RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 TTLL6Q8N841 843 aa16.14■□□□□ 0.17
LMX1A-203ENST00000367893 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
LMX1A-203ENST00000367893 RNF181Q9P0P0 153 aa16.14■□□□□ 0.17
LMX1A-203ENST00000367893 TNNQ9UQP3 1299 aa16.14■□□□□ 0.17
LMX1A-203ENST00000367893 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
LMX1A-203ENST00000367893 NUP98P52948 1817 aa16.13■□□□□ 0.17
LMX1A-203ENST00000367893 H0YIN7 160 aa16.13■□□□□ 0.17
LMX1A-203ENST00000367893 RLBP1P12271 317 aa16.13■□□□□ 0.17
LMX1A-203ENST00000367893 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
LMX1A-203ENST00000367893 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
LMX1A-203ENST00000367893 DZIP1LQ8IYY4 767 aaKnown RBP16.13■□□□□ 0.17
LMX1A-203ENST00000367893 CCDC24Q8N4L8 307 aa16.13■□□□□ 0.17
LMX1A-203ENST00000367893 PLBD2Q8NHP8 589 aa16.13■□□□□ 0.17
LMX1A-203ENST00000367893 PI4KAP2A4QPH2 592 aa16.12■□□□□ 0.17
LMX1A-203ENST00000367893 AIMP1Q12904 312 aaKnown RBP16.12■□□□□ 0.17
LMX1A-203ENST00000367893 PI4KAP1Q8N8J0 262 aa16.12■□□□□ 0.17
LMX1A-203ENST00000367893 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
LMX1A-203ENST00000367893 IBTKQ9P2D0 1353 aaPredicted RBP16.11■□□□□ 0.17
LMX1A-203ENST00000367893 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 F6X3S4 739 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 NFKBIEO00221 500 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 RGL2O15211 777 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 TOMM70O94826 608 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 INTS3Q68E01 1043 aaKnown RBP16.11■□□□□ 0.17
LMX1A-203ENST00000367893 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 PANK1Q8TE04 598 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 DNAAF4Q8WXU2 420 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 MAP3K2Q9Y2U5 619 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 ANKRD36CQ5JPF3 1778 aa16.11■□□□□ 0.17
LMX1A-203ENST00000367893 MAP3K15Q6ZN16 1313 aa16.1■□□□□ 0.17
LMX1A-203ENST00000367893 PDE6BP35913 854 aa16.1■□□□□ 0.17
LMX1A-203ENST00000367893 CNBD1Q8NA66 436 aa16.1■□□□□ 0.17
LMX1A-203ENST00000367893 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
LMX1A-203ENST00000367893 PDZRN3Q9UPQ7 1066 aa16.1■□□□□ 0.17
LMX1A-203ENST00000367893 DLEC1Q9Y238 1755 aa16.1■□□□□ 0.17
LMX1A-203ENST00000367893 LMNB1P20700 586 aa16.09■□□□□ 0.17
LMX1A-203ENST00000367893 KIF6Q6ZMV9 814 aa16.09■□□□□ 0.17
LMX1A-203ENST00000367893 RIC3Q7Z5B4 369 aa16.09■□□□□ 0.17
LMX1A-203ENST00000367893 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
LMX1A-203ENST00000367893 FTSJ3Q8IY81 847 aaKnown RBP16.09■□□□□ 0.17
LMX1A-203ENST00000367893 TMEM57Q8N5G2 664 aa16.09■□□□□ 0.17
LMX1A-203ENST00000367893 METTL22Q9BUU2 404 aaPredicted RBP16.09■□□□□ 0.17
LMX1A-203ENST00000367893 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.17
LMX1A-203ENST00000367893 ANKRD31Q8N7Z5 1873 aa16.08■□□□□ 0.17
LMX1A-203ENST00000367893 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
LMX1A-203ENST00000367893 BEND3Q5T5X7 828 aa16.08■□□□□ 0.16
LMX1A-203ENST00000367893 SRGNP10124 158 aa16.07■□□□□ 0.16
LMX1A-203ENST00000367893 MVPQ14764 893 aaKnown RBP16.07■□□□□ 0.16
LMX1A-203ENST00000367893 GIGYF2Q6Y7W6 1299 aaKnown RBP16.07■□□□□ 0.16
LMX1A-203ENST00000367893 ZNF622Q969S3 477 aaKnown RBP eCLIP16.07■□□□□ 0.16
LMX1A-203ENST00000367893 COL11A2P13942 1736 aaPredicted RBP16.07■□□□□ 0.16
LMX1A-203ENST00000367893 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
LMX1A-203ENST00000367893 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
LMX1A-203ENST00000367893 ST5P78524 1137 aa16.06■□□□□ 0.16
LMX1A-203ENST00000367893 TRIM28Q13263 835 aaKnown RBP16.06■□□□□ 0.16
LMX1A-203ENST00000367893 HLFQ16534 295 aa16.06■□□□□ 0.16
LMX1A-203ENST00000367893 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
LMX1A-203ENST00000367893 LINS1Q8NG48 757 aa16.06■□□□□ 0.16
LMX1A-203ENST00000367893 RBM46Q8TBY0 533 aaKnown RBP16.06■□□□□ 0.16
LMX1A-203ENST00000367893 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
LMX1A-203ENST00000367893 ZNF652Q9Y2D9 606 aa16.06■□□□□ 0.16
LMX1A-203ENST00000367893 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
LMX1A-203ENST00000367893 C21orf2O43822 256 aa16.05■□□□□ 0.16
LMX1A-203ENST00000367893 ALDH1L1O75891 902 aa16.05■□□□□ 0.16
LMX1A-203ENST00000367893 IGKV5-2P06315 115 aa16.05■□□□□ 0.16
LMX1A-203ENST00000367893 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
LMX1A-203ENST00000367893 SLC4A10Q6U841 1118 aa16.05■□□□□ 0.16
LMX1A-203ENST00000367893 NBPF5PQ86XG9 351 aaPredicted RBP16.05■□□□□ 0.16
LMX1A-203ENST00000367893 CRBNQ96SW2 442 aa16.05■□□□□ 0.16
LMX1A-203ENST00000367893 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
LMX1A-203ENST00000367893 SRCIN1Q9C0H9 1055 aa16.05■□□□□ 0.16
LMX1A-203ENST00000367893 NEFLP07196 543 aa16.04■□□□□ 0.16
LMX1A-203ENST00000367893 IRX6P78412 446 aaPredicted RBP16.04■□□□□ 0.16
LMX1A-203ENST00000367893 NEXNQ0ZGT2 675 aa16.04■□□□□ 0.16
LMX1A-203ENST00000367893 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
LMX1A-203ENST00000367893 PRPF40BQ6NWY9 871 aaKnown RBP16.04■□□□□ 0.16
LMX1A-203ENST00000367893 C7orf43Q8WVR3 580 aa16.04■□□□□ 0.16
LMX1A-203ENST00000367893 MASTLQ96GX5 879 aa16.04■□□□□ 0.16
LMX1A-203ENST00000367893 RRAGCQ9HB90 399 aa16.04■□□□□ 0.16
LMX1A-203ENST00000367893 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
LMX1A-203ENST00000367893 NIP7Q9Y221 180 aaKnown RBP eCLIP16.04■□□□□ 0.16
LMX1A-203ENST00000367893 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
LMX1A-203ENST00000367893 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
LMX1A-203ENST00000367893 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
LMX1A-203ENST00000367893 ZBTB7BO15156 539 aaPredicted RBP16.03■□□□□ 0.16
LMX1A-203ENST00000367893 ERICH6BQ5W0A0 696 aa16.03■□□□□ 0.16
LMX1A-203ENST00000367893 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
LMX1A-203ENST00000367893 ZNF34Q8IZ26 560 aa16.03■□□□□ 0.16
LMX1A-203ENST00000367893 CNKSR1Q969H4 720 aa16.03■□□□□ 0.16
LMX1A-203ENST00000367893 MYD88Q99836 296 aa16.03■□□□□ 0.16
LMX1A-203ENST00000367893 APLP1P51693 650 aa16.02■□□□□ 0.16
LMX1A-203ENST00000367893 AAMPQ13685 434 aa16.02■□□□□ 0.16
LMX1A-203ENST00000367893 EXOC6Q8TAG9 804 aa16.02■□□□□ 0.16
LMX1A-203ENST00000367893 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
LMX1A-203ENST00000367893 SBF1O95248 1867 aa16.02■□□□□ 0.15
LMX1A-203ENST00000367893 NPHP1O15259 732 aa16.01■□□□□ 0.15
LMX1A-203ENST00000367893 FSTL1Q12841 308 aa16.01■□□□□ 0.15
LMX1A-203ENST00000367893 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
LMX1A-203ENST00000367893 TPTE2Q6XPS3 522 aa16.01■□□□□ 0.15
LMX1A-203ENST00000367893 DNAJC5GQ8N7S2 189 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms