RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 ERVV-1B6SEH8 477 aa15.29■□□□□ 0.04
CAPN9-203ENST00000366666 EPHA10Q5JZY3 1008 aa15.29■□□□□ 0.04
CAPN9-203ENST00000366666 DEFB132Q7Z7B7 95 aa15.29■□□□□ 0.04
CAPN9-203ENST00000366666 BCL2L12Q9HB09 334 aa15.29■□□□□ 0.04
CAPN9-203ENST00000366666 CASP7P55210 303 aa15.29■□□□□ 0.04
CAPN9-203ENST00000366666 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
CAPN9-203ENST00000366666 HDAC1Q13547 482 aaPredicted RBP15.28■□□□□ 0.04
CAPN9-203ENST00000366666 USPL1Q5W0Q7 1092 aa15.28■□□□□ 0.04
CAPN9-203ENST00000366666 CWC25Q9NXE8 425 aaPredicted RBP15.28■□□□□ 0.04
CAPN9-203ENST00000366666 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.28■□□□□ 0.04
CAPN9-203ENST00000366666 CENPQQ7L2Z9 268 aaPredicted RBP15.28■□□□□ 0.04
CAPN9-203ENST00000366666 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
CAPN9-203ENST00000366666 CCDC191Q8NCU4 936 aa15.28■□□□□ 0.04
CAPN9-203ENST00000366666 CAMKK2Q96RR4 588 aa15.28■□□□□ 0.04
CAPN9-203ENST00000366666 ZNF34Q8IZ26 560 aa15.27■□□□□ 0.04
CAPN9-203ENST00000366666 RWDD1Q9H446 243 aaPredicted RBP15.27■□□□□ 0.04
CAPN9-203ENST00000366666 BICC1Q9H694 974 aaKnown RBP15.27■□□□□ 0.04
CAPN9-203ENST00000366666 FAM177BA6PVY3 158 aa15.26■□□□□ 0.03
CAPN9-203ENST00000366666 H7C1W4 665 aa15.26■□□□□ 0.03
CAPN9-203ENST00000366666 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
CAPN9-203ENST00000366666 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
CAPN9-203ENST00000366666 NARFQ9UHQ1 456 aa15.26■□□□□ 0.03
CAPN9-203ENST00000366666 TRAPPC3LQ5T215 181 aa15.25■□□□□ 0.03
CAPN9-203ENST00000366666 PPP1R42Q7Z4L9 355 aa15.25■□□□□ 0.03
CAPN9-203ENST00000366666 RPAP2Q8IXW5 612 aaPredicted RBP15.25■□□□□ 0.03
CAPN9-203ENST00000366666 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
CAPN9-203ENST00000366666 IBTKQ9P2D0 1353 aaPredicted RBP15.25■□□□□ 0.03
CAPN9-203ENST00000366666 ATP8B2P98198 1209 aa15.25■□□□□ 0.03
CAPN9-203ENST00000366666 SUSD4Q5VX71 490 aa15.25■□□□□ 0.03
CAPN9-203ENST00000366666 TBC1D9BQ66K14 1250 aa15.25■□□□□ 0.03
CAPN9-203ENST00000366666 BICDL1Q6ZP65 573 aa15.25■□□□□ 0.03
CAPN9-203ENST00000366666 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
CAPN9-203ENST00000366666 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
CAPN9-203ENST00000366666 RFC4P35249 363 aa15.24■□□□□ 0.03
CAPN9-203ENST00000366666 HSP90AB3PQ58FF7 597 aa15.24■□□□□ 0.03
CAPN9-203ENST00000366666 SMC5Q8IY18 1101 aa15.24■□□□□ 0.03
CAPN9-203ENST00000366666 ZPR1O75312 459 aa15.23■□□□□ 0.03
CAPN9-203ENST00000366666 FOXO4P98177 505 aa15.23■□□□□ 0.03
CAPN9-203ENST00000366666 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
CAPN9-203ENST00000366666 SRGAP3O43295 1099 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 NBR1Q14596 966 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 TRMT112Q9UI30 125 aaKnown RBP15.22■□□□□ 0.03
CAPN9-203ENST00000366666 CASZ1Q86V15 1759 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
CAPN9-203ENST00000366666 MYH3P11055 1940 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 PCCAP05165 728 aaPredicted RBP15.22■□□□□ 0.03
CAPN9-203ENST00000366666 CLEC4GQ6UXB4 293 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 NUTM1Q86Y26 1132 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 ZBTB38Q8NAP3 1195 aaPredicted RBP15.22■□□□□ 0.03
CAPN9-203ENST00000366666 SSH3Q8TE77 659 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 PDZRN3Q9UPQ7 1066 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 EXOC6BQ9Y2D4 811 aa15.22■□□□□ 0.03
CAPN9-203ENST00000366666 APBB1O00213 710 aa15.21■□□□□ 0.03
CAPN9-203ENST00000366666 SSFA2P28290 1259 aa15.21■□□□□ 0.03
CAPN9-203ENST00000366666 SF3B2Q13435 895 aaKnown RBP15.21■□□□□ 0.03
CAPN9-203ENST00000366666 POLA2Q14181 598 aa15.21■□□□□ 0.03
CAPN9-203ENST00000366666 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.03
CAPN9-203ENST00000366666 KLHDC4Q8TBB5 520 aa15.21■□□□□ 0.03
CAPN9-203ENST00000366666 DCTPP1Q9H773 170 aa15.21■□□□□ 0.03
CAPN9-203ENST00000366666 COL24A1Q17RW2 1714 aa15.21■□□□□ 0.03
CAPN9-203ENST00000366666 MTX1Q13505 466 aa15.21■□□□□ 0.02
CAPN9-203ENST00000366666 PA2G4Q9UQ80 394 aaKnown RBP15.21■□□□□ 0.02
CAPN9-203ENST00000366666 ZNF652Q9Y2D9 606 aa15.21■□□□□ 0.02
CAPN9-203ENST00000366666 NTSR2O95665 410 aa15.2■□□□□ 0.02
CAPN9-203ENST00000366666 GYS1P13807 737 aa15.2■□□□□ 0.02
CAPN9-203ENST00000366666 ADRA2BP18089 450 aa15.2■□□□□ 0.02
CAPN9-203ENST00000366666 BAG6P46379 1132 aa15.2■□□□□ 0.02
CAPN9-203ENST00000366666 LMBR1LQ6UX01 489 aa15.2■□□□□ 0.02
CAPN9-203ENST00000366666 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
CAPN9-203ENST00000366666 PNPLA7Q6ZV29 1317 aa15.2■□□□□ 0.02
CAPN9-203ENST00000366666 RABL6Q3YEC7 729 aaPredicted RBP15.19■□□□□ 0.02
CAPN9-203ENST00000366666 CCDC24Q8N4L8 307 aa15.19■□□□□ 0.02
CAPN9-203ENST00000366666 HCLS1P14317 486 aaPredicted RBP15.19■□□□□ 0.02
CAPN9-203ENST00000366666 IRS4O14654 1257 aaPredicted RBP15.18■□□□□ 0.02
CAPN9-203ENST00000366666 SMARCA5O60264 1052 aaPredicted RBP15.18■□□□□ 0.02
CAPN9-203ENST00000366666 HMMRO75330 724 aa15.18■□□□□ 0.02
CAPN9-203ENST00000366666 PDE4AP27815 886 aa15.18■□□□□ 0.02
CAPN9-203ENST00000366666 NFIXQ14938 502 aa15.18■□□□□ 0.02
CAPN9-203ENST00000366666 ANKRD45Q5TZF3 282 aa15.18■□□□□ 0.02
CAPN9-203ENST00000366666 UTP14AQ9BVJ6 771 aaKnown RBP15.18■□□□□ 0.02
CAPN9-203ENST00000366666 PDGFDQ9GZP0 370 aaPredicted RBP15.18■□□□□ 0.02
CAPN9-203ENST00000366666 RGS3P49796 1198 aa15.18■□□□□ 0.02
CAPN9-203ENST00000366666 LNPKQ9C0E8 428 aa15.18■□□□□ 0.02
CAPN9-203ENST00000366666 TAF1P21675 1872 aa15.18■□□□□ 0.02
CAPN9-203ENST00000366666 CDHR2Q9BYE9 1310 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 LAMB2P55268 1798 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 RFX5P48382 616 aaPredicted RBP15.17■□□□□ 0.02
CAPN9-203ENST00000366666 NUCB1Q02818 461 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 SLC15A2Q16348 729 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 ERFEQ4G0M1 354 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 PARP10Q53GL7 1025 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 SETDB2Q96T68 719 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 CHMP3Q9Y3E7 222 aa15.17■□□□□ 0.02
CAPN9-203ENST00000366666 SURF6O75683 361 aaKnown RBP15.17■□□□□ 0.02
CAPN9-203ENST00000366666 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.17■□□□□ 0.02
CAPN9-203ENST00000366666 SH3TC1Q8TE82 1336 aa15.16■□□□□ 0.02
CAPN9-203ENST00000366666 COL4A1P02462 1669 aa15.16■□□□□ 0.02
CAPN9-203ENST00000366666 ABCC12Q96J65 1359 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms