RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 SRGAP3O43295 1099 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 EZH2Q15910 746 aaKnown RBP20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 CLEC4GQ6UXB4 293 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 BICDL1Q6ZP65 573 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 PPP1R42Q7Z4L9 355 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 GCC1Q96CN9 775 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 TRMT112Q9UI30 125 aaKnown RBP20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 ANKRD36CQ5JPF3 1778 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 SSFA2P28290 1259 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 PARP10Q53GL7 1025 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 ZNF34Q8IZ26 560 aa20.68■□□□□ 0.9
SDCBP2-202ENST00000360779 NUP98P52948 1817 aa20.67■□□□□ 0.9
SDCBP2-202ENST00000360779 BCORQ6W2J9 1755 aa20.67■□□□□ 0.9
SDCBP2-202ENST00000360779 PNMA6EA0A0J9YXQ4 647 aa20.67■□□□□ 0.9
SDCBP2-202ENST00000360779 PCCAP05165 728 aaPredicted RBP20.67■□□□□ 0.9
SDCBP2-202ENST00000360779 AMIGO3Q86WK7 504 aa20.67■□□□□ 0.9
SDCBP2-202ENST00000360779 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
SDCBP2-202ENST00000360779 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
SDCBP2-202ENST00000360779 SCN7AQ01118 1682 aa20.66■□□□□ 0.9
SDCBP2-202ENST00000360779 APBB1O00213 710 aa20.66■□□□□ 0.9
SDCBP2-202ENST00000360779 ZBTB38Q8NAP3 1195 aaPredicted RBP20.66■□□□□ 0.9
SDCBP2-202ENST00000360779 UTP14AQ9BVJ6 771 aaKnown RBP20.66■□□□□ 0.9
SDCBP2-202ENST00000360779 RGPD3A6NKT7 1758 aaPredicted RBP20.66■□□□□ 0.9
SDCBP2-202ENST00000360779 RGPD4Q7Z3J3 1758 aa20.66■□□□□ 0.9
SDCBP2-202ENST00000360779 EP400Q96L91 3159 aa20.65■□□□□ 0.9
SDCBP2-202ENST00000360779 UBN2Q6ZU65 1347 aa20.65■□□□□ 0.9
SDCBP2-202ENST00000360779 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
SDCBP2-202ENST00000360779 USP42Q9H9J4 1324 aaKnown RBP20.64■□□□□ 0.9
SDCBP2-202ENST00000360779 ANKRD45Q5TZF3 282 aa20.64■□□□□ 0.9
SDCBP2-202ENST00000360779 PDZRN3Q9UPQ7 1066 aa20.64■□□□□ 0.9
SDCBP2-202ENST00000360779 NPHP1O15259 732 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 CASP7P55210 303 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 OS9Q13438 667 aaPredicted RBP20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 TBC1D9BQ66K14 1250 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 SMC5Q8IY18 1101 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 CAMKK2Q96RR4 588 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 SETDB2Q96T68 719 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 STK32BQ9NY57 414 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 RGL2O15211 777 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 GTF2E1P29083 439 aaPredicted RBP20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 RGS3P49796 1198 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 EPHA10Q5JZY3 1008 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 DEFB132Q7Z7B7 95 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 SSH3Q8TE77 659 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 DCTPP1Q9H773 170 aa20.63■□□□□ 0.89
SDCBP2-202ENST00000360779 SH3TC1Q8TE82 1336 aa20.62■□□□□ 0.89
SDCBP2-202ENST00000360779 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
SDCBP2-202ENST00000360779 IRS4O14654 1257 aaPredicted RBP20.62■□□□□ 0.89
SDCBP2-202ENST00000360779 LMBR1LQ6UX01 489 aa20.62■□□□□ 0.89
SDCBP2-202ENST00000360779 AKT1S1Q96B36 256 aa20.62■□□□□ 0.89
SDCBP2-202ENST00000360779 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
SDCBP2-202ENST00000360779 EXOC6BQ9Y2D4 811 aa20.62■□□□□ 0.89
SDCBP2-202ENST00000360779 C4AP0C0L4 1744 aa20.62■□□□□ 0.89
SDCBP2-202ENST00000360779 UBR3Q6ZT12 1888 aa20.61■□□□□ 0.89
SDCBP2-202ENST00000360779 SURF6O75683 361 aaKnown RBP20.61■□□□□ 0.89
SDCBP2-202ENST00000360779 MTX1Q13505 466 aa20.61■□□□□ 0.89
SDCBP2-202ENST00000360779 SKAP1Q86WV1 359 aa20.61■□□□□ 0.89
SDCBP2-202ENST00000360779 FLAD1Q8NFF5 587 aa20.61■□□□□ 0.89
SDCBP2-202ENST00000360779 BCL2L12Q9HB09 334 aa20.61■□□□□ 0.89
SDCBP2-202ENST00000360779 HSP90B1P14625 803 aaKnown RBP20.6■□□□□ 0.89
SDCBP2-202ENST00000360779 POLA2Q14181 598 aa20.6■□□□□ 0.89
SDCBP2-202ENST00000360779 CCDC125Q86Z20 511 aa20.6■□□□□ 0.89
SDCBP2-202ENST00000360779 NBPF5PQ86XG9 351 aaPredicted RBP20.59■□□□□ 0.89
SDCBP2-202ENST00000360779 SYNE4Q8N205 404 aa20.59■□□□□ 0.89
SDCBP2-202ENST00000360779 LNPKQ9C0E8 428 aa20.59■□□□□ 0.89
SDCBP2-202ENST00000360779 NYXQ9GZU5 481 aa20.59■□□□□ 0.89
SDCBP2-202ENST00000360779 NTSR2O95665 410 aa20.58■□□□□ 0.89
SDCBP2-202ENST00000360779 FOXO4P98177 505 aa20.58■□□□□ 0.89
SDCBP2-202ENST00000360779 NUCB1Q02818 461 aa20.58■□□□□ 0.89
SDCBP2-202ENST00000360779 HSP90AB4PQ58FF6 505 aa20.58■□□□□ 0.89
SDCBP2-202ENST00000360779 CHD1LQ86WJ1 897 aa20.58■□□□□ 0.89
SDCBP2-202ENST00000360779 NUTM1Q86Y26 1132 aa20.58■□□□□ 0.89
SDCBP2-202ENST00000360779 CCDC85AQ96PX6 553 aaPredicted RBP20.58■□□□□ 0.89
SDCBP2-202ENST00000360779 PDE8AO60658 829 aa20.58■□□□□ 0.88
SDCBP2-202ENST00000360779 RABL6Q3YEC7 729 aaPredicted RBP20.58■□□□□ 0.88
SDCBP2-202ENST00000360779 HCLS1P14317 486 aaPredicted RBP20.57■□□□□ 0.88
SDCBP2-202ENST00000360779 G3BP1Q13283 466 aaKnown RBP eCLIP20.57■□□□□ 0.88
SDCBP2-202ENST00000360779 TAF7LQ5H9L4 462 aa20.57■□□□□ 0.88
SDCBP2-202ENST00000360779 PLA2G12BQ9BX93 195 aa20.57■□□□□ 0.88
SDCBP2-202ENST00000360779 SIL1Q9H173 461 aa20.57■□□□□ 0.88
SDCBP2-202ENST00000360779 PA2G4Q9UQ80 394 aaKnown RBP20.57■□□□□ 0.88
SDCBP2-202ENST00000360779 GYS1P13807 737 aa20.56■□□□□ 0.88
SDCBP2-202ENST00000360779 CTSWP56202 376 aa20.56■□□□□ 0.88
SDCBP2-202ENST00000360779 SLC15A2Q16348 729 aa20.56■□□□□ 0.88
SDCBP2-202ENST00000360779 CCDC57Q2TAC2 916 aa20.56■□□□□ 0.88
SDCBP2-202ENST00000360779 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
SDCBP2-202ENST00000360779 CARMIL3Q8ND23 1372 aa20.55■□□□□ 0.88
SDCBP2-202ENST00000360779 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
SDCBP2-202ENST00000360779 ERFEQ4G0M1 354 aa20.55■□□□□ 0.88
SDCBP2-202ENST00000360779 TPTE2Q6XPS3 522 aa20.55■□□□□ 0.88
SDCBP2-202ENST00000360779 LRRCC1Q9C099 1032 aa20.55■□□□□ 0.88
SDCBP2-202ENST00000360779 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
SDCBP2-202ENST00000360779 SMARCA5O60264 1052 aaPredicted RBP20.54■□□□□ 0.88
SDCBP2-202ENST00000360779 NFIXQ14938 502 aa20.54■□□□□ 0.88
SDCBP2-202ENST00000360779 FAM161AQ3B820 660 aa20.53■□□□□ 0.88
SDCBP2-202ENST00000360779 ERC1Q8IUD2 1116 aa20.53■□□□□ 0.88
SDCBP2-202ENST00000360779 KLHDC4Q8TBB5 520 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms