RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SRGNP10124 158 aa28.84■■■□□ 2.21
ECHDC1-203ENST00000368291 PPP1R42Q7Z4L9 355 aa28.84■■■□□ 2.21
ECHDC1-203ENST00000368291 TRMT2AQ8IZ69 625 aaKnown RBP28.84■■■□□ 2.21
ECHDC1-203ENST00000368291 LAMB2P55268 1798 aa28.83■■■□□ 2.21
ECHDC1-203ENST00000368291 GTF2E1P29083 439 aaPredicted RBP28.83■■■□□ 2.21
ECHDC1-203ENST00000368291 RIC3Q7Z5B4 369 aa28.83■■■□□ 2.21
ECHDC1-203ENST00000368291 UTP14AQ9BVJ6 771 aaKnown RBP28.82■■■□□ 2.2
ECHDC1-203ENST00000368291 ATP5J2-PTCD1G3V325 749 aa28.81■■■□□ 2.2
ECHDC1-203ENST00000368291 TTLL6Q8N841 843 aa28.81■■■□□ 2.2
ECHDC1-203ENST00000368291 ZNF622Q969S3 477 aaKnown RBP eCLIP28.81■■■□□ 2.21e-7■□□□□ 9.8
ECHDC1-203ENST00000368291 ADCY9O60503 1353 aa28.8■■■□□ 2.2
ECHDC1-203ENST00000368291 DDX60Q8IY21 1712 aaKnown RBP28.8■■■□□ 2.2
ECHDC1-203ENST00000368291 DDX58O95786 925 aaKnown RBP28.79■■■□□ 2.2
ECHDC1-203ENST00000368291 TRIM28Q13263 835 aaKnown RBP28.79■■■□□ 2.2
ECHDC1-203ENST00000368291 STYK1Q6J9G0 422 aa28.79■■■□□ 2.2
ECHDC1-203ENST00000368291 SYNE4Q8N205 404 aa28.79■■■□□ 2.2
ECHDC1-203ENST00000368291 ZNF428Q96B54 188 aa28.79■■■□□ 2.2
ECHDC1-203ENST00000368291 PI4KAP2A4QPH2 592 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 YY1P25490 414 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 CRY2Q49AN0 593 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 KSR2Q6VAB6 950 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 PI4KAP1Q8N8J0 262 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 MASTLQ96GX5 879 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 METTL22Q9BUU2 404 aaPredicted RBP28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 MAP3K2Q9Y2U5 619 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 SBF1O95248 1867 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 RNF123Q5XPI4 1314 aa28.78■■■□□ 2.2
ECHDC1-203ENST00000368291 FLIIQ13045 1269 aa28.77■■■□□ 2.2
ECHDC1-203ENST00000368291 SLC10A5Q5PT55 438 aa28.77■■■□□ 2.2
ECHDC1-203ENST00000368291 MYD88Q99836 296 aa28.77■■■□□ 2.2
ECHDC1-203ENST00000368291 C3orf67Q6ZVT6 689 aa28.76■■■□□ 2.2
ECHDC1-203ENST00000368291 TRMT112Q9UI30 125 aaKnown RBP28.76■■■□□ 2.2
ECHDC1-203ENST00000368291 NPR1P16066 1061 aa28.75■■■□□ 2.19
ECHDC1-203ENST00000368291 FER1L6Q2WGJ9 1857 aa28.75■■■□□ 2.19
ECHDC1-203ENST00000368291 CCDC88AQ3V6T2 1871 aa28.74■■■□□ 2.19
ECHDC1-203ENST00000368291 HNRNPUQ00839 825 aaKnown RBP eCLIP28.74■■■□□ 2.19
ECHDC1-203ENST00000368291 ARHGAP27Q6ZUM4 889 aa28.74■■■□□ 2.19
ECHDC1-203ENST00000368291 CNKSR1Q969H4 720 aa28.74■■■□□ 2.19
ECHDC1-203ENST00000368291 SH3TC1Q8TE82 1336 aa28.73■■■□□ 2.19
ECHDC1-203ENST00000368291 IGKV5-2P06315 115 aa28.72■■■□□ 2.19
ECHDC1-203ENST00000368291 PRPF40BQ6NWY9 871 aaKnown RBP28.72■■■□□ 2.19
ECHDC1-203ENST00000368291 FAM89AQ96GI7 184 aa28.72■■■□□ 2.19
ECHDC1-203ENST00000368291 TAF1P21675 1872 aa28.72■■■□□ 2.19
ECHDC1-203ENST00000368291 HCLS1P14317 486 aaPredicted RBP28.71■■■□□ 2.19
ECHDC1-203ENST00000368291 FKBP5Q13451 457 aaPredicted RBP28.71■■■□□ 2.19
ECHDC1-203ENST00000368291 CCDC191Q8NCU4 936 aa28.71■■■□□ 2.19
ECHDC1-203ENST00000368291 HOXA10P31260 410 aaPredicted RBP28.7■■■□□ 2.18
ECHDC1-203ENST00000368291 NLRP3Q96P20 1036 aa28.7■■■□□ 2.18
ECHDC1-203ENST00000368291 C7orf43Q8WVR3 580 aa28.69■■■□□ 2.18
ECHDC1-203ENST00000368291 C21orf2O43822 256 aa28.68■■■□□ 2.18
ECHDC1-203ENST00000368291 RTL5Q5HYW3 569 aaPredicted RBP28.68■■■□□ 2.18
ECHDC1-203ENST00000368291 ZNF219Q9P2Y4 722 aaPredicted RBP28.68■■■□□ 2.18
ECHDC1-203ENST00000368291 ZBTB38Q8NAP3 1195 aaPredicted RBP28.67■■■□□ 2.18
ECHDC1-203ENST00000368291 DNAAF4Q8WXU2 420 aa28.67■■■□□ 2.18
ECHDC1-203ENST00000368291 CWC25Q9NXE8 425 aaPredicted RBP28.67■■■□□ 2.18
ECHDC1-203ENST00000368291 ALDH1B1P30837 517 aa28.66■■■□□ 2.18
ECHDC1-203ENST00000368291 CWF19L2Q2TBE0 894 aaKnown RBP28.66■■■□□ 2.18
ECHDC1-203ENST00000368291 MRPL50Q8N5N7 158 aaKnown RBP28.66■■■□□ 2.18
ECHDC1-203ENST00000368291 SSH1Q8WYL5 1049 aa28.66■■■□□ 2.18
ECHDC1-203ENST00000368291 RPGRQ92834 1020 aaKnown RBP28.66■■■□□ 2.18
ECHDC1-203ENST00000368291 NEURL1BA8MQ27 555 aa28.65■■■□□ 2.18
ECHDC1-203ENST00000368291 MYH3P11055 1940 aa28.64■■■□□ 2.18
ECHDC1-203ENST00000368291 F6X3S4 739 aa28.64■■■□□ 2.18
ECHDC1-203ENST00000368291 NFKBIEO00221 500 aa28.64■■■□□ 2.18
ECHDC1-203ENST00000368291 PCCAP05165 728 aaPredicted RBP28.64■■■□□ 2.18
ECHDC1-203ENST00000368291 RASSF7Q02833 373 aa28.64■■■□□ 2.18
ECHDC1-203ENST00000368291 NEXNQ0ZGT2 675 aa28.64■■■□□ 2.18
ECHDC1-203ENST00000368291 CRAMP1Q96RY5 1269 aa28.64■■■□□ 2.18
ECHDC1-203ENST00000368291 PRELPP51888 382 aa28.63■■■□□ 2.17
ECHDC1-203ENST00000368291 JARID2Q92833 1246 aaPredicted RBP28.63■■■□□ 2.17
ECHDC1-203ENST00000368291 DICER1Q9UPY3 1922 aaKnown RBP28.63■■■□□ 2.17
ECHDC1-203ENST00000368291 IRS4O14654 1257 aaPredicted RBP28.62■■■□□ 2.17
ECHDC1-203ENST00000368291 OLFM4Q6UX06 510 aa28.62■■■□□ 2.17
ECHDC1-203ENST00000368291 CT47B1P0C2W7 299 aaPredicted RBP28.62■■■□□ 2.17
ECHDC1-203ENST00000368291 ALDH1L2Q3SY69 923 aa28.62■■■□□ 2.17
ECHDC1-203ENST00000368291 RBM17Q96I25 401 aaKnown RBP28.62■■■□□ 2.17
ECHDC1-203ENST00000368291 COL4A1P02462 1669 aa28.61■■■□□ 2.17
ECHDC1-203ENST00000368291 SNED1Q8TER0 1413 aa28.61■■■□□ 2.17
ECHDC1-203ENST00000368291 ZBED9Q6R2W3 1325 aa28.61■■■□□ 2.17
ECHDC1-203ENST00000368291 SF3B3Q15393 1217 aaKnown RBP28.61■■■□□ 2.17
ECHDC1-203ENST00000368291 LINS1Q8NG48 757 aa28.61■■■□□ 2.17
ECHDC1-203ENST00000368291 BCL2L13Q9BXK5 485 aa28.61■■■□□ 2.17
ECHDC1-203ENST00000368291 ABCC4O15439 1325 aa28.6■■■□□ 2.17
ECHDC1-203ENST00000368291 SLC51AQ86UW1 340 aa28.6■■■□□ 2.17
ECHDC1-203ENST00000368291 BEND3Q5T5X7 828 aa28.59■■■□□ 2.17
ECHDC1-203ENST00000368291 C9orf131Q5VYM1 1079 aa28.59■■■□□ 2.17
ECHDC1-203ENST00000368291 ZNF784Q8NCA9 323 aaPredicted RBP28.59■■■□□ 2.17
ECHDC1-203ENST00000368291 CDHR2Q9BYE9 1310 aa28.58■■■□□ 2.17
ECHDC1-203ENST00000368291 GCKRQ14397 625 aa28.58■■■□□ 2.17
ECHDC1-203ENST00000368291 SOGA3Q5TF21 947 aa28.58■■■□□ 2.17
ECHDC1-203ENST00000368291 LTBP3Q9NS15 1303 aa28.57■■■□□ 2.16
ECHDC1-203ENST00000368291 H7C1W4 665 aa28.57■■■□□ 2.16
ECHDC1-203ENST00000368291 CCDC93Q567U6 631 aa28.56■■■□□ 2.16
ECHDC1-203ENST00000368291 TIAM2Q8IVF5 1701 aa28.56■■■□□ 2.16
ECHDC1-203ENST00000368291 PDE8AO60658 829 aa28.55■■■□□ 2.16
ECHDC1-203ENST00000368291 CASP7P55210 303 aa28.55■■■□□ 2.16
ECHDC1-203ENST00000368291 SMC4Q9NTJ3 1288 aa28.55■■■□□ 2.16
ECHDC1-203ENST00000368291 RNF181Q9P0P0 153 aa28.55■■■□□ 2.16
ECHDC1-203ENST00000368291 PTPRCP08575 1304 aa28.54■■■□□ 2.16
ECHDC1-203ENST00000368291 PPEF1O14829 653 aaPredicted RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms