RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 STK32BQ9NY57 414 aa13.75□□□□□ -0.21
BRCC3-204ENST00000369462 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
BRCC3-204ENST00000369462 GNAI2P04899 355 aa13.74□□□□□ -0.21
BRCC3-204ENST00000369462 ILDR2Q71H61 639 aa13.74□□□□□ -0.21
BRCC3-204ENST00000369462 UBE3BQ7Z3V4 1068 aa13.74□□□□□ -0.21
BRCC3-204ENST00000369462 NUP98P52948 1817 aa13.74□□□□□ -0.21
BRCC3-204ENST00000369462 BICDL1Q6ZP65 573 aa13.74□□□□□ -0.21
BRCC3-204ENST00000369462 LRRFIP2Q9Y608 721 aaKnown RBP13.74□□□□□ -0.21
BRCC3-204ENST00000369462 UBN2Q6ZU65 1347 aa13.74□□□□□ -0.21
BRCC3-204ENST00000369462 N4BP2Q86UW6 1770 aaPredicted RBP13.74□□□□□ -0.21
BRCC3-204ENST00000369462 COL23A1Q86Y22 540 aaPredicted RBP13.73□□□□□ -0.21
BRCC3-204ENST00000369462 FAM177BA6PVY3 158 aa13.73□□□□□ -0.21
BRCC3-204ENST00000369462 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
BRCC3-204ENST00000369462 RGL2O15211 777 aa13.72□□□□□ -0.21
BRCC3-204ENST00000369462 TBC1D9BQ66K14 1250 aa13.72□□□□□ -0.21
BRCC3-204ENST00000369462 UTYO14607 1347 aa13.72□□□□□ -0.21
BRCC3-204ENST00000369462 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
BRCC3-204ENST00000369462 H7C1W4 665 aa13.72□□□□□ -0.21
BRCC3-204ENST00000369462 FAM89AQ96GI7 184 aa13.72□□□□□ -0.21
BRCC3-204ENST00000369462 TRMT112Q9UI30 125 aaKnown RBP13.72□□□□□ -0.21
BRCC3-204ENST00000369462 IBTKQ9P2D0 1353 aaPredicted RBP13.72□□□□□ -0.21
BRCC3-204ENST00000369462 AFDNP55196 1824 aaKnown RBP13.72□□□□□ -0.21
BRCC3-204ENST00000369462 GYS1P13807 737 aa13.72□□□□□ -0.21
BRCC3-204ENST00000369462 SUSD4Q5VX71 490 aa13.72□□□□□ -0.21
BRCC3-204ENST00000369462 C4AP0C0L4 1744 aa13.71□□□□□ -0.21
BRCC3-204ENST00000369462 PARP10Q53GL7 1025 aa13.71□□□□□ -0.21
BRCC3-204ENST00000369462 SETDB2Q96T68 719 aa13.71□□□□□ -0.21
BRCC3-204ENST00000369462 SYNE4Q8N205 404 aa13.71□□□□□ -0.22
BRCC3-204ENST00000369462 ZBTB38Q8NAP3 1195 aaPredicted RBP13.71□□□□□ -0.22
BRCC3-204ENST00000369462 SUCLG2Q96I99 432 aa13.71□□□□□ -0.22
BRCC3-204ENST00000369462 HDAC5Q9UQL6 1122 aa13.71□□□□□ -0.22
BRCC3-204ENST00000369462 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
BRCC3-204ENST00000369462 PCCAP05165 728 aaPredicted RBP13.7□□□□□ -0.22
BRCC3-204ENST00000369462 CASP7P55210 303 aa13.7□□□□□ -0.22
BRCC3-204ENST00000369462 CEP85Q6P2H3 762 aa13.7□□□□□ -0.22
BRCC3-204ENST00000369462 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
BRCC3-204ENST00000369462 PPP1R42Q7Z4L9 355 aa13.7□□□□□ -0.22
BRCC3-204ENST00000369462 SIRT2Q8IXJ6 389 aa13.7□□□□□ -0.22
BRCC3-204ENST00000369462 UTP14AQ9BVJ6 771 aaKnown RBP13.7□□□□□ -0.22
BRCC3-204ENST00000369462 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
BRCC3-204ENST00000369462 IGHDP01880 384 aa13.69□□□□□ -0.22
BRCC3-204ENST00000369462 NFIXQ14938 502 aa13.69□□□□□ -0.22
BRCC3-204ENST00000369462 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
BRCC3-204ENST00000369462 BICC1Q9H694 974 aaKnown RBP13.69□□□□□ -0.22
BRCC3-204ENST00000369462 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
BRCC3-204ENST00000369462 ANKRD36CQ5JPF3 1778 aa13.69□□□□□ -0.22
BRCC3-204ENST00000369462 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
BRCC3-204ENST00000369462 EPHA10Q5JZY3 1008 aa13.68□□□□□ -0.22
BRCC3-204ENST00000369462 RWDD1Q9H446 243 aaPredicted RBP13.68□□□□□ -0.22
BRCC3-204ENST00000369462 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
BRCC3-204ENST00000369462 SH3TC1Q8TE82 1336 aa13.68□□□□□ -0.22
BRCC3-204ENST00000369462 NTSR2O95665 410 aa13.68□□□□□ -0.22
BRCC3-204ENST00000369462 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
BRCC3-204ENST00000369462 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
BRCC3-204ENST00000369462 NBPF5PQ86XG9 351 aaPredicted RBP13.68□□□□□ -0.22
BRCC3-204ENST00000369462 IRS4O14654 1257 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-204ENST00000369462 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-204ENST00000369462 ATP8B2P98198 1209 aa13.67□□□□□ -0.22
BRCC3-204ENST00000369462 NLGN1Q8N2Q7 840 aa13.67□□□□□ -0.22
BRCC3-204ENST00000369462 PDGFDQ9GZP0 370 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-204ENST00000369462 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
BRCC3-204ENST00000369462 HDAC1Q13547 482 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-204ENST00000369462 DAXXQ9UER7 740 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-204ENST00000369462 HCLS1P14317 486 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-204ENST00000369462 TM4SF1P30408 202 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 MSL1Q68DK7 614 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 CDHR2Q9BYE9 1310 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 NPHP1O15259 732 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 FOXO4P98177 505 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 LMBR1LQ6UX01 489 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 TPTE2Q6XPS3 522 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 CARMIL3Q8ND23 1372 aa13.66□□□□□ -0.22
BRCC3-204ENST00000369462 HMMRO75330 724 aa13.65□□□□□ -0.22
BRCC3-204ENST00000369462 ERFEQ4G0M1 354 aa13.65□□□□□ -0.22
BRCC3-204ENST00000369462 MTX1Q13505 466 aa13.65□□□□□ -0.22
BRCC3-204ENST00000369462 CHMP3Q9Y3E7 222 aa13.65□□□□□ -0.22
BRCC3-204ENST00000369462 RABL6Q3YEC7 729 aaPredicted RBP13.64□□□□□ -0.23
BRCC3-204ENST00000369462 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
BRCC3-204ENST00000369462 KDM2BQ8NHM5 1336 aa13.64□□□□□ -0.23
BRCC3-204ENST00000369462 PDE8AO60658 829 aa13.64□□□□□ -0.23
BRCC3-204ENST00000369462 DDR1Q08345 913 aa13.64□□□□□ -0.23
BRCC3-204ENST00000369462 CENPQQ7L2Z9 268 aaPredicted RBP13.64□□□□□ -0.23
BRCC3-204ENST00000369462 SSH3Q8TE77 659 aa13.64□□□□□ -0.23
BRCC3-204ENST00000369462 CCDC85AQ96PX6 553 aaPredicted RBP13.64□□□□□ -0.23
BRCC3-204ENST00000369462 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
BRCC3-204ENST00000369462 SERPINB2P05120 415 aa13.63□□□□□ -0.23
BRCC3-204ENST00000369462 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
BRCC3-204ENST00000369462 MMP10P09238 476 aa13.63□□□□□ -0.23
BRCC3-204ENST00000369462 R3HDM1Q15032 1099 aaKnown RBP13.63□□□□□ -0.23
BRCC3-204ENST00000369462 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
BRCC3-204ENST00000369462 HSP90B1P14625 803 aaKnown RBP13.63□□□□□ -0.23
BRCC3-204ENST00000369462 CTSWP56202 376 aa13.63□□□□□ -0.23
BRCC3-204ENST00000369462 POLA2Q14181 598 aa13.63□□□□□ -0.23
BRCC3-204ENST00000369462 TTLL11Q8NHH1 800 aa13.62□□□□□ -0.23
BRCC3-204ENST00000369462 CSF1RP07333 972 aa13.62□□□□□ -0.23
BRCC3-204ENST00000369462 PRR5LQ6MZQ0 368 aa13.62□□□□□ -0.23
BRCC3-204ENST00000369462 ABCC12Q96J65 1359 aa13.61□□□□□ -0.23
BRCC3-204ENST00000369462 KLHDC4Q8TBB5 520 aa13.61□□□□□ -0.23
BRCC3-204ENST00000369462 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms