RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 USP44Q9H0E7 712 aa14.03□□□□□ -0.16
EPHB4-202ENST00000360620 HOOK1Q9UJC3 728 aaKnown RBP14.03□□□□□ -0.16
EPHB4-202ENST00000360620 LRMPQ12912 555 aa14.02□□□□□ -0.16
EPHB4-202ENST00000360620 TMCO3Q6UWJ1 677 aa14.02□□□□□ -0.16
EPHB4-202ENST00000360620 NFXL1Q6ZNB6 911 aa14.02□□□□□ -0.16
EPHB4-202ENST00000360620 MTMR6Q9Y217 621 aa14.02□□□□□ -0.16
EPHB4-202ENST00000360620 KIF20AO95235 890 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 GSDMDP57764 484 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 SNW1Q13573 536 aaKnown RBP14.02□□□□□ -0.17
EPHB4-202ENST00000360620 CFAP100Q494V2 611 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 CDC37L1Q7L3B6 337 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 JARID2Q92833 1246 aaPredicted RBP14.02□□□□□ -0.17
EPHB4-202ENST00000360620 HMG20BQ9P0W2 317 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 PES1O00541 588 aaKnown RBP14.02□□□□□ -0.17
EPHB4-202ENST00000360620 TPM1P09493 284 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 NBPF7P0C2Y1 421 aaPredicted RBP14.02□□□□□ -0.17
EPHB4-202ENST00000360620 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.17
EPHB4-202ENST00000360620 LARP1Q6PKG0 1096 aaKnown RBP14.02□□□□□ -0.17
EPHB4-202ENST00000360620 TMC6Q7Z403 805 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 ZSCAN16Q9H4T2 348 aaPredicted RBP14.02□□□□□ -0.17
EPHB4-202ENST00000360620 OGFRQ9NZT2 677 aa14.02□□□□□ -0.17
EPHB4-202ENST00000360620 EPB41L2O43491 1005 aaKnown RBP14.01□□□□□ -0.17
EPHB4-202ENST00000360620 URI1O94763 535 aaPredicted RBP14.01□□□□□ -0.17
EPHB4-202ENST00000360620 LIG1P18858 919 aa14.01□□□□□ -0.17
EPHB4-202ENST00000360620 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
EPHB4-202ENST00000360620 CCDC69A6NI79 296 aa14.01□□□□□ -0.17
EPHB4-202ENST00000360620 NLRP2Q9NX02 1062 aa14.01□□□□□ -0.17
EPHB4-202ENST00000360620 STAP2Q9UGK3 403 aa14.01□□□□□ -0.17
EPHB4-202ENST00000360620 U3KPZ7 1027 aaPredicted RBP14.01□□□□□ -0.17
EPHB4-202ENST00000360620 FLT4P35916 1363 aa14.01□□□□□ -0.17
EPHB4-202ENST00000360620 MED14O60244 1454 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 KIDINS220Q9ULH0 1771 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 TTC6Q86TZ1 520 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 KIAA1524Q8TCG1 905 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 TRERF1Q96PN7 1200 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 PNPLA6Q8IY17 1366 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 ATP2B1P20020 1258 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 ZNF75DP51815 510 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 ME3Q16798 604 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 SSH3Q8TE77 659 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 AOPEPQ8N6M6 819 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 JMYQ8N9B5 988 aa14□□□□□ -0.17
EPHB4-202ENST00000360620 ARAP3Q8WWN8 1544 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 MROH2AA6NES4 1674 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 CFAP74Q9C0B2 1584 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 METP08581 1390 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 FAM227BQ96M60 508 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 LRRC7Q96NW7 1537 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 QRICH2Q9H0J4 1663 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 POLR3GO15318 223 aaPredicted RBP13.99□□□□□ -0.17
EPHB4-202ENST00000360620 SAFBQ15424 915 aaKnown RBP eCLIP13.99□□□□□ -0.17
EPHB4-202ENST00000360620 SLU7O95391 586 aaKnown RBP13.99□□□□□ -0.17
EPHB4-202ENST00000360620 PTH1RQ03431 593 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 CWF19L2Q2TBE0 894 aaKnown RBP13.99□□□□□ -0.17
EPHB4-202ENST00000360620 LEO1Q8WVC0 666 aaPredicted RBP13.99□□□□□ -0.17
EPHB4-202ENST00000360620 MYOM1P52179 1685 aa13.99□□□□□ -0.17
EPHB4-202ENST00000360620 HSP90B2PQ58FF3 399 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 TTLL5Q6EMB2 1281 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 Q6ZUG5 572 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 ZNF397Q8NF99 534 aaPredicted RBP13.98□□□□□ -0.17
EPHB4-202ENST00000360620 AK9Q5TCS8 1911 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 CBFA2T2O43439 604 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 SLC3A2P08195 630 aaKnown RBP13.98□□□□□ -0.17
EPHB4-202ENST00000360620 RASSF8Q8NHQ8 419 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 C8orf76Q96K31 380 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 USP16Q9Y5T5 823 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 HMGB1P09429 215 aaKnown RBP13.98□□□□□ -0.17
EPHB4-202ENST00000360620 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.17
EPHB4-202ENST00000360620 DMTNQ08495 405 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 BMS1Q14692 1282 aaKnown RBP13.98□□□□□ -0.17
EPHB4-202ENST00000360620 ISM2Q6H9L7 571 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 CLSTN2Q9H4D0 955 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 HYPKQ9NX55 129 aa13.98□□□□□ -0.17
EPHB4-202ENST00000360620 ADCK5Q3MIX3 580 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 STK11IPQ8N1F8 1099 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 MYD88Q99836 296 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 TULP4Q9NRJ4 1543 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 AATKQ6ZMQ8 1374 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 TNRQ92752 1358 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 SLC27A2O14975 620 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 POLR3DP05423 398 aaPredicted RBP13.97□□□□□ -0.17
EPHB4-202ENST00000360620 AKAP17AQ02040 695 aaKnown RBP13.97□□□□□ -0.17
EPHB4-202ENST00000360620 DDX46Q7L014 1031 aaKnown RBP13.97□□□□□ -0.17
EPHB4-202ENST00000360620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.97□□□□□ -0.17
EPHB4-202ENST00000360620 LSG1Q9H089 658 aaKnown RBP13.97□□□□□ -0.17
EPHB4-202ENST00000360620 CALCOCO1Q9P1Z2 691 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 PPRC1Q5VV67 1664 aaKnown RBP13.97□□□□□ -0.17
EPHB4-202ENST00000360620 MLH3Q9UHC1 1453 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 GRM8O00222 908 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 ZSCAN25Q6NSZ9 544 aa13.97□□□□□ -0.17
EPHB4-202ENST00000360620 NOL10Q9BSC4 688 aaKnown RBP13.97□□□□□ -0.17
EPHB4-202ENST00000360620 TM6SF1Q9BZW5 370 aa13.96□□□□□ -0.17
EPHB4-202ENST00000360620 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.17
EPHB4-202ENST00000360620 TTC21AQ8NDW8 1320 aa13.96□□□□□ -0.17
EPHB4-202ENST00000360620 GLI2P10070 1586 aa13.96□□□□□ -0.17
EPHB4-202ENST00000360620 ALDH1L1O75891 902 aa13.96□□□□□ -0.17
EPHB4-202ENST00000360620 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.17
EPHB4-202ENST00000360620 ABCC3O15438 1527 aa13.96□□□□□ -0.17
EPHB4-202ENST00000360620 SETBP1Q9Y6X0 1596 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms