RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 DNM1Q05193 864 aaKnown RBP18.96■□□□□ 0.63
SYNCRIP-202ENST00000369622 POLA2Q14181 598 aa18.96■□□□□ 0.63
SYNCRIP-202ENST00000369622 FERMT3Q86UX7 667 aa18.96■□□□□ 0.63
SYNCRIP-202ENST00000369622 PDRG1Q9NUG6 133 aa18.96■□□□□ 0.63
SYNCRIP-202ENST00000369622 MAP3K2Q9Y2U5 619 aa18.96■□□□□ 0.63
SYNCRIP-202ENST00000369622 AACSQ86V21 672 aa18.96■□□□□ 0.63
SYNCRIP-202ENST00000369622 GLRX3O76003 335 aaKnown RBP18.95■□□□□ 0.62
SYNCRIP-202ENST00000369622 CCDC8Q9H0W5 538 aaPredicted RBP18.95■□□□□ 0.62
SYNCRIP-202ENST00000369622 PRAMEF22A3QJZ6 481 aa18.95■□□□□ 0.62
SYNCRIP-202ENST00000369622 HSP90AB4PQ58FF6 505 aa18.95■□□□□ 0.62
SYNCRIP-202ENST00000369622 CCDC183Q5T5S1 534 aa18.95■□□□□ 0.62
SYNCRIP-202ENST00000369622 KCNF1Q9H3M0 494 aa18.95■□□□□ 0.62
SYNCRIP-202ENST00000369622 DDX41Q9UJV9 622 aaKnown RBP18.95■□□□□ 0.62
SYNCRIP-202ENST00000369622 RUFY2Q8WXA3 655 aa18.94■□□□□ 0.62
SYNCRIP-202ENST00000369622 SPTLC3Q9NUV7 552 aa18.94■□□□□ 0.62
SYNCRIP-202ENST00000369622 TBX22Q9Y458 520 aa18.94■□□□□ 0.62
SYNCRIP-202ENST00000369622 AOX1Q06278 1338 aa18.94■□□□□ 0.62
SYNCRIP-202ENST00000369622 F13A1P00488 732 aa18.94■□□□□ 0.62
SYNCRIP-202ENST00000369622 PSME1Q06323 249 aa18.94■□□□□ 0.62
SYNCRIP-202ENST00000369622 PROSER3Q2NL68 480 aa18.94■□□□□ 0.62
SYNCRIP-202ENST00000369622 RPAP1Q9BWH6 1393 aaPredicted RBP18.94■□□□□ 0.62
SYNCRIP-202ENST00000369622 TTC14Q96N46 770 aa18.93■□□□□ 0.62
SYNCRIP-202ENST00000369622 FAM173BQ6P4H8 233 aa18.93■□□□□ 0.62
SYNCRIP-202ENST00000369622 CYP46A1Q9Y6A2 500 aa18.93■□□□□ 0.62
SYNCRIP-202ENST00000369622 ESCO1Q5FWF5 840 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 ECHDC1Q9NTX5 307 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 HNRNPH2P55795 449 aaKnown RBP18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 KIAA1524Q8TCG1 905 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 FAM227BQ96M60 508 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 ZKSCAN1P17029 563 aaPredicted RBP18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 UBE2HP62256 183 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 GPATCH3Q96I76 525 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 BOLA2Q9H3K6 86 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 CALCOCO1Q9P1Z2 691 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 ATP6V1DQ9Y5K8 247 aa18.92■□□□□ 0.62
SYNCRIP-202ENST00000369622 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 STK3Q13188 491 aa18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 C1orf141Q5JVX7 400 aa18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 KIF18AQ8NI77 898 aa18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 KLHDC4Q8TBB5 520 aa18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 FEZ2Q9UHY8 353 aaPredicted RBP18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 CCDC9Q9Y3X0 531 aaKnown RBP18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 RGPD1P0DJD0 1748 aa18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 TCHHQ07283 1943 aa18.91■□□□□ 0.62
SYNCRIP-202ENST00000369622 CTIFO43310 598 aaKnown RBP18.9■□□□□ 0.62
SYNCRIP-202ENST00000369622 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
SYNCRIP-202ENST00000369622 CAMK4Q16566 473 aa18.9■□□□□ 0.62
SYNCRIP-202ENST00000369622 KRT222Q8N1A0 295 aa18.9■□□□□ 0.62
SYNCRIP-202ENST00000369622 DBF4Q9UBU7 674 aaPredicted RBP18.9■□□□□ 0.62
SYNCRIP-202ENST00000369622 LOC102724159A0A0B4J2E5 919 aa18.9■□□□□ 0.62
SYNCRIP-202ENST00000369622 G3BP1Q13283 466 aaKnown RBP eCLIP18.9■□□□□ 0.623e-7■□□□□ 9.3
SYNCRIP-202ENST00000369622 PWP2Q15269 919 aaKnown RBP18.9■□□□□ 0.62
SYNCRIP-202ENST00000369622 AP5Z1O43299 807 aa18.89■□□□□ 0.61
SYNCRIP-202ENST00000369622 LARP1BQ659C4 914 aaKnown RBP18.89■□□□□ 0.61
SYNCRIP-202ENST00000369622 RSPH14Q9UHP6 348 aa18.89■□□□□ 0.61
SYNCRIP-202ENST00000369622 MYCNP04198 464 aaPredicted RBP18.89■□□□□ 0.61
SYNCRIP-202ENST00000369622 COL9A3Q14050 684 aaPredicted RBP18.89■□□□□ 0.61
SYNCRIP-202ENST00000369622 ME3Q16798 604 aa18.89■□□□□ 0.61
SYNCRIP-202ENST00000369622 RBM8AQ9Y5S9 174 aaKnown RBP18.89■□□□□ 0.61
SYNCRIP-202ENST00000369622 LRMPQ12912 555 aa18.88■□□□□ 0.61
SYNCRIP-202ENST00000369622 IP6K1Q92551 441 aa18.88■□□□□ 0.61
SYNCRIP-202ENST00000369622 BABAM1Q9NWV8 329 aa18.88■□□□□ 0.61
SYNCRIP-202ENST00000369622 PRR29P0C7W0 189 aa18.88■□□□□ 0.61
SYNCRIP-202ENST00000369622 PTGS1P23219 599 aa18.88■□□□□ 0.61
SYNCRIP-202ENST00000369622 FAM184AQ8NB25 1140 aa18.88■□□□□ 0.61
SYNCRIP-202ENST00000369622 FSD1Q9BTV5 496 aa18.88■□□□□ 0.61
SYNCRIP-202ENST00000369622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.88■□□□□ 0.61
SYNCRIP-202ENST00000369622 TULP2O00295 520 aa18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 MYL6BP14649 208 aa18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 GYS2P54840 703 aa18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 PLEKHO1Q53GL0 409 aaPredicted RBP18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 EP400NLQ6ZTU2 488 aa18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 GTF3C6Q969F1 213 aa18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 TFIP11Q9UBB9 837 aaKnown RBP18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 MTMR6Q9Y217 621 aa18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 TTC41PQ6P2S7 1318 aa18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 NMIQ13287 307 aaPredicted RBP18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 TOMM22Q9NS69 142 aa18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 TLR7Q9NYK1 1049 aaKnown RBP18.87■□□□□ 0.61
SYNCRIP-202ENST00000369622 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
SYNCRIP-202ENST00000369622 ADCY9O60503 1353 aa18.86■□□□□ 0.61
SYNCRIP-202ENST00000369622 MORC2Q9Y6X9 1032 aaPredicted RBP18.86■□□□□ 0.61
SYNCRIP-202ENST00000369622 GOLGA6L4A6NEF3 574 aa18.86■□□□□ 0.61
SYNCRIP-202ENST00000369622 EAF2Q96CJ1 260 aaPredicted RBP18.86■□□□□ 0.61
SYNCRIP-202ENST00000369622 EDC3Q96F86 508 aaKnown RBP18.86■□□□□ 0.61
SYNCRIP-202ENST00000369622 TPCN1Q9ULQ1 816 aa18.86■□□□□ 0.61
SYNCRIP-202ENST00000369622 SLC20A2Q08357 652 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 RAD51AP2Q09MP3 1159 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 KMT5BQ4FZB7 885 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 VPS53Q5VIR6 699 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 CREB3L3Q68CJ9 461 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 EVI5LQ96CN4 794 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 BICC1Q9H694 974 aaKnown RBP18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 NDUFB9Q9Y6M9 179 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 UBR1Q8IWV7 1749 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 APPP05067 770 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 TNNT1P13805 278 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 PIP4K2AP48426 406 aaPredicted RBP18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 RIC3Q7Z5B4 369 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms