RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 ZSCAN31Q96LW9 406 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-201ENST00000369407 SH2B1Q9NRF2 756 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-201ENST00000369407 GLRX3O76003 335 aaKnown RBP14.55□□□□□ -0.08
PHGDH-201ENST00000369407 CEP135Q66GS9 1140 aa14.55□□□□□ -0.08
PHGDH-201ENST00000369407 PLA2G4DQ86XP0 818 aa14.55□□□□□ -0.08
PHGDH-201ENST00000369407 FEZ1Q99689 392 aa14.55□□□□□ -0.08
PHGDH-201ENST00000369407 CHPF2Q9P2E5 772 aa14.55□□□□□ -0.08
PHGDH-201ENST00000369407 NMIQ13287 307 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-201ENST00000369407 CCDC8Q9H0W5 538 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-201ENST00000369407 ZNF215Q9UL58 517 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-201ENST00000369407 USP16Q9Y5T5 823 aa14.55□□□□□ -0.08
PHGDH-201ENST00000369407 KCNQ3O43525 872 aa14.54□□□□□ -0.08
PHGDH-201ENST00000369407 NECTIN1Q15223 517 aa14.54□□□□□ -0.08
PHGDH-201ENST00000369407 RUFY2Q8WXA3 655 aa14.54□□□□□ -0.08
PHGDH-201ENST00000369407 CCDC171Q6TFL3 1326 aa14.54□□□□□ -0.08
PHGDH-201ENST00000369407 ERICH4A6NGS2 130 aa14.54□□□□□ -0.08
PHGDH-201ENST00000369407 IFIT2P09913 472 aaKnown RBP14.54□□□□□ -0.08
PHGDH-201ENST00000369407 FAM69CQ0P6D2 419 aa14.54□□□□□ -0.08
PHGDH-201ENST00000369407 AACSQ86V21 672 aa14.54□□□□□ -0.08
PHGDH-201ENST00000369407 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
PHGDH-201ENST00000369407 FTOQ9C0B1 505 aaKnown RBP eCLIP14.54□□□□□ -0.08
PHGDH-201ENST00000369407 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
PHGDH-201ENST00000369407 A2ML1A8K2U0 1454 aa14.53□□□□□ -0.08
PHGDH-201ENST00000369407 C11orf57Q6ZUT1 292 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-201ENST00000369407 DDX41Q9UJV9 622 aaKnown RBP14.53□□□□□ -0.08
PHGDH-201ENST00000369407 SLC27A2O14975 620 aa14.53□□□□□ -0.08
PHGDH-201ENST00000369407 EPB41L2O43491 1005 aaKnown RBP14.53□□□□□ -0.08
PHGDH-201ENST00000369407 CLSTN2Q9H4D0 955 aa14.53□□□□□ -0.08
PHGDH-201ENST00000369407 CEP170BQ9Y4F5 1589 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-201ENST00000369407 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
PHGDH-201ENST00000369407 KIF18AQ8NI77 898 aa14.53□□□□□ -0.08
PHGDH-201ENST00000369407 EDC3Q96F86 508 aaKnown RBP14.53□□□□□ -0.08
PHGDH-201ENST00000369407 ECHDC1Q9NTX5 307 aa14.53□□□□□ -0.08
PHGDH-201ENST00000369407 A0A0D9SFI3 127 aa14.52□□□□□ -0.08
PHGDH-201ENST00000369407 ZFP91Q96JP5 570 aaPredicted RBP14.52□□□□□ -0.08
PHGDH-201ENST00000369407 LRRC2Q9BYS8 371 aa14.52□□□□□ -0.08
PHGDH-201ENST00000369407 SIL1Q9H173 461 aa14.52□□□□□ -0.08
PHGDH-201ENST00000369407 BOLA2Q9H3K6 86 aa14.52□□□□□ -0.08
PHGDH-201ENST00000369407 TLR7Q9NYK1 1049 aaKnown RBP14.52□□□□□ -0.08
PHGDH-201ENST00000369407 CHGBP05060 677 aa14.52□□□□□ -0.09
PHGDH-201ENST00000369407 SLFN14P0C7P3 912 aa14.52□□□□□ -0.09
PHGDH-201ENST00000369407 ELF2Q15723 593 aa14.52□□□□□ -0.09
PHGDH-201ENST00000369407 ARHGEF10O15013 1369 aa14.52□□□□□ -0.09
PHGDH-201ENST00000369407 ROBO2Q9HCK4 1378 aa14.52□□□□□ -0.09
PHGDH-201ENST00000369407 TTC21AQ8NDW8 1320 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 BLOC1S2Q6QNY1 142 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 TDRD7Q8NHU6 1098 aaKnown RBP14.51□□□□□ -0.09
PHGDH-201ENST00000369407 NDUFB9Q9Y6M9 179 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 RIMBP3CA6NJZ7 1639 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 RIMBP3BA6NNM3 1639 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 RIMBP3Q9UFD9 1639 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 GOLGA6L19H0YKK7 550 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 BEND3Q5T5X7 828 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 LRRC8AQ8IWT6 810 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 DNAAF4Q8WXU2 420 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 OVOS2A0A0J9YW53 1432 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 OVOS2Q6IE36 1432 aa14.51□□□□□ -0.09
PHGDH-201ENST00000369407 SKILP12757 684 aa14.5□□□□□ -0.09
PHGDH-201ENST00000369407 SCAND2PQ9GZW5 306 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-201ENST00000369407 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
PHGDH-201ENST00000369407 TOB2Q14106 344 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-201ENST00000369407 CWF19L2Q2TBE0 894 aaKnown RBP14.5□□□□□ -0.09
PHGDH-201ENST00000369407 DDX19AQ9NUU7 478 aaKnown RBP14.5□□□□□ -0.09
PHGDH-201ENST00000369407 PAXBP1Q9Y5B6 917 aa14.5□□□□□ -0.09
PHGDH-201ENST00000369407 NRKQ7Z2Y5 1582 aa14.5□□□□□ -0.09
PHGDH-201ENST00000369407 NPHP3Q7Z494 1330 aa14.5□□□□□ -0.09
PHGDH-201ENST00000369407 C3P01024 1663 aa14.5□□□□□ -0.09
PHGDH-201ENST00000369407 ZNF589Q86UQ0 364 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-201ENST00000369407 KLHDC4Q8TBB5 520 aa14.5□□□□□ -0.09
PHGDH-201ENST00000369407 TM6SF1Q9BZW5 370 aa14.5□□□□□ -0.09
PHGDH-201ENST00000369407 PTPN14Q15678 1187 aa14.49□□□□□ -0.09
PHGDH-201ENST00000369407 FBXO38Q6PIJ6 1188 aa14.49□□□□□ -0.09
PHGDH-201ENST00000369407 NGDNQ8NEJ9 315 aaKnown RBP14.49□□□□□ -0.09
PHGDH-201ENST00000369407 BRF1Q92994 677 aa14.49□□□□□ -0.09
PHGDH-201ENST00000369407 FSD1Q9BTV5 496 aa14.49□□□□□ -0.09
PHGDH-201ENST00000369407 LGR6Q9HBX8 967 aa14.49□□□□□ -0.09
PHGDH-201ENST00000369407 C9orf78Q9NZ63 289 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-201ENST00000369407 ELP1O95163 1332 aa14.49□□□□□ -0.09
PHGDH-201ENST00000369407 MAP3K5Q99683 1374 aa14.49□□□□□ -0.09
PHGDH-201ENST00000369407 XRN1Q8IZH2 1706 aaKnown RBP14.49□□□□□ -0.09
PHGDH-201ENST00000369407 CCDC69A6NI79 296 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 HSP90B1P14625 803 aaKnown RBP14.48□□□□□ -0.09
PHGDH-201ENST00000369407 PDCP20941 246 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 MAP4K1Q92918 833 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 CCDC9Q9Y3X0 531 aaKnown RBP14.48□□□□□ -0.09
PHGDH-201ENST00000369407 TTC41PQ6P2S7 1318 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 IGSF1Q8N6C5 1336 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 MON2Q7Z3U7 1717 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 H3BQV1 296 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 NLRP6P59044 892 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 IFFO2Q5TF58 517 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 LRRN4CLQ8ND94 238 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 EAF2Q96CJ1 260 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-201ENST00000369407 EVI5LQ96CN4 794 aa14.48□□□□□ -0.09
PHGDH-201ENST00000369407 MORC2Q9Y6X9 1032 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-201ENST00000369407 FLT4P35916 1363 aa14.47□□□□□ -0.09
PHGDH-201ENST00000369407 BECN2A8MW95 431 aa14.47□□□□□ -0.09
PHGDH-201ENST00000369407 RPS6KB1P23443 525 aa14.47□□□□□ -0.09
PHGDH-201ENST00000369407 USP6P35125 1406 aa14.47□□□□□ -0.09
PHGDH-201ENST00000369407 C14orf37Q86TY3 774 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms