RNA–Protein interactions for RNA: ENST00000368261.7

CCT3-205, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 5

Gene CCT3, Length 863 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-205ENST00000368261 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
CCT3-205ENST00000368261 PPP1R42Q7Z4L9 355 aa13.65□□□□□ -0.22
CCT3-205ENST00000368261 GCC1Q96CN9 775 aa13.65□□□□□ -0.22
CCT3-205ENST00000368261 LRP5O75197 1615 aa13.64□□□□□ -0.23
CCT3-205ENST00000368261 A0A087WZG4 1122 aa13.64□□□□□ -0.23
CCT3-205ENST00000368261 RGL2O15211 777 aa13.64□□□□□ -0.23
CCT3-205ENST00000368261 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
CCT3-205ENST00000368261 FOXO4P98177 505 aa13.64□□□□□ -0.23
CCT3-205ENST00000368261 BICC1Q9H694 974 aaKnown RBP13.64□□□□□ -0.23
CCT3-205ENST00000368261 A0A1B0GUL6 1792 aa13.63□□□□□ -0.23
CCT3-205ENST00000368261 COL4A1P02462 1669 aa13.63□□□□□ -0.23
CCT3-205ENST00000368261 GNPATO15228 680 aa13.63□□□□□ -0.23
CCT3-205ENST00000368261 PCCAP05165 728 aaPredicted RBP13.63□□□□□ -0.23
CCT3-205ENST00000368261 HSP90AB3PQ58FF7 597 aa13.63□□□□□ -0.23
CCT3-205ENST00000368261 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
CCT3-205ENST00000368261 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
CCT3-205ENST00000368261 SPEF2Q9C093 1822 aa13.62□□□□□ -0.23
CCT3-205ENST00000368261 HMMRO75330 724 aa13.62□□□□□ -0.23
CCT3-205ENST00000368261 GPTP24298 496 aa13.62□□□□□ -0.23
CCT3-205ENST00000368261 SYNE4Q8N205 404 aa13.62□□□□□ -0.23
CCT3-205ENST00000368261 PLA2G12BQ9BX93 195 aa13.62□□□□□ -0.23
CCT3-205ENST00000368261 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
CCT3-205ENST00000368261 NARFQ9UHQ1 456 aa13.62□□□□□ -0.23
CCT3-205ENST00000368261 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
CCT3-205ENST00000368261 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
CCT3-205ENST00000368261 APBA3O96018 575 aa13.61□□□□□ -0.23
CCT3-205ENST00000368261 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
CCT3-205ENST00000368261 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
CCT3-205ENST00000368261 CHD1LQ86WJ1 897 aa13.61□□□□□ -0.23
CCT3-205ENST00000368261 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
CCT3-205ENST00000368261 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
CCT3-205ENST00000368261 SALL3Q9BXA9 1300 aa13.61□□□□□ -0.23
CCT3-205ENST00000368261 USP42Q9H9J4 1324 aaKnown RBP13.61□□□□□ -0.23
CCT3-205ENST00000368261 SRGAP3O43295 1099 aa13.6□□□□□ -0.23
CCT3-205ENST00000368261 NTSR2O95665 410 aa13.6□□□□□ -0.23
CCT3-205ENST00000368261 TAF1P21675 1872 aa13.6□□□□□ -0.23
CCT3-205ENST00000368261 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
CCT3-205ENST00000368261 ZBTB38Q8NAP3 1195 aaPredicted RBP13.6□□□□□ -0.23
CCT3-205ENST00000368261 EXOC6BQ9Y2D4 811 aa13.6□□□□□ -0.23
CCT3-205ENST00000368261 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
CCT3-205ENST00000368261 ANKRD45Q5TZF3 282 aa13.59□□□□□ -0.23
CCT3-205ENST00000368261 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
CCT3-205ENST00000368261 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
CCT3-205ENST00000368261 CAMKK2Q96RR4 588 aa13.59□□□□□ -0.23
CCT3-205ENST00000368261 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
CCT3-205ENST00000368261 PA2G4Q9UQ80 394 aaKnown RBP13.59□□□□□ -0.23
CCT3-205ENST00000368261 HDAC5Q9UQL6 1122 aa13.59□□□□□ -0.23
CCT3-205ENST00000368261 ANKRD31Q8N7Z5 1873 aa13.59□□□□□ -0.23
CCT3-205ENST00000368261 SMARCA5O60264 1052 aaPredicted RBP13.58□□□□□ -0.24
CCT3-205ENST00000368261 CSF1RP07333 972 aa13.58□□□□□ -0.24
CCT3-205ENST00000368261 ADRA2BP18089 450 aa13.58□□□□□ -0.24
CCT3-205ENST00000368261 RGS3P49796 1198 aa13.58□□□□□ -0.24
CCT3-205ENST00000368261 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
CCT3-205ENST00000368261 TBC1D9BQ66K14 1250 aa13.58□□□□□ -0.24
CCT3-205ENST00000368261 OTUD7AQ8TE49 926 aaPredicted RBP13.58□□□□□ -0.24
CCT3-205ENST00000368261 AK7Q96M32 723 aa13.58□□□□□ -0.24
CCT3-205ENST00000368261 ARXQ96QS3 562 aa13.58□□□□□ -0.24
CCT3-205ENST00000368261 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.58□□□□□ -0.24
CCT3-205ENST00000368261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
CCT3-205ENST00000368261 SSFA2P28290 1259 aa13.57□□□□□ -0.24
CCT3-205ENST00000368261 PTPN12Q05209 780 aaKnown RBP13.57□□□□□ -0.24
CCT3-205ENST00000368261 PARP10Q53GL7 1025 aa13.57□□□□□ -0.24
CCT3-205ENST00000368261 LMBR1LQ6UX01 489 aa13.57□□□□□ -0.24
CCT3-205ENST00000368261 COPRSQ9NQ92 184 aa13.57□□□□□ -0.24
CCT3-205ENST00000368261 ABCC12Q96J65 1359 aa13.57□□□□□ -0.24
CCT3-205ENST00000368261 C16orf71Q8IYS4 520 aaPredicted RBP13.56□□□□□ -0.24
CCT3-205ENST00000368261 KLHDC4Q8TBB5 520 aa13.56□□□□□ -0.24
CCT3-205ENST00000368261 NIP7Q9Y221 180 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCT3-205ENST00000368261 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
CCT3-205ENST00000368261 AK9Q5TCS8 1911 aa13.55□□□□□ -0.24
CCT3-205ENST00000368261 IRS4O14654 1257 aaPredicted RBP13.55□□□□□ -0.24
CCT3-205ENST00000368261 SURF6O75683 361 aaKnown RBP13.55□□□□□ -0.24
CCT3-205ENST00000368261 PHF14O94880 888 aa13.55□□□□□ -0.24
CCT3-205ENST00000368261 SASH1O94885 1247 aa13.55□□□□□ -0.24
CCT3-205ENST00000368261 EZH2Q15910 746 aaKnown RBP13.55□□□□□ -0.24
CCT3-205ENST00000368261 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
CCT3-205ENST00000368261 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
CCT3-205ENST00000368261 PLEKHM2Q8IWE5 1019 aa13.55□□□□□ -0.24
CCT3-205ENST00000368261 ANO8Q9HCE9 1232 aaPredicted RBP13.55□□□□□ -0.24
CCT3-205ENST00000368261 TRMT112Q9UI30 125 aaKnown RBP13.55□□□□□ -0.24
CCT3-205ENST00000368261 ZNF652Q9Y2D9 606 aa13.55□□□□□ -0.24
CCT3-205ENST00000368261 RAB11FIP3O75154 756 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 GYS1P13807 737 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 CTSWP56202 376 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 TTLL11Q8NHH1 800 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 RHPN1Q8TCX5 695 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 UTP14AQ9BVJ6 771 aaKnown RBP13.54□□□□□ -0.24
CCT3-205ENST00000368261 SH3TC1Q8TE82 1336 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
CCT3-205ENST00000368261 PDE8AO60658 829 aa13.53□□□□□ -0.24
CCT3-205ENST00000368261 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
CCT3-205ENST00000368261 NFIXQ14938 502 aa13.53□□□□□ -0.24
CCT3-205ENST00000368261 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
CCT3-205ENST00000368261 ATG9AQ7Z3C6 839 aa13.53□□□□□ -0.24
CCT3-205ENST00000368261 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
CCT3-205ENST00000368261 LRRCC1Q9C099 1032 aa13.53□□□□□ -0.24
CCT3-205ENST00000368261 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
CCT3-205ENST00000368261 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms