RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 SPATA31D1Q6ZQQ2 1576 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 SMTNL1A8MU46 457 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 NEBLO76041 1014 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 ECM2O94769 699 aaPredicted RBP10.67□□□□□ -0.7
CALD1-201ENST00000361675 NEXNQ0ZGT2 675 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 BRMS1Q9HCU9 246 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 ANAPC4Q9UJX5 808 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 LONRF3Q496Y0 759 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 MICALL1Q8N3F8 863 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 TRIM5Q9C035 493 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 SETD1AO15047 1707 aaKnown RBP10.67□□□□□ -0.7
CALD1-201ENST00000361675 NRXN3Q9Y4C0 1643 aa10.67□□□□□ -0.7
CALD1-201ENST00000361675 RLBP1P12271 317 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 LRMPQ12912 555 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 MTA1Q13330 715 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 TSR2Q969E8 191 aaKnown RBP10.66□□□□□ -0.7
CALD1-201ENST00000361675 PLEKHF1Q96S99 279 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 IQSEC3Q9UPP2 1182 aaPredicted RBP10.66□□□□□ -0.7
CALD1-201ENST00000361675 IPO7O95373 1038 aaKnown RBP10.66□□□□□ -0.7
CALD1-201ENST00000361675 TMCO3Q6UWJ1 677 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 CCDC186Q7Z3E2 898 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 SYTL4Q96C24 671 aaPredicted RBP10.66□□□□□ -0.7
CALD1-201ENST00000361675 SPOCK3Q9BQ16 436 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 INF2Q27J81 1249 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 HDGFL1Q5TGJ6 251 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 CEP135Q66GS9 1140 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 MNS1Q8NEH6 495 aa10.66□□□□□ -0.7
CALD1-201ENST00000361675 REREQ9P2R6 1566 aa10.65□□□□□ -0.7
CALD1-201ENST00000361675 ANKRD45Q5TZF3 282 aa10.65□□□□□ -0.7
CALD1-201ENST00000361675 ARGLU1Q9NWB6 273 aaPredicted RBP10.65□□□□□ -0.7
CALD1-201ENST00000361675 SUGT1Q9Y2Z0 365 aa10.65□□□□□ -0.7
CALD1-201ENST00000361675 COL3A1P02461 1466 aaPredicted RBP10.65□□□□□ -0.7
CALD1-201ENST00000361675 TTC19Q6DKK2 380 aaPredicted RBP10.65□□□□□ -0.7
CALD1-201ENST00000361675 C16orf87Q6PH81 154 aa10.65□□□□□ -0.7
CALD1-201ENST00000361675 RETREG2Q8NC44 543 aa10.65□□□□□ -0.7
CALD1-201ENST00000361675 ST5P78524 1137 aa10.65□□□□□ -0.71
CALD1-201ENST00000361675 E2F5Q15329 346 aa10.65□□□□□ -0.71
CALD1-201ENST00000361675 KIAA1524Q8TCG1 905 aa10.65□□□□□ -0.71
CALD1-201ENST00000361675 NUTM2FA1L443 756 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 CAND2O75155 1236 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 TRIM35Q9UPQ4 493 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 RPS6KL1Q9Y6S9 549 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 ST18O60284 1047 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 RARSP54136 660 aaKnown RBP10.64□□□□□ -0.71
CALD1-201ENST00000361675 SNX21Q969T3 373 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 PUF60Q9UHX1 559 aaKnown RBP10.64□□□□□ -0.71
CALD1-201ENST00000361675 LTKP29376 864 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 PTPN14Q15678 1187 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 NME9Q86XW9 330 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 WWC3Q9ULE0 1092 aa10.64□□□□□ -0.71
CALD1-201ENST00000361675 TMCO5BA8MYB1 307 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 PDE3AQ14432 1141 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 HOMER1Q86YM7 354 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 SMARCE1Q969G3 411 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 PDRG1Q9NUG6 133 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 DONSONQ9NYP3 566 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 CREB3O43889 395 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 PAX7P23759 505 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
CALD1-201ENST00000361675 ERCC6LQ2NKX8 1250 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 GIMAP6Q6P9H5 292 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 ATAD2Q6PL18 1390 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 IBTKQ9P2D0 1353 aaPredicted RBP10.63□□□□□ -0.71
CALD1-201ENST00000361675 RGL2O15211 777 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 FIBPO43427 364 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 REC8O95072 547 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 FAM184AQ8NB25 1140 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 CFAP53Q96M91 514 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 SMC3Q9UQE7 1217 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 EMILIN1Q9Y6C2 1016 aa10.63□□□□□ -0.71
CALD1-201ENST00000361675 SMAPO00193 183 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 ATP2B1P20020 1258 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.62□□□□□ -0.71
CALD1-201ENST00000361675 CCP110O43303 1012 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 ARHGAP29Q52LW3 1261 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 FILIP1Q7Z7B0 1213 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 PLEKHA4Q9H4M7 779 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 PRR36Q9H6K5 1346 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 NSD2O96028 1365 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 TTC30AQ86WT1 665 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 METTL14Q9HCE5 456 aaKnown RBP10.62□□□□□ -0.71
CALD1-201ENST00000361675 PAXBP1Q9Y5B6 917 aa10.62□□□□□ -0.71
CALD1-201ENST00000361675 CTIFO43310 598 aaKnown RBP10.61□□□□□ -0.71
CALD1-201ENST00000361675 RDXP35241 583 aaKnown RBP10.61□□□□□ -0.71
CALD1-201ENST00000361675 TMPOP42166 694 aaKnown RBP10.61□□□□□ -0.71
CALD1-201ENST00000361675 KCNA1Q09470 495 aa10.61□□□□□ -0.71
CALD1-201ENST00000361675 ZRSR1Q15695 479 aaKnown RBP10.61□□□□□ -0.71
CALD1-201ENST00000361675 PACS2Q86VP3 889 aa10.61□□□□□ -0.71
CALD1-201ENST00000361675 UBXN4Q92575 508 aa10.61□□□□□ -0.71
CALD1-201ENST00000361675 PHACTR3Q96KR7 559 aa10.61□□□□□ -0.71
CALD1-201ENST00000361675 WASLO00401 505 aaPredicted RBP10.61□□□□□ -0.71
CALD1-201ENST00000361675 CA8P35219 290 aa10.61□□□□□ -0.71
CALD1-201ENST00000361675 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
CALD1-201ENST00000361675 SF3B2Q13435 895 aaKnown RBP10.61□□□□□ -0.71
CALD1-201ENST00000361675 HSP90AB2PQ58FF8 381 aa10.61□□□□□ -0.71
CALD1-201ENST00000361675 LRRC27Q9C0I9 530 aa10.61□□□□□ -0.71
CALD1-201ENST00000361675 FRMD3A2A2Y4 597 aa10.6□□□□□ -0.71
CALD1-201ENST00000361675 PPFIA4O75335 1185 aa10.6□□□□□ -0.71
CALD1-201ENST00000361675 ECEL1O95672 775 aa10.6□□□□□ -0.71
CALD1-201ENST00000361675 HMOX1P09601 288 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms