aaPredicted RBP10.99□□□□□ -0.65
SFR1-202ENST00000369729 UPF1Q92900 1129 aaKnown RBP eCLIP10.99□□□□□ -0.65
SFR1-202ENST00000369729 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
SFR1-202ENST00000369729 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
SFR1-202ENST00000369729 SRP68Q9UHB9 627 aaKnown RBP10.99□□□□□ -0.65
SFR1-202ENST00000369729 PCDHB15Q9Y5E8 787 aa10.99□□□□□ -0.65
SFR1-202ENST00000369729 CARMIL3Q8ND23 1372 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms