RNA–Protein interactions for RNA: ENST00000360835.8

SCUBE1-202, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-202ENST00000360835 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 KIF5BP33176 963 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 CCDC91Q7Z6B0 441 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 MPHOSPH10O00566 681 aaKnown RBP16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 MATR3P43243 847 aaKnown RBP eCLIP16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 TMEM67Q5HYA8 995 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 ORC3Q9UBD5 711 aaPredicted RBP16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 CTR9Q6PD62 1173 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 USP48Q86UV5 1035 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 KCNG4Q8TDN1 519 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 ADGBQ8N7X0 1667 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 SSR1P43307 286 aaKnown RBP16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 AMPD3Q01432 767 aa16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
SCUBE1-202ENST00000360835 RHPN1Q8TCX5 695 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 MAP2K1Q02750 393 aaPredicted RBP16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 ANO6Q4KMQ2 910 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 GIMAP7Q8NHV1 300 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 MYZAPP0CAP1 466 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 NLRP5P59047 1200 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 KRT222Q8N1A0 295 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 NOLC1Q14978 699 aaKnown RBP eCLIP16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 CPLX3Q8WVH0 158 aa16.87■□□□□ 0.29
SCUBE1-202ENST00000360835 ZFYVE9O95405 1425 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 MTIF2P46199 727 aaKnown RBP16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 SYKP43405 635 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 IDI1Q13907 227 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 PHF8Q9UPP1 1060 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 MFSD6Q6ZSS7 791 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 TUBB4AP04350 444 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 UBE3BQ7Z3V4 1068 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 CCDC82Q8N4S0 544 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 TDRD12Q587J7 1177 aaKnown RBP16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 TRMT112Q9UI30 125 aaKnown RBP16.86■□□□□ 0.29
SCUBE1-202ENST00000360835 CTAGE1Q96RT6 745 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 MRPL50Q8N5N7 158 aaKnown RBP16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 ZKSCAN5Q9Y2L8 839 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 DENND4BO75064 1496 aaPredicted RBP16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 BICDL1Q6ZP65 573 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 CALML4Q96GE6 196 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 F13A1P00488 732 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 ANKIB1Q9P2G1 1089 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 RMND1Q9NWS8 449 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 GNG11P61952 73 aa16.85■□□□□ 0.29
SCUBE1-202ENST00000360835 SLF2Q8IX21 1173 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 CCDC113Q9H0I3 377 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 TAOK3Q9H2K8 898 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 TMOD2Q9NZR1 351 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 GTF2F1P35269 517 aaKnown RBP eCLIP16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 MEIS3Q99687 375 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 BMP15O95972 392 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 SKILP12757 684 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 TRIM21P19474 475 aaKnown RBP16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 ZNF444Q8N0Y2 327 aaPredicted RBP16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 SMC1AQ14683 1233 aaKnown RBP16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 TMX1Q9H3N1 280 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 GOPCQ9HD26 462 aa16.84■□□□□ 0.29
SCUBE1-202ENST00000360835 ZPR1O75312 459 aa16.83■□□□□ 0.29
SCUBE1-202ENST00000360835 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.29
SCUBE1-202ENST00000360835 GCC2Q8IWJ2 1684 aa16.83■□□□□ 0.29
SCUBE1-202ENST00000360835 MRPS27Q92552 414 aaKnown RBP16.83■□□□□ 0.29
SCUBE1-202ENST00000360835 UBA5Q9GZZ9 404 aa16.83■□□□□ 0.29
SCUBE1-202ENST00000360835 UBASH3AP57075 661 aa16.83■□□□□ 0.28
SCUBE1-202ENST00000360835 WDR62O43379 1518 aa16.83■□□□□ 0.28
SCUBE1-202ENST00000360835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCUBE1-202ENST00000360835 KIAA0556O60303 1618 aa16.83■□□□□ 0.28
SCUBE1-202ENST00000360835 KDM5AP29375 1690 aaKnown RBP16.83■□□□□ 0.28
SCUBE1-202ENST00000360835 TTC41PQ6P2S7 1318 aa16.83■□□□□ 0.28
SCUBE1-202ENST00000360835 ZFYP08048 801 aaPredicted RBP16.83■□□□□ 0.28
SCUBE1-202ENST00000360835 PANK2Q9BZ23 570 aa16.83■□□□□ 0.28
SCUBE1-202ENST00000360835 COL17A1Q9UMD9 1497 aaPredicted RBP16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 CUL5Q93034 780 aa16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 AMOTL2Q9Y2J4 779 aa16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 PDE4BQ07343 736 aa16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 SLC26A6Q9BXS9 759 aa16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 CKAP4Q07065 602 aaKnown RBP16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 SPDYE4A6NLX3 237 aa16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 JADE2Q9NQC1 790 aa16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
SCUBE1-202ENST00000360835 SRRTQ9BXP5 876 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms