RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CTCFLQ8NI51 663 aaPredicted RBP15.36■□□□□ 0.05
CCDC144A-203ENST00000360495 RHOXF2BP0C7M4 288 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 RAB3GAP1Q15042 981 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 TMEM266Q2M3C6 531 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 HDXQ7Z353 690 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 SELENOSQ9BQE4 189 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 RHOXF2Q9BQY4 288 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 TYRO3Q06418 890 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 NAPBQ9H115 298 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 USP16Q9Y5T5 823 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 ARFGAP2Q8N6H7 521 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 ORC3Q9UBD5 711 aaPredicted RBP15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 IKBKGQ9Y6K9 419 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 ZNF213O14771 459 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 C8orf34Q49A92 452 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 TCERG1LQ5VWI1 586 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 ERO1AQ96HE7 468 aa15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 CCDC8Q9H0W5 538 aaPredicted RBP15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 STMN4Q9H169 189 aaPredicted RBP15.35■□□□□ 0.05
CCDC144A-203ENST00000360495 CCDC194A0A1B0GVG4 234 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 IFIT1P09914 478 aaKnown RBP15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 CCDC97Q96F63 343 aaPredicted RBP15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 TRIM47Q96LD4 638 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 TTC14Q96N46 770 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 TACC1O75410 805 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 TATP17735 454 aaPredicted RBP15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 SPTY2D1Q68D10 685 aaPredicted RBP15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 BTBD11A6QL63 1104 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 MINDY4BA8MYZ0 360 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 CABP4P57796 275 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 NAP1L3Q99457 506 aaPredicted RBP15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 CDK19Q9BWU1 502 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 NLRP5P59047 1200 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 EVI5LQ96CN4 794 aa15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 PYM1Q9BRP8 204 aaKnown RBP15.34■□□□□ 0.05
CCDC144A-203ENST00000360495 AMPD3Q01432 767 aa15.33■□□□□ 0.05
CCDC144A-203ENST00000360495 DDX12PQ92771 950 aa15.33■□□□□ 0.05
CCDC144A-203ENST00000360495 MIS18AQ9NYP9 233 aa15.33■□□□□ 0.05
CCDC144A-203ENST00000360495 ABCC11Q96J66 1382 aa15.33■□□□□ 0.05
CCDC144A-203ENST00000360495 IDEP14735 1019 aa15.33■□□□□ 0.05
CCDC144A-203ENST00000360495 PPFIA3O75145 1194 aa15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 KARSQ15046 597 aaKnown RBP15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 TUBBP07437 444 aa15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 IARSP41252 1262 aaKnown RBP15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 NECAB1Q8N987 351 aa15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 CAPZA3Q96KX2 299 aa15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 SMC6Q96SB8 1091 aa15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 IFIT3O14879 490 aaKnown RBP15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 F13A1P00488 732 aa15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 CLNS1AP54105 237 aaKnown RBP15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 SELENOOQ9BVL4 669 aa15.33■□□□□ 0.04
CCDC144A-203ENST00000360495 NSD3Q9BZ95 1437 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 FERP16591 822 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 RRS1Q15050 365 aaKnown RBP15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 NEK1Q96PY6 1258 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 EVCP57679 992 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 DNM1Q05193 864 aaKnown RBP15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 ZBTB16Q05516 673 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 CETN1Q12798 172 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 PUS7Q96PZ0 661 aaKnown RBP15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 ABCF2Q9UG63 623 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 RASAL2Q9UJF2 1139 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 AKAP2Q9Y2D5 859 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 F6X3S4 739 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 SAMD15Q9P1V8 674 aa15.32■□□□□ 0.04
CCDC144A-203ENST00000360495 LMOD1P29536 600 aaPredicted RBP15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 RRAGBQ5VZM2 374 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 TCP11L1Q9NUJ3 509 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 PPP2R3AQ06190 1150 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 SPAG1Q07617 926 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 CCDC77Q9BR77 488 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 IQCGQ9H095 443 aaKnown RBP15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 STIM2Q9P246 746 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 CASKIN1Q8WXD9 1431 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 NUCB1Q02818 461 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 METTL24Q5JXM2 366 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 ZNF569Q5MCW4 686 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 MCM10Q7L590 875 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 MYRIPQ8NFW9 859 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 AFAP1L1Q8TED9 768 aa15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 ZNF692Q9BU19 519 aaPredicted RBP15.31■□□□□ 0.04
CCDC144A-203ENST00000360495 B4GALNT4Q76KP1 1039 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 RMND1Q9NWS8 449 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 KRT86O43790 486 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 TSHZ3Q63HK5 1081 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 HMG20BQ9P0W2 317 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 PRC1O43663 620 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 UBA7P41226 1012 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 KRT83P78385 493 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 INPP5BP32019 993 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms