RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 PHACTR3Q96KR7 559 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 ZSCAN31Q96LW9 406 aaPredicted RBP12.59□□□□□ -0.39
EBF3-202ENST00000368648 OGFRQ9NZT2 677 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 MARCH6O60337 910 aa12.58□□□□□ -0.39
EBF3-202ENST00000368648 AK2P54819 239 aa12.58□□□□□ -0.39
EBF3-202ENST00000368648 HOOK1Q9UJC3 728 aaKnown RBP12.58□□□□□ -0.39
EBF3-202ENST00000368648 PZPP20742 1482 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 SAFBQ15424 915 aaKnown RBP eCLIP12.58□□□□□ -0.4
EBF3-202ENST00000368648 CCDC191Q8NCU4 936 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 ANO10Q9NW15 660 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 RAI14Q9P0K7 980 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 F13A1P00488 732 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 SLC39A6Q13433 755 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 AOPEPQ8N6M6 819 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
EBF3-202ENST00000368648 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
EBF3-202ENST00000368648 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
EBF3-202ENST00000368648 POLKQ9UBT6 870 aa12.58□□□□□ -0.4
EBF3-202ENST00000368648 GTF2A1P52655 376 aaPredicted RBP12.57□□□□□ -0.4
EBF3-202ENST00000368648 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
EBF3-202ENST00000368648 FAM107BQ9H098 131 aa12.57□□□□□ -0.4
EBF3-202ENST00000368648 PYCARDQ9ULZ3 195 aa12.57□□□□□ -0.4
EBF3-202ENST00000368648 ANKRD36BQ8N2N9 1353 aa12.57□□□□□ -0.4
EBF3-202ENST00000368648 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
EBF3-202ENST00000368648 ABCA9Q8IUA7 1624 aa12.57□□□□□ -0.4
EBF3-202ENST00000368648 ZNF500O60304 480 aaPredicted RBP12.57□□□□□ -0.4
EBF3-202ENST00000368648 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
EBF3-202ENST00000368648 NPATQ14207 1427 aa12.57□□□□□ -0.4
EBF3-202ENST00000368648 ZBTB7BO15156 539 aaPredicted RBP12.57□□□□□ -0.4
EBF3-202ENST00000368648 ERLIN1O75477 346 aa12.57□□□□□ -0.4
EBF3-202ENST00000368648 SLU7O95391 586 aaKnown RBP12.57□□□□□ -0.4
EBF3-202ENST00000368648 NAA30Q147X3 362 aaPredicted RBP12.56□□□□□ -0.4
EBF3-202ENST00000368648 MYD88Q99836 296 aa12.56□□□□□ -0.4
EBF3-202ENST00000368648 PREX2Q70Z35 1606 aa12.56□□□□□ -0.4
EBF3-202ENST00000368648 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
EBF3-202ENST00000368648 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
EBF3-202ENST00000368648 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
EBF3-202ENST00000368648 VAMP4O75379 141 aa12.56□□□□□ -0.4
EBF3-202ENST00000368648 CASQ1P31415 396 aa12.56□□□□□ -0.4
EBF3-202ENST00000368648 PIP4K2AP48426 406 aaPredicted RBP12.56□□□□□ -0.4
EBF3-202ENST00000368648 ANKRD1Q15327 319 aa12.56□□□□□ -0.4
EBF3-202ENST00000368648 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
EBF3-202ENST00000368648 ZPR1O75312 459 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 KIAA0754O94854 1291 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 MNAT1P51948 309 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 PPP1R42Q7Z4L9 355 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 DDX19AQ9NUU7 478 aaKnown RBP12.55□□□□□ -0.4
EBF3-202ENST00000368648 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
EBF3-202ENST00000368648 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 CCP110O43303 1012 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 CAPN2P17655 700 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
EBF3-202ENST00000368648 KIF1BPQ96EK5 621 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 DNMT1P26358 1616 aaKnown RBP12.55□□□□□ -0.4
EBF3-202ENST00000368648 A0A087WWV3 80 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 ATP5J2-PTCD1G3V325 749 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
EBF3-202ENST00000368648 ZCRB1Q8TBF4 217 aaKnown RBP12.55□□□□□ -0.4
EBF3-202ENST00000368648 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
EBF3-202ENST00000368648 IRX3P78415 501 aaPredicted RBP12.54□□□□□ -0.4
EBF3-202ENST00000368648 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
EBF3-202ENST00000368648 NRBP1Q9UHY1 535 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 ARAP3Q8WWN8 1544 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 SMTNL1A8MU46 457 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
EBF3-202ENST00000368648 GSPT1P15170 499 aaKnown RBP12.54□□□□□ -0.4
EBF3-202ENST00000368648 FILIP1LQ4L180 1135 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 BRF1Q92994 677 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 DMTNQ08495 405 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 KARSQ15046 597 aaKnown RBP12.54□□□□□ -0.4
EBF3-202ENST00000368648 CHST3Q7LGC8 479 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 FEZ1Q99689 392 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 CRACR2AQ9BSW2 395 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 PUF60Q9UHX1 559 aaKnown RBP12.54□□□□□ -0.4
EBF3-202ENST00000368648 PALD1Q9ULE6 856 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
EBF3-202ENST00000368648 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
EBF3-202ENST00000368648 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
EBF3-202ENST00000368648 HAND2P61296 217 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 NEK11Q8NG66 645 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 ZNF526Q8TF50 670 aaPredicted RBP12.53□□□□□ -0.4
EBF3-202ENST00000368648 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
EBF3-202ENST00000368648 A0A1W2PP64 1363 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 FLIIQ13045 1269 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 DDB1Q16531 1140 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 ATP2B3Q16720 1220 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 DNAJC21Q5F1R6 531 aaKnown RBP12.53□□□□□ -0.4
EBF3-202ENST00000368648 BTG4Q9NY30 223 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 ATP2C2O75185 946 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 SLC3A2P08195 630 aaKnown RBP12.53□□□□□ -0.4
EBF3-202ENST00000368648 ARFGAP3Q9NP61 516 aa12.53□□□□□ -0.4
EBF3-202ENST00000368648 NSD2O96028 1365 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms