RNA–Protein interactions for RNA: ENST00000369479.1

CMC4-201, Transcript of C-X9-C motif containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMC4, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4-201ENST00000369479 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 H7C1W4 665 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 RFX5P48382 616 aaPredicted RBP16.72■□□□□ 0.27
CMC4-201ENST00000369479 ANP32BQ92688 251 aaKnown RBP16.72■□□□□ 0.27
CMC4-201ENST00000369479 MAP4K1Q92918 833 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
CMC4-201ENST00000369479 UPF3BQ9BZI7 483 aaKnown RBP16.72■□□□□ 0.27
CMC4-201ENST00000369479 IL25Q9H293 177 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 GPR108Q9NPR9 543 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 HMG20BQ9P0W2 317 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
CMC4-201ENST00000369479 COL5A2P05997 1499 aaPredicted RBP16.72■□□□□ 0.27
CMC4-201ENST00000369479 A0A087WZG4 1122 aa16.71■□□□□ 0.27
CMC4-201ENST00000369479 NCLP19338 710 aaKnown RBP16.71■□□□□ 0.27
CMC4-201ENST00000369479 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
CMC4-201ENST00000369479 ANKRD1Q15327 319 aa16.71■□□□□ 0.27
CMC4-201ENST00000369479 SYAP1Q96A49 352 aaPredicted RBP16.71■□□□□ 0.27
CMC4-201ENST00000369479 ATG3Q9NT62 314 aa16.71■□□□□ 0.27
CMC4-201ENST00000369479 GLI3P10071 1580 aa16.7■□□□□ 0.26
CMC4-201ENST00000369479 PRPF40AO75400 957 aaKnown RBP16.7■□□□□ 0.26
CMC4-201ENST00000369479 CASP7P55210 303 aa16.7■□□□□ 0.26
CMC4-201ENST00000369479 PKP1Q13835 747 aa16.7■□□□□ 0.26
CMC4-201ENST00000369479 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
CMC4-201ENST00000369479 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
CMC4-201ENST00000369479 FSD1Q9BTV5 496 aa16.7■□□□□ 0.26
CMC4-201ENST00000369479 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
CMC4-201ENST00000369479 PDRG1Q9NUG6 133 aa16.7■□□□□ 0.26
CMC4-201ENST00000369479 CWC25Q9NXE8 425 aaPredicted RBP16.7■□□□□ 0.26
CMC4-201ENST00000369479 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
CMC4-201ENST00000369479 AK2P54819 239 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 PTPN12Q05209 780 aaKnown RBP16.69■□□□□ 0.26
CMC4-201ENST00000369479 KRT32Q14532 448 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 CSPP1Q1MSJ5 1256 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 TNNI3KQ59H18 835 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 EPHA10Q5JZY3 1008 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 UBE3BQ7Z3V4 1068 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 FPGT-TNNI3KV9GXZ4 949 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 TNS2Q63HR2 1409 aa16.69■□□□□ 0.26
CMC4-201ENST00000369479 KCNJ4P48050 445 aa16.68■□□□□ 0.26
CMC4-201ENST00000369479 CCDC173Q0VFZ6 552 aa16.68■□□□□ 0.26
CMC4-201ENST00000369479 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
CMC4-201ENST00000369479 RUFY3Q7L099 469 aa16.68■□□□□ 0.26
CMC4-201ENST00000369479 VSIG10Q8N0Z9 540 aa16.68■□□□□ 0.26
CMC4-201ENST00000369479 TMEM87AQ8NBN3 555 aa16.68■□□□□ 0.26
CMC4-201ENST00000369479 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
CMC4-201ENST00000369479 RBM8AQ9Y5S9 174 aaKnown RBP16.68■□□□□ 0.26
CMC4-201ENST00000369479 JCADQ9P266 1359 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 PHF14O94880 888 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 CASTP20810 708 aaKnown RBP16.67■□□□□ 0.26
CMC4-201ENST00000369479 HSPA2P54652 639 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 EVA1CP58658 441 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 PTH1RQ03431 593 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 ZSCAN23Q3MJ62 389 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 CREB3L3Q68CJ9 461 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
CMC4-201ENST00000369479 GAS2L3Q86XJ1 694 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 JAKMIP1Q96N16 626 aaKnown RBP16.67■□□□□ 0.26
CMC4-201ENST00000369479 SIL1Q9H173 461 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
CMC4-201ENST00000369479 STRCQ7RTU9 1775 aa16.66■□□□□ 0.26
CMC4-201ENST00000369479 KCPQ6ZWJ8 1503 aa16.66■□□□□ 0.26
CMC4-201ENST00000369479 NBPF26B4DH59 902 aa16.66■□□□□ 0.26
CMC4-201ENST00000369479 CIAO1O76071 339 aa16.66■□□□□ 0.26
CMC4-201ENST00000369479 IL15P40933 162 aaPredicted RBP16.66■□□□□ 0.26
CMC4-201ENST00000369479 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
CMC4-201ENST00000369479 NBPF14Q5TI25 921 aa16.66■□□□□ 0.26
CMC4-201ENST00000369479 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
CMC4-201ENST00000369479 NBPF10Q6P3W6 841 aaKnown RBP16.66■□□□□ 0.26
CMC4-201ENST00000369479 NBPF15Q8N660 670 aa16.66■□□□□ 0.26
CMC4-201ENST00000369479 ABCA3Q99758 1704 aa16.66■□□□□ 0.26
CMC4-201ENST00000369479 HAUS7Q99871 368 aa16.66■□□□□ 0.26
CMC4-201ENST00000369479 RPAP1Q9BWH6 1393 aaPredicted RBP16.65■□□□□ 0.26
CMC4-201ENST00000369479 NUP188Q5SRE5 1749 aa16.65■□□□□ 0.26
CMC4-201ENST00000369479 FOXO4P98177 505 aa16.65■□□□□ 0.26
CMC4-201ENST00000369479 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
CMC4-201ENST00000369479 NHSL1Q5SYE7 1610 aa16.64■□□□□ 0.25
CMC4-201ENST00000369479 SLC27A2O14975 620 aa16.64■□□□□ 0.25
CMC4-201ENST00000369479 LETM1O95202 739 aaPredicted RBP16.64■□□□□ 0.25
CMC4-201ENST00000369479 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
CMC4-201ENST00000369479 PDCP20941 246 aa16.64■□□□□ 0.25
CMC4-201ENST00000369479 NASPP49321 788 aaPredicted RBP16.64■□□□□ 0.25
CMC4-201ENST00000369479 TFCP2Q12800 502 aa16.64■□□□□ 0.25
CMC4-201ENST00000369479 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
CMC4-201ENST00000369479 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
CMC4-201ENST00000369479 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
CMC4-201ENST00000369479 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
CMC4-201ENST00000369479 TRIM44Q96DX7 344 aaPredicted RBP16.64■□□□□ 0.25
CMC4-201ENST00000369479 PPP1R9BQ96SB3 815 aa16.64■□□□□ 0.25
CMC4-201ENST00000369479 DBNLQ9UJU6 430 aaKnown RBP16.64■□□□□ 0.25
CMC4-201ENST00000369479 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
CMC4-201ENST00000369479 STX6O43752 255 aa16.63■□□□□ 0.25
CMC4-201ENST00000369479 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
CMC4-201ENST00000369479 LRRFIP1Q32MZ4 808 aaKnown RBP16.63■□□□□ 0.25
CMC4-201ENST00000369479 BLOC1S2Q6QNY1 142 aa16.63■□□□□ 0.25
CMC4-201ENST00000369479 LRSAM1Q6UWE0 723 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms