RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PPP1R14CQ8TAE6 165 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 CCDC102BQ68D86 513 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 NUTM1Q86Y26 1132 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 IMPG2Q9BZV3 1241 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 CCDC85AQ96PX6 553 aaPredicted RBP11.08□□□□□ -0.64
CUX1-203ENST00000360264 SYCE3A1L190 88 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 KIAA1524Q8TCG1 905 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 EXOC1Q9NV70 894 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 MAP1BP46821 2468 aaKnown RBP11.08□□□□□ -0.64
CUX1-203ENST00000360264 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 HLTFQ14527 1009 aaKnown RBP eCLIP11.08□□□□□ -0.64
CUX1-203ENST00000360264 CCDC14Q49A88 953 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 STX6O43752 255 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 LMBR1Q8WVP7 490 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 CRNKL1Q9BZJ0 848 aaKnown RBP11.08□□□□□ -0.64
CUX1-203ENST00000360264 KIF14Q15058 1648 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 KRT13P13646 458 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 PDE4DIPQ5VU43 2346 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 A0A1W2PRG0 241 aa11.08□□□□□ -0.64
CUX1-203ENST00000360264 CCDC117Q8IWD4 279 aaPredicted RBP11.08□□□□□ -0.64
CUX1-203ENST00000360264 MYD88Q99836 296 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 HMGB1P1B2RPK0 211 aaPredicted RBP11.07□□□□□ -0.64
CUX1-203ENST00000360264 TUBB4AP04350 444 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 SLU7O95391 586 aaKnown RBP11.07□□□□□ -0.64
CUX1-203ENST00000360264 GAS8O95995 478 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 CCDC155Q8N6L0 562 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 NBPF7P0C2Y1 421 aaPredicted RBP11.07□□□□□ -0.64
CUX1-203ENST00000360264 ATP2A1O14983 1001 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 PRKCSHP14314 528 aaPredicted RBP11.07□□□□□ -0.64
CUX1-203ENST00000360264 LMAN1P49257 510 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 CCDC152Q4G0S7 254 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 PLCG2P16885 1265 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 NOP2P46087 812 aaKnown RBP11.07□□□□□ -0.64
CUX1-203ENST00000360264 CHMP4BP1P59074 171 aa11.07□□□□□ -0.64
CUX1-203ENST00000360264 IBSPP21815 317 aaPredicted RBP11.07□□□□□ -0.64
CUX1-203ENST00000360264 TSPY3P0CV98 308 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 TSPY8P0CW00 308 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 FBF1Q8TES7 1133 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 PKNOX2Q96KN3 472 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 ZSCAN16Q9H4T2 348 aaPredicted RBP11.06□□□□□ -0.64
CUX1-203ENST00000360264 ANAPC4Q9UJX5 808 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 ZWINTO95229 277 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 CLIP2Q9UDT6 1046 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 EXOC5O00471 708 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 HSF2BPO75031 334 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 IQCGQ9H095 443 aaKnown RBP11.06□□□□□ -0.64
CUX1-203ENST00000360264 CALCOCO1Q9P1Z2 691 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 ZSCAN30Q86W11 494 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 TMEM57Q8N5G2 664 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 TTC14Q96N46 770 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 PUF60Q9UHX1 559 aaKnown RBP11.06□□□□□ -0.64
CUX1-203ENST00000360264 SPAG1Q07617 926 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 OGFOD1Q8N543 542 aa11.06□□□□□ -0.64
CUX1-203ENST00000360264 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 MYCNP04198 464 aaPredicted RBP11.05□□□□□ -0.64
CUX1-203ENST00000360264 ALDH3A1P30838 453 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 FSIP1Q8NA03 581 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 EXOC6BQ9Y2D4 811 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 PAXBP1Q9Y5B6 917 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 UVSSAQ2YD98 709 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 TMEM67Q5HYA8 995 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 BICDL2A1A5D9 508 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 CKAP2LQ8IYA6 745 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 NUDT16Q96DE0 195 aaKnown RBP11.05□□□□□ -0.64
CUX1-203ENST00000360264 TSGA10Q9BZW7 698 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 CNTRLQ7Z7A1 2325 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 NBPF1Q3BBV0 1214 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 NBPF6Q5VWK0 638 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 NBPF5PQ86XG9 351 aaPredicted RBP11.05□□□□□ -0.64
CUX1-203ENST00000360264 NBPF4Q96M43 638 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 ECHDC1Q9NTX5 307 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 ATP2A2P16615 1042 aaKnown RBP11.05□□□□□ -0.64
CUX1-203ENST00000360264 KIAA0753Q2KHM9 967 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 TMCO5BA8MYB1 307 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 GNAT2P19087 354 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 PSMA7O14818 248 aa11.05□□□□□ -0.64
CUX1-203ENST00000360264 CEP128Q6ZU80 1094 aa11.04□□□□□ -0.64
CUX1-203ENST00000360264 SRRTQ9BXP5 876 aaKnown RBP11.04□□□□□ -0.64
CUX1-203ENST00000360264 NEK1Q96PY6 1258 aa11.04□□□□□ -0.64
CUX1-203ENST00000360264 CUL7Q14999 1698 aa11.04□□□□□ -0.64
CUX1-203ENST00000360264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.04□□□□□ -0.642e-6■■□□□ 13.4
CUX1-203ENST00000360264 ESR2Q92731 530 aa11.04□□□□□ -0.64
CUX1-203ENST00000360264 PRPF4BQ13523 1007 aaKnown RBP11.04□□□□□ -0.64
CUX1-203ENST00000360264 NAP1L4Q99733 375 aaKnown RBP11.04□□□□□ -0.64
CUX1-203ENST00000360264 URI1O94763 535 aaPredicted RBP11.04□□□□□ -0.64
CUX1-203ENST00000360264 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
CUX1-203ENST00000360264 IFIT1BQ5T764 474 aaKnown RBP11.04□□□□□ -0.64
CUX1-203ENST00000360264 TMC6Q7Z403 805 aa11.04□□□□□ -0.64
CUX1-203ENST00000360264 C6orf50Q9HD87 102 aa11.04□□□□□ -0.64
CUX1-203ENST00000360264 AKR1B10O60218 316 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 CALML3P27482 149 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 IARSP41252 1262 aaKnown RBP11.03□□□□□ -0.64
CUX1-203ENST00000360264 RTN1Q16799 776 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 CYLC1P35663 651 aaPredicted RBP11.03□□□□□ -0.64
CUX1-203ENST00000360264 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms