RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ERVV-1B6SEH8 477 aa20.76■□□□□ 0.91
PHGDH-202ENST00000369409 GPTP24298 496 aa20.76■□□□□ 0.91
PHGDH-202ENST00000369409 RHPN1Q8TCX5 695 aa20.76■□□□□ 0.91
PHGDH-202ENST00000369409 KIF1BPQ96EK5 621 aa20.76■□□□□ 0.91
PHGDH-202ENST00000369409 KRT27Q7Z3Y8 459 aa20.75■□□□□ 0.91
PHGDH-202ENST00000369409 EP400Q96L91 3159 aa20.75■□□□□ 0.91
PHGDH-202ENST00000369409 SALL3Q9BXA9 1300 aa20.75■□□□□ 0.91
PHGDH-202ENST00000369409 CNTNAP4Q9C0A0 1308 aa20.75■□□□□ 0.91
PHGDH-202ENST00000369409 GSPT1P15170 499 aaKnown RBP20.75■□□□□ 0.91
PHGDH-202ENST00000369409 RBM6P78332 1123 aaKnown RBP20.75■□□□□ 0.91
PHGDH-202ENST00000369409 TTC22Q5TAA0 569 aa20.75■□□□□ 0.91
PHGDH-202ENST00000369409 CCNL1Q9UK58 526 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-202ENST00000369409 FOXO4P98177 505 aa20.74■□□□□ 0.91
PHGDH-202ENST00000369409 C4BP0C0L5 1744 aa20.74■□□□□ 0.91
PHGDH-202ENST00000369409 LMBR1LQ6UX01 489 aa20.73■□□□□ 0.91
PHGDH-202ENST00000369409 NLRP10Q86W26 655 aa20.73■□□□□ 0.91
PHGDH-202ENST00000369409 KLHDC4Q8TBB5 520 aa20.73■□□□□ 0.91
PHGDH-202ENST00000369409 SEC24BO95487 1268 aa20.73■□□□□ 0.91
PHGDH-202ENST00000369409 PDE1AP54750 535 aa20.73■□□□□ 0.91
PHGDH-202ENST00000369409 BCL11BQ9C0K0 894 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-202ENST00000369409 SIL1Q9H173 461 aa20.73■□□□□ 0.91
PHGDH-202ENST00000369409 CAMTA2O94983 1202 aa20.72■□□□□ 0.91
PHGDH-202ENST00000369409 PCCAP05165 728 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-202ENST00000369409 MX1P20591 662 aa20.72■□□□□ 0.91
PHGDH-202ENST00000369409 FAM196AQ6ZSG2 479 aa20.72■□□□□ 0.91
PHGDH-202ENST00000369409 ERC1Q8IUD2 1116 aa20.72■□□□□ 0.91
PHGDH-202ENST00000369409 CHMP3Q9Y3E7 222 aa20.72■□□□□ 0.91
PHGDH-202ENST00000369409 UBN2Q6ZU65 1347 aa20.72■□□□□ 0.91
PHGDH-202ENST00000369409 AK9Q5TCS8 1911 aa20.71■□□□□ 0.91
PHGDH-202ENST00000369409 RFX5P48382 616 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-202ENST00000369409 ZBTB38Q8NAP3 1195 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-202ENST00000369409 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
PHGDH-202ENST00000369409 C4AP0C0L4 1744 aa20.71■□□□□ 0.91
PHGDH-202ENST00000369409 G3BP1Q13283 466 aaKnown RBP eCLIP20.71■□□□□ 0.919e-7■■■□□ 18.4
PHGDH-202ENST00000369409 TSHZ3Q63HK5 1081 aa20.71■□□□□ 0.91
PHGDH-202ENST00000369409 OSBPL3Q9H4L5 887 aa20.71■□□□□ 0.91
PHGDH-202ENST00000369409 ANP32AP39687 249 aaKnown RBP20.7■□□□□ 0.9
PHGDH-202ENST00000369409 NUTM1Q86Y26 1132 aa20.7■□□□□ 0.9
PHGDH-202ENST00000369409 ZNF34Q8IZ26 560 aa20.7■□□□□ 0.9
PHGDH-202ENST00000369409 LAMB2P55268 1798 aa20.7■□□□□ 0.9
PHGDH-202ENST00000369409 PTPN12Q05209 780 aaKnown RBP20.69■□□□□ 0.9
PHGDH-202ENST00000369409 COPRSQ9NQ92 184 aa20.69■□□□□ 0.9
PHGDH-202ENST00000369409 CDHR2Q9BYE9 1310 aa20.68■□□□□ 0.9
PHGDH-202ENST00000369409 DDX60Q8IY21 1712 aaKnown RBP20.68■□□□□ 0.9
PHGDH-202ENST00000369409 SASH1O94885 1247 aa20.68■□□□□ 0.9
PHGDH-202ENST00000369409 RC3H1Q5TC82 1133 aaKnown RBP20.68■□□□□ 0.9
PHGDH-202ENST00000369409 SYNE4Q8N205 404 aa20.67■□□□□ 0.9
PHGDH-202ENST00000369409 STAP2Q9UGK3 403 aa20.67■□□□□ 0.9
PHGDH-202ENST00000369409 TRMT112Q9UI30 125 aaKnown RBP20.67■□□□□ 0.9
PHGDH-202ENST00000369409 GNPATO15228 680 aa20.67■□□□□ 0.9
PHGDH-202ENST00000369409 TRIM37O94972 964 aa20.67■□□□□ 0.9
PHGDH-202ENST00000369409 CLASRPQ8N2M8 674 aaKnown RBP20.67■□□□□ 0.9
PHGDH-202ENST00000369409 PLA2G12BQ9BX93 195 aa20.67■□□□□ 0.9
PHGDH-202ENST00000369409 SMIM5Q71RC9 77 aa20.66■□□□□ 0.9
PHGDH-202ENST00000369409 ZNF652Q9Y2D9 606 aa20.66■□□□□ 0.9
PHGDH-202ENST00000369409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-202ENST00000369409 AOX1Q06278 1338 aa20.66■□□□□ 0.9
PHGDH-202ENST00000369409 CASZ1Q86V15 1759 aa20.66■□□□□ 0.9
PHGDH-202ENST00000369409 UBR3Q6ZT12 1888 aa20.66■□□□□ 0.9
PHGDH-202ENST00000369409 CDC45O75419 566 aa20.65■□□□□ 0.9
PHGDH-202ENST00000369409 SDSP20132 328 aa20.65■□□□□ 0.9
PHGDH-202ENST00000369409 TBC1D9Q6ZT07 1266 aa20.65■□□□□ 0.9
PHGDH-202ENST00000369409 RPS6KA4O75676 772 aa20.64■□□□□ 0.9
PHGDH-202ENST00000369409 FBXO41Q8TF61 875 aa20.64■□□□□ 0.9
PHGDH-202ENST00000369409 IRS4O14654 1257 aaPredicted RBP20.64■□□□□ 0.89
PHGDH-202ENST00000369409 RXRBP28702 533 aa20.64■□□□□ 0.89
PHGDH-202ENST00000369409 MFAP1P55081 439 aaKnown RBP20.64■□□□□ 0.89
PHGDH-202ENST00000369409 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.89
PHGDH-202ENST00000369409 NIP7Q9Y221 180 aaKnown RBP eCLIP20.64■□□□□ 0.89
PHGDH-202ENST00000369409 COL24A1Q17RW2 1714 aa20.63■□□□□ 0.89
PHGDH-202ENST00000369409 FAM177BA6PVY3 158 aa20.63■□□□□ 0.89
PHGDH-202ENST00000369409 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
PHGDH-202ENST00000369409 AACSQ86V21 672 aa20.63■□□□□ 0.89
PHGDH-202ENST00000369409 CCDC85AQ96PX6 553 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-202ENST00000369409 LRRC4BQ9NT99 713 aa20.63■□□□□ 0.89
PHGDH-202ENST00000369409 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
PHGDH-202ENST00000369409 RTCBQ9Y3I0 505 aaKnown RBP20.62■□□□□ 0.89
PHGDH-202ENST00000369409 USP42Q9H9J4 1324 aaKnown RBP20.62■□□□□ 0.89
PHGDH-202ENST00000369409 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
PHGDH-202ENST00000369409 CTSWP56202 376 aa20.62■□□□□ 0.89
PHGDH-202ENST00000369409 AMIGO3Q86WK7 504 aa20.62■□□□□ 0.89
PHGDH-202ENST00000369409 SH3TC1Q8TE82 1336 aa20.61■□□□□ 0.89
PHGDH-202ENST00000369409 CSF1RP07333 972 aa20.61■□□□□ 0.89
PHGDH-202ENST00000369409 CCDC57Q2TAC2 916 aa20.61■□□□□ 0.89
PHGDH-202ENST00000369409 CLEC4GQ6UXB4 293 aa20.61■□□□□ 0.89
PHGDH-202ENST00000369409 PI4K2BQ8TCG2 481 aa20.61■□□□□ 0.89
PHGDH-202ENST00000369409 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-202ENST00000369409 ZNF594Q96JF6 807 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-202ENST00000369409 UTP14AQ9BVJ6 771 aaKnown RBP20.61■□□□□ 0.89
PHGDH-202ENST00000369409 TNS1Q9HBL0 1735 aaKnown RBP20.61■□□□□ 0.89
PHGDH-202ENST00000369409 TFCP2Q12800 502 aa20.6■□□□□ 0.89
PHGDH-202ENST00000369409 AK7Q96M32 723 aa20.6■□□□□ 0.89
PHGDH-202ENST00000369409 SPEF2Q9C093 1822 aa20.6■□□□□ 0.89
PHGDH-202ENST00000369409 TTC41PQ6P2S7 1318 aa20.6■□□□□ 0.89
PHGDH-202ENST00000369409 PDE8AO60658 829 aa20.6■□□□□ 0.89
PHGDH-202ENST00000369409 NTSR2O95665 410 aa20.6■□□□□ 0.89
PHGDH-202ENST00000369409 RGS17Q9UGC6 210 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-202ENST00000369409 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
PHGDH-202ENST00000369409 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
PHGDH-202ENST00000369409 USPL1Q5W0Q7 1092 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms