RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 ANKRD36CQ5JPF3 1778 aa30.68■■■□□ 2.5
SHC1-201ENST00000366442 CCDC93Q567U6 631 aa30.67■■■□□ 2.5
SHC1-201ENST00000366442 MRS2Q9HD23 443 aa30.67■■■□□ 2.5
SHC1-201ENST00000366442 RNF123Q5XPI4 1314 aa30.67■■■□□ 2.5
SHC1-201ENST00000366442 GLTPD2A6NH11 291 aa30.66■■■□□ 2.5
SHC1-201ENST00000366442 CCDC27Q2M243 656 aa30.66■■■□□ 2.5
SHC1-201ENST00000366442 UTP14AQ9BVJ6 771 aaKnown RBP30.66■■■□□ 2.5
SHC1-201ENST00000366442 HOXA10P31260 410 aaPredicted RBP30.65■■■□□ 2.5
SHC1-201ENST00000366442 TCIRG1Q13488 830 aa30.65■■■□□ 2.5
SHC1-201ENST00000366442 HYPKQ9NX55 129 aa30.65■■■□□ 2.5
SHC1-201ENST00000366442 NCBP3Q53F19 620 aaKnown RBP30.64■■■□□ 2.5
SHC1-201ENST00000366442 CEP350Q5VT06 3117 aa30.63■■■□□ 2.49
SHC1-201ENST00000366442 SLC10A5Q5PT55 438 aa30.63■■■□□ 2.49
SHC1-201ENST00000366442 PLBD2Q8NHP8 589 aa30.63■■■□□ 2.49
SHC1-201ENST00000366442 RPGRQ92834 1020 aaKnown RBP30.63■■■□□ 2.49
SHC1-201ENST00000366442 HSPA6P17066 643 aa30.62■■■□□ 2.49
SHC1-201ENST00000366442 NLRP10Q86W26 655 aa30.62■■■□□ 2.49
SHC1-201ENST00000366442 RTKN2Q8IZC4 609 aa30.62■■■□□ 2.49
SHC1-201ENST00000366442 RRAGCQ9HB90 399 aa30.62■■■□□ 2.49
SHC1-201ENST00000366442 ANKRD13DQ6ZTN6 518 aa30.61■■■□□ 2.49
SHC1-201ENST00000366442 C16orf71Q8IYS4 520 aaPredicted RBP30.61■■■□□ 2.49
SHC1-201ENST00000366442 RBM46Q8TBY0 533 aaKnown RBP30.61■■■□□ 2.49
SHC1-201ENST00000366442 FKBP4Q02790 459 aaKnown RBP eCLIP30.6■■■□□ 2.49
SHC1-201ENST00000366442 RBM17Q96I25 401 aaKnown RBP30.6■■■□□ 2.49
SHC1-201ENST00000366442 NLRP3Q96P20 1036 aa30.6■■■□□ 2.49
SHC1-201ENST00000366442 DPY19L2Q6NUT2 758 aa30.59■■■□□ 2.49
SHC1-201ENST00000366442 CRAMP1Q96RY5 1269 aa30.59■■■□□ 2.49
SHC1-201ENST00000366442 CHMP4AQ9BY43 222 aa30.59■■■□□ 2.49
SHC1-201ENST00000366442 CC2D2BQ6DHV5 1058 aa30.58■■■□□ 2.49
SHC1-201ENST00000366442 WWC1Q8IX03 1113 aa30.58■■■□□ 2.49
SHC1-201ENST00000366442 OLFM4Q6UX06 510 aa30.57■■■□□ 2.48
SHC1-201ENST00000366442 C3orf67Q6ZVT6 689 aa30.57■■■□□ 2.48
SHC1-201ENST00000366442 C8orf58Q8NAV2 365 aa30.57■■■□□ 2.48
SHC1-201ENST00000366442 SNED1Q8TER0 1413 aa30.56■■■□□ 2.48
SHC1-201ENST00000366442 ELL2O00472 640 aaPredicted RBP30.56■■■□□ 2.48
SHC1-201ENST00000366442 VEGFAP15692 232 aaPredicted RBP30.56■■■□□ 2.48
SHC1-201ENST00000366442 TRMT112Q9UI30 125 aaKnown RBP30.56■■■□□ 2.48
SHC1-201ENST00000366442 SH3TC1Q8TE82 1336 aa30.55■■■□□ 2.48
SHC1-201ENST00000366442 GRIPAP1Q4V328 841 aa30.55■■■□□ 2.48
SHC1-201ENST00000366442 ISCA1Q9BUE6 129 aa30.55■■■□□ 2.48
SHC1-201ENST00000366442 WDR90Q96KV7 1748 aa30.55■■■□□ 2.48
SHC1-201ENST00000366442 IL16Q14005 1332 aa30.54■■■□□ 2.48
SHC1-201ENST00000366442 PSMD1Q99460 953 aa30.54■■■□□ 2.48
SHC1-201ENST00000366442 FSTL1Q12841 308 aa30.53■■■□□ 2.48
SHC1-201ENST00000366442 CCDC30Q5VVM6 783 aa30.52■■■□□ 2.48
SHC1-201ENST00000366442 ZNF277Q9NRM2 450 aaPredicted RBP30.52■■■□□ 2.48
SHC1-201ENST00000366442 PPEF1O14829 653 aaPredicted RBP30.51■■■□□ 2.47
SHC1-201ENST00000366442 TRIM28Q13263 835 aaKnown RBP30.51■■■□□ 2.47
SHC1-201ENST00000366442 SYNE4Q8N205 404 aa30.51■■■□□ 2.47
SHC1-201ENST00000366442 HCLS1P14317 486 aaPredicted RBP30.5■■■□□ 2.47
SHC1-201ENST00000366442 GOLGA2Q08379 1002 aa30.5■■■□□ 2.47
SHC1-201ENST00000366442 TSR2Q969E8 191 aaKnown RBP30.5■■■□□ 2.47
SHC1-201ENST00000366442 LAMB2P55268 1798 aa30.5■■■□□ 2.47
SHC1-201ENST00000366442 TSPYL6Q8N831 410 aa30.49■■■□□ 2.47
SHC1-201ENST00000366442 PHAXQ9H814 394 aaKnown RBP30.49■■■□□ 2.47
SHC1-201ENST00000366442 POTECB2RU33 542 aa30.48■■■□□ 2.47
SHC1-201ENST00000366442 IARSP41252 1262 aaKnown RBP30.48■■■□□ 2.47
SHC1-201ENST00000366442 RIC3Q7Z5B4 369 aa30.48■■■□□ 2.47
SHC1-201ENST00000366442 ABCC4O15439 1325 aa30.47■■■□□ 2.47
SHC1-201ENST00000366442 ATP5J2-PTCD1G3V325 749 aa30.47■■■□□ 2.47
SHC1-201ENST00000366442 APLP1P51693 650 aa30.47■■■□□ 2.47
SHC1-201ENST00000366442 SMC1BQ8NDV3 1235 aa30.46■■■□□ 2.47
SHC1-201ENST00000366442 ATP6V0A2Q9Y487 856 aa30.46■■■□□ 2.47
SHC1-201ENST00000366442 BBOX1O75936 387 aa30.45■■■□□ 2.47
SHC1-201ENST00000366442 DDNO94850 711 aaPredicted RBP30.45■■■□□ 2.47
SHC1-201ENST00000366442 WDR63Q8IWG1 891 aa30.45■■■□□ 2.47
SHC1-201ENST00000366442 DDX60Q8IY21 1712 aaKnown RBP30.44■■■□□ 2.46
SHC1-201ENST00000366442 TMX4Q9H1E5 349 aaPredicted RBP30.44■■■□□ 2.46
SHC1-201ENST00000366442 FZD9O00144 591 aa30.43■■■□□ 2.46
SHC1-201ENST00000366442 DDX58O95786 925 aaKnown RBP30.43■■■□□ 2.46
SHC1-201ENST00000366442 DDX46Q7L014 1031 aaKnown RBP30.43■■■□□ 2.46
SHC1-201ENST00000366442 FAM89AQ96GI7 184 aa30.43■■■□□ 2.46
SHC1-201ENST00000366442 L3MBTL3Q96JM7 780 aaPredicted RBP30.43■■■□□ 2.46
SHC1-201ENST00000366442 TWISTNBQ3B726 338 aaPredicted RBP30.42■■■□□ 2.46
SHC1-201ENST00000366442 TCERG1O14776 1098 aaKnown RBP30.41■■■□□ 2.46
SHC1-201ENST00000366442 GRAPQ13588 217 aa30.41■■■□□ 2.46
SHC1-201ENST00000366442 GRAPLQ8TC17 118 aaPredicted RBP30.41■■■□□ 2.46
SHC1-201ENST00000366442 JDP2Q8WYK2 163 aa30.41■■■□□ 2.46
SHC1-201ENST00000366442 STK31Q9BXU1 1019 aa30.41■■■□□ 2.46
SHC1-201ENST00000366442 SF3B3Q15393 1217 aaKnown RBP30.4■■■□□ 2.46
SHC1-201ENST00000366442 SP8Q8IXZ3 490 aa30.4■■■□□ 2.46
SHC1-201ENST00000366442 ZNF428Q96B54 188 aa30.4■■■□□ 2.46
SHC1-201ENST00000366442 ZNF541Q9H0D2 1346 aa30.4■■■□□ 2.46
SHC1-201ENST00000366442 SCN4AP35499 1836 aa30.39■■■□□ 2.46
SHC1-201ENST00000366442 IQCA1LA6NCM1 817 aa30.39■■■□□ 2.46
SHC1-201ENST00000366442 TMC4Q7Z404 712 aa30.39■■■□□ 2.46
SHC1-201ENST00000366442 SLC51AQ86UW1 340 aa30.39■■■□□ 2.46
SHC1-201ENST00000366442 FAM9BQ8IZU0 186 aa30.39■■■□□ 2.46
SHC1-201ENST00000366442 ZBTB38Q8NAP3 1195 aaPredicted RBP30.39■■■□□ 2.46
SHC1-201ENST00000366442 CCDC191Q8NCU4 936 aa30.39■■■□□ 2.46
SHC1-201ENST00000366442 MYD88Q99836 296 aa30.39■■■□□ 2.46
SHC1-201ENST00000366442 METTL22Q9BUU2 404 aaPredicted RBP30.39■■■□□ 2.46
SHC1-201ENST00000366442 FANCIQ9NVI1 1328 aa30.39■■■□□ 2.46
SHC1-201ENST00000366442 VPS33BQ9H267 617 aa30.38■■■□□ 2.45
SHC1-201ENST00000366442 IRS4O14654 1257 aaPredicted RBP30.37■■■□□ 2.45
SHC1-201ENST00000366442 HSP90B1P14625 803 aaKnown RBP30.37■■■□□ 2.45
SHC1-201ENST00000366442 RTFDC1Q9BY42 306 aaPredicted RBP30.37■■■□□ 2.45
SHC1-201ENST00000366442 SALL2Q9Y467 1007 aaPredicted RBP30.37■■■□□ 2.45
SHC1-201ENST00000366442 KSR2Q6VAB6 950 aa30.36■■■□□ 2.45
SHC1-201ENST00000366442 LARGE2Q8N3Y3 721 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms