RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 PAPPAQ13219 1627 aa31.72■■■□□ 2.67
CUEDC1-201ENST00000360238 CCDC173Q0VFZ6 552 aa31.72■■■□□ 2.67
CUEDC1-201ENST00000360238 RABL6Q3YEC7 729 aaPredicted RBP31.72■■■□□ 2.67
CUEDC1-201ENST00000360238 VPS53Q5VIR6 699 aa31.72■■■□□ 2.67
CUEDC1-201ENST00000360238 CHAMP1Q96JM3 812 aa31.72■■■□□ 2.67
CUEDC1-201ENST00000360238 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.72■■■□□ 2.67
CUEDC1-201ENST00000360238 NUP188Q5SRE5 1749 aa31.72■■■□□ 2.67
CUEDC1-201ENST00000360238 NECTIN1Q15223 517 aa31.71■■■□□ 2.67
CUEDC1-201ENST00000360238 PRPF40BQ6NWY9 871 aaKnown RBP31.7■■■□□ 2.67
CUEDC1-201ENST00000360238 ZSWIM6Q9HCJ5 1215 aa31.7■■■□□ 2.67
CUEDC1-201ENST00000360238 RFX5P48382 616 aaPredicted RBP31.7■■■□□ 2.66
CUEDC1-201ENST00000360238 KLHDC4Q8TBB5 520 aa31.7■■■□□ 2.66
CUEDC1-201ENST00000360238 PCDH11XQ9BZA7 1347 aa31.7■■■□□ 2.66
CUEDC1-201ENST00000360238 PCDH11YQ9BZA8 1340 aa31.7■■■□□ 2.66
CUEDC1-201ENST00000360238 NMIQ13287 307 aaPredicted RBP31.69■■■□□ 2.66
CUEDC1-201ENST00000360238 WDR17Q8IZU2 1322 aa31.69■■■□□ 2.66
CUEDC1-201ENST00000360238 PLBD2Q8NHP8 589 aa31.69■■■□□ 2.66
CUEDC1-201ENST00000360238 PPP1R9BQ96SB3 815 aa31.69■■■□□ 2.66
CUEDC1-201ENST00000360238 ZKSCAN1P17029 563 aaPredicted RBP31.68■■■□□ 2.66
CUEDC1-201ENST00000360238 ANP32BQ92688 251 aaKnown RBP31.68■■■□□ 2.66
CUEDC1-201ENST00000360238 MAP4K1Q92918 833 aa31.68■■■□□ 2.66
CUEDC1-201ENST00000360238 JAKMIP1Q96N16 626 aaKnown RBP31.68■■■□□ 2.66
CUEDC1-201ENST00000360238 MED23Q9ULK4 1368 aa31.68■■■□□ 2.66
CUEDC1-201ENST00000360238 TMEM63CQ9P1W3 806 aa31.68■■■□□ 2.66
CUEDC1-201ENST00000360238 CYP46A1Q9Y6A2 500 aa31.68■■■□□ 2.66
CUEDC1-201ENST00000360238 ABCA3Q99758 1704 aa31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 TRIM44Q96DX7 344 aaPredicted RBP31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 ZSCAN31Q96LW9 406 aaPredicted RBP31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 FAM227BQ96M60 508 aa31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 FSD1Q9BTV5 496 aa31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 RBM27Q9P2N5 1060 aaKnown RBP31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 RBM8AQ9Y5S9 174 aaKnown RBP31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 TCHHQ07283 1943 aa31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 JCADQ9P266 1359 aa31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 SH2B1Q9NRF2 756 aaPredicted RBP31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 PDRG1Q9NUG6 133 aa31.67■■■□□ 2.66
CUEDC1-201ENST00000360238 PIP4K2AP48426 406 aaPredicted RBP31.66■■■□□ 2.66
CUEDC1-201ENST00000360238 PTPN12Q05209 780 aaKnown RBP31.66■■■□□ 2.66
CUEDC1-201ENST00000360238 BRINP3Q76B58 766 aa31.66■■■□□ 2.66
CUEDC1-201ENST00000360238 UBE3BQ7Z3V4 1068 aa31.66■■■□□ 2.66
CUEDC1-201ENST00000360238 BOLA2Q9H3K6 86 aa31.66■■■□□ 2.66
CUEDC1-201ENST00000360238 RFX7Q2KHR2 1363 aa31.66■■■□□ 2.66
CUEDC1-201ENST00000360238 CLCN1P35523 988 aa31.66■■■□□ 2.66
CUEDC1-201ENST00000360238 ADCK5Q3MIX3 580 aa31.66■■■□□ 2.66
CUEDC1-201ENST00000360238 SHANK3Q9BYB0 1731 aa31.65■■■□□ 2.66
CUEDC1-201ENST00000360238 CREB3L3Q68CJ9 461 aa31.65■■■□□ 2.66
CUEDC1-201ENST00000360238 TJP1Q07157 1748 aa31.65■■■□□ 2.66
CUEDC1-201ENST00000360238 COL5A2P05997 1499 aaPredicted RBP31.64■■■□□ 2.66
CUEDC1-201ENST00000360238 NSFL1CQ9UNZ2 370 aaKnown RBP31.64■■■□□ 2.66
CUEDC1-201ENST00000360238 CASP7P55210 303 aa31.64■■■□□ 2.66
CUEDC1-201ENST00000360238 LRSAM1Q6UWE0 723 aa31.64■■■□□ 2.66
CUEDC1-201ENST00000360238 SMC3Q9UQE7 1217 aa31.64■■■□□ 2.66
CUEDC1-201ENST00000360238 KCPQ6ZWJ8 1503 aa31.64■■■□□ 2.66
CUEDC1-201ENST00000360238 TNNI3KQ59H18 835 aa31.63■■■□□ 2.65
CUEDC1-201ENST00000360238 TMEM87AQ8NBN3 555 aa31.63■■■□□ 2.65
CUEDC1-201ENST00000360238 FPGT-TNNI3KV9GXZ4 949 aa31.63■■■□□ 2.65
CUEDC1-201ENST00000360238 A0A087WZG4 1122 aa31.63■■■□□ 2.65
CUEDC1-201ENST00000360238 A0A0D9SFI3 127 aa31.63■■■□□ 2.65
CUEDC1-201ENST00000360238 ZSCAN22P10073 491 aaPredicted RBP31.63■■■□□ 2.65
CUEDC1-201ENST00000360238 CPA1P15085 419 aa31.63■■■□□ 2.65
CUEDC1-201ENST00000360238 ATP5JP18859 108 aa31.63■■■□□ 2.65
CUEDC1-201ENST00000360238 ERVV-2B6SEH9 535 aa31.62■■■□□ 2.65
CUEDC1-201ENST00000360238 KCNJ4P48050 445 aa31.62■■■□□ 2.65
CUEDC1-201ENST00000360238 PRIM1P49642 420 aaKnown RBP31.62■■■□□ 2.65
CUEDC1-201ENST00000360238 ZCRB1Q8TBF4 217 aaKnown RBP31.62■■■□□ 2.65
CUEDC1-201ENST00000360238 PRDM11Q9NQV5 511 aa31.62■■■□□ 2.65
CUEDC1-201ENST00000360238 SYAP1Q96A49 352 aaPredicted RBP31.61■■■□□ 2.65
CUEDC1-201ENST00000360238 ESPNB1AK53 854 aa31.61■■■□□ 2.65
CUEDC1-201ENST00000360238 STX6O43752 255 aa31.61■■■□□ 2.65
CUEDC1-201ENST00000360238 PSMA5P28066 241 aa31.61■■■□□ 2.65
CUEDC1-201ENST00000360238 RNF20Q5VTR2 975 aa31.61■■■□□ 2.65
CUEDC1-201ENST00000360238 DBNLQ9UJU6 430 aaKnown RBP31.61■■■□□ 2.65
CUEDC1-201ENST00000360238 ATP5J2-PTCD1G3V325 749 aa31.6■■■□□ 2.65
CUEDC1-201ENST00000360238 SLC27A2O14975 620 aa31.6■■■□□ 2.65
CUEDC1-201ENST00000360238 PTCD1O75127 700 aaKnown RBP31.6■■■□□ 2.65
CUEDC1-201ENST00000360238 LARGE1O95461 756 aa31.6■■■□□ 2.65
CUEDC1-201ENST00000360238 RBSNQ9H1K0 784 aa31.6■■■□□ 2.65
CUEDC1-201ENST00000360238 SYT1P21579 422 aa31.59■■■□□ 2.65
CUEDC1-201ENST00000360238 TFCP2Q12800 502 aa31.59■■■□□ 2.65
CUEDC1-201ENST00000360238 TOM1L2Q6ZVM7 507 aa31.59■■■□□ 2.65
CUEDC1-201ENST00000360238 SOS2Q07890 1332 aaPredicted RBP31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 SYCE3A1L190 88 aa31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 NBPF26B4DH59 902 aa31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 NKX1-1Q15270 411 aaPredicted RBP31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 NBPF14Q5TI25 921 aa31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 NBPF10Q6P3W6 841 aaKnown RBP31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 NBPF15Q8N660 670 aa31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 JARID2Q92833 1246 aaPredicted RBP31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 HMG20BQ9P0W2 317 aa31.58■■■□□ 2.65
CUEDC1-201ENST00000360238 LARP6Q9BRS8 491 aaKnown RBP31.57■■■□□ 2.64
CUEDC1-201ENST00000360238 ATP6V1DQ9Y5K8 247 aa31.57■■■□□ 2.64
CUEDC1-201ENST00000360238 TNS2Q63HR2 1409 aa31.56■■■□□ 2.64
CUEDC1-201ENST00000360238 H7C1W4 665 aa31.56■■■□□ 2.64
CUEDC1-201ENST00000360238 CCDC83Q8IWF9 413 aa31.56■■■□□ 2.64
CUEDC1-201ENST00000360238 USP48Q86UV5 1035 aa31.56■■■□□ 2.64
CUEDC1-201ENST00000360238 F13A1P00488 732 aa31.55■■■□□ 2.64
CUEDC1-201ENST00000360238 HSPA2P54652 639 aa31.55■■■□□ 2.64
CUEDC1-201ENST00000360238 ALDH8A1Q9H2A2 487 aaPredicted RBP31.55■■■□□ 2.64
CUEDC1-201ENST00000360238 TSGA10IPQ3SY00 556 aa31.54■■■□□ 2.64
CUEDC1-201ENST00000360238 PHF14O94880 888 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms