RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 MICU3Q86XE3 530 aa14.41□□□□□ -0.1
PTPRK-203ENST00000368207 CTCFLQ8NI51 663 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-203ENST00000368207 USP16Q9Y5T5 823 aa14.41□□□□□ -0.1
PTPRK-203ENST00000368207 GOLGA8AA7E2F4 631 aa14.4□□□□□ -0.1
PTPRK-203ENST00000368207 HMGN5P82970 282 aaKnown RBP14.4□□□□□ -0.1
PTPRK-203ENST00000368207 HELBQ8NG08 1087 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-203ENST00000368207 MAGEC2Q9UBF1 373 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-203ENST00000368207 BAG4O95429 457 aaKnown RBP14.4□□□□□ -0.1
PTPRK-203ENST00000368207 CCDC152Q4G0S7 254 aa14.4□□□□□ -0.1
PTPRK-203ENST00000368207 DZIP3Q86Y13 1208 aaKnown RBP14.4□□□□□ -0.1
PTPRK-203ENST00000368207 ZMYM4Q5VZL5 1548 aa14.4□□□□□ -0.1
PTPRK-203ENST00000368207 SOS1Q07889 1333 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-203ENST00000368207 METP08581 1390 aa14.4□□□□□ -0.1
PTPRK-203ENST00000368207 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
PTPRK-203ENST00000368207 CRACR2BQ8N4Y2 399 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-203ENST00000368207 BICC1Q9H694 974 aaKnown RBP14.39□□□□□ -0.11
PTPRK-203ENST00000368207 ZNF444Q8N0Y2 327 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-203ENST00000368207 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-203ENST00000368207 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
PTPRK-203ENST00000368207 CKAP2LQ8IYA6 745 aa14.38□□□□□ -0.11
PTPRK-203ENST00000368207 ERCC6L2Q5T890 1561 aa14.38□□□□□ -0.11
PTPRK-203ENST00000368207 TMEM67Q5HYA8 995 aa14.38□□□□□ -0.11
PTPRK-203ENST00000368207 ZNF287Q9HBT7 754 aa14.38□□□□□ -0.11
PTPRK-203ENST00000368207 SBNO2Q9Y2G9 1366 aa14.38□□□□□ -0.11
PTPRK-203ENST00000368207 NMIQ13287 307 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-203ENST00000368207 KLHDC4Q8TBB5 520 aa14.38□□□□□ -0.11
PTPRK-203ENST00000368207 HMG20BQ9P0W2 317 aa14.38□□□□□ -0.11
PTPRK-203ENST00000368207 ORC3Q9UBD5 711 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-203ENST00000368207 TFCP2Q12800 502 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 ANKRD18AQ8IVF6 992 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 UQCRFS1P1P0C7P4 283 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 SETDB2Q96T68 719 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 PCDH11XQ9BZA7 1347 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 PCDH11YQ9BZA8 1340 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 BLMP54132 1417 aaPredicted RBP14.37□□□□□ -0.11
PTPRK-203ENST00000368207 USP19O94966 1318 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 SLC9C2Q5TAH2 1124 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 NCOA7Q8NI08 942 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 FAM89AQ96GI7 184 aa14.37□□□□□ -0.11
PTPRK-203ENST00000368207 STIM1Q13586 685 aa14.36□□□□□ -0.11
PTPRK-203ENST00000368207 DACH1Q9UI36 760 aa14.36□□□□□ -0.11
PTPRK-203ENST00000368207 IRS4O14654 1257 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-203ENST00000368207 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
PTPRK-203ENST00000368207 CCDC183Q5T5S1 534 aa14.36□□□□□ -0.11
PTPRK-203ENST00000368207 MFSD6Q6ZSS7 791 aa14.36□□□□□ -0.11
PTPRK-203ENST00000368207 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
PTPRK-203ENST00000368207 ESPNB1AK53 854 aa14.36□□□□□ -0.11
PTPRK-203ENST00000368207 A1BGP04217 495 aa14.36□□□□□ -0.11
PTPRK-203ENST00000368207 IARSP41252 1262 aaKnown RBP14.36□□□□□ -0.11
PTPRK-203ENST00000368207 SMARCC1Q92922 1105 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-203ENST00000368207 ERVK-7P63135 1459 aa14.35□□□□□ -0.11
PTPRK-203ENST00000368207 NBPF7P0C2Y1 421 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 DHX8Q14562 1220 aaKnown RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 PAG1Q9NWQ8 432 aa14.35□□□□□ -0.11
PTPRK-203ENST00000368207 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 KLF18A0A0U1RQI7 1052 aa14.35□□□□□ -0.11
PTPRK-203ENST00000368207 CT47A1Q5JQC4 288 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 SMARCE1Q969G3 411 aa14.35□□□□□ -0.11
PTPRK-203ENST00000368207 CLASP1Q7Z460 1538 aa14.35□□□□□ -0.11
PTPRK-203ENST00000368207 CYP7A1P22680 504 aa14.35□□□□□ -0.11
PTPRK-203ENST00000368207 HMGB2P26583 209 aaKnown RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 SSRP1Q08945 709 aaKnown RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 GPS2Q13227 327 aa14.35□□□□□ -0.11
PTPRK-203ENST00000368207 PPFIBP1Q86W92 1011 aa14.35□□□□□ -0.11
PTPRK-203ENST00000368207 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 ZNF496Q96IT1 587 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 SEC63Q9UGP8 760 aaKnown RBP14.35□□□□□ -0.11
PTPRK-203ENST00000368207 TSPY2A6NKD2 308 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 CHMLP26374 656 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 CATIPQ7Z7H3 387 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 UTP14AQ9BVJ6 771 aaKnown RBP14.34□□□□□ -0.11
PTPRK-203ENST00000368207 PLA2R1Q13018 1463 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 TTC41PQ6P2S7 1318 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 PNMA6EA0A0J9YXQ4 647 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 ZFYP08048 801 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-203ENST00000368207 TIMM10P62072 90 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 ZNF622Q969S3 477 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTPRK-203ENST00000368207 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 MCM5P33992 734 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 METAP2P50579 478 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTPRK-203ENST00000368207 KCNQ3O43525 872 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 ZNF76P36508 570 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 ANAPC15P60006 121 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 FSIP1Q8NA03 581 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 TANGO6Q9C0B7 1094 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 SLAIN2Q9P270 581 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 LMTK3Q96Q04 1460 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 MLH3Q9UHC1 1453 aa14.34□□□□□ -0.11
PTPRK-203ENST00000368207 CCDC96Q2M329 555 aa14.33□□□□□ -0.11
PTPRK-203ENST00000368207 KLHL10Q6JEL2 608 aa14.33□□□□□ -0.11
PTPRK-203ENST00000368207 IL17REQ8NFR9 667 aa14.33□□□□□ -0.11
PTPRK-203ENST00000368207 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.12
PTPRK-203ENST00000368207 LDHCP07864 332 aa14.33□□□□□ -0.12
PTPRK-203ENST00000368207 SLC26A6Q9BXS9 759 aa14.33□□□□□ -0.12
PTPRK-203ENST00000368207 PANK2Q9BZ23 570 aa14.33□□□□□ -0.12
PTPRK-203ENST00000368207 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.12
PTPRK-203ENST00000368207 CFAP100Q494V2 611 aa14.33□□□□□ -0.12
PTPRK-203ENST00000368207 CHST3Q7LGC8 479 aa14.33□□□□□ -0.12
PTPRK-203ENST00000368207 BABAM1Q9NWV8 329 aa14.33□□□□□ -0.12
PTPRK-203ENST00000368207 NLRP5P59047 1200 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms