RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 SIL1Q9H173 461 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-202ENST00000359366 MRC1P22897 1456 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 GLI3P10071 1580 aa6.29□□□□□ -1.4
ATXN3-202ENST00000359366 ERVV-2B6SEH9 535 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 EXOC5O00471 708 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 VASPP50552 380 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-202ENST00000359366 KCNQ4P56696 695 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 NBR1Q14596 966 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 EPHA10Q5JZY3 1008 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 TBC1D9Q6ZT07 1266 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 ANKRD13DQ6ZTN6 518 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 SPRYD3Q8NCJ5 442 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 KAZALD1Q96I82 304 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 NAP1L5Q96NT1 182 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-202ENST00000359366 BICC1Q9H694 974 aaKnown RBP6.28□□□□□ -1.4
ATXN3-202ENST00000359366 ATG3Q9NT62 314 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 PLCH1Q4KWH8 1693 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 COL14A1Q05707 1796 aaKnown RBP6.28□□□□□ -1.4
ATXN3-202ENST00000359366 NEURL1BA8MQ27 555 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 RRP9O43818 475 aaKnown RBP6.28□□□□□ -1.4
ATXN3-202ENST00000359366 NKX1-1Q15270 411 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-202ENST00000359366 FAM98CQ17RN3 349 aaKnown RBP6.28□□□□□ -1.4
ATXN3-202ENST00000359366 UBE3BQ7Z3V4 1068 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 SLC4A9Q96Q91 983 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 HS3ST6Q96QI5 342 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 KCPQ6ZWJ8 1503 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 ITGB4P16144 1822 aa6.28□□□□□ -1.4
ATXN3-202ENST00000359366 PXDNLA1KZ92 1463 aa6.27□□□□□ -1.4
ATXN3-202ENST00000359366 GRM8O00222 908 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 DDX58O95786 925 aaKnown RBP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 SDSP20132 328 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 OS9Q13438 667 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 BMP2KLQ5H9B9 411 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 TTC22Q5TAA0 569 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 PTF1AQ7RTS3 328 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 IL27Q8NEV9 243 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 NGLY1Q96IV0 654 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 LRRCC1Q9C099 1032 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 BCCIPQ9P287 314 aaKnown RBP eCLIP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 N4BP2Q86UW6 1770 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 SPATA31A1Q5TZJ5 1347 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 KCNQ2O43526 872 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 GCKRQ14397 625 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 SMIM5Q71RC9 77 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 MARCH10Q8NA82 808 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 LINS1Q8NG48 757 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 SSH3Q8TE77 659 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 TBC1D32Q96NH3 1257 aa6.27□□□□□ -1.41
ATXN3-202ENST00000359366 CCDC85AQ96PX6 553 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 METTL22Q9BUU2 404 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 IBTKQ9P2D0 1353 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 COL22A1Q8NFW1 1626 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-202ENST00000359366 DISP2A7MBM2 1401 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 PDE1AP54750 535 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 NEXNQ0ZGT2 675 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 DDB1Q16531 1140 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 UNC5CLQ8IV45 518 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 C22orf23Q9BZE7 217 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 AFDNP55196 1824 aaKnown RBP6.26□□□□□ -1.41
ATXN3-202ENST00000359366 A0A087WZG4 1122 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 SYNE4Q8N205 404 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 RILPL2Q969X0 211 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 UPF2Q9HAU5 1272 aaKnown RBP6.26□□□□□ -1.41
ATXN3-202ENST00000359366 CHMP3Q9Y3E7 222 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 UBR2Q8IWV8 1755 aa6.26□□□□□ -1.41
ATXN3-202ENST00000359366 TRIM6-TRIM34B2RNG4 842 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 ALDH1L1O75891 902 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 GPTP24298 496 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 RHPN1Q8TCX5 695 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 CHMP4AQ9BY43 222 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 ARFGEF2Q9Y6D5 1785 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 SPATA31A5Q5VU36 1347 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 SPATA31A7Q8IWB4 1347 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 MX1P20591 662 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 ZBTB1Q9Y2K1 713 aa6.25□□□□□ -1.41
ATXN3-202ENST00000359366 FAM177BA6PVY3 158 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 CDC45O75419 566 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 HSPA1LP34931 641 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 HLFQ16534 295 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 PLBD2Q8NHP8 589 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 CCDC8Q9H0W5 538 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-202ENST00000359366 SLKQ9H2G2 1235 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-202ENST00000359366 TLR7Q9NYK1 1049 aaKnown RBP6.24□□□□□ -1.41
ATXN3-202ENST00000359366 TBC1D2BQ9UPU7 963 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 NRAPQ86VF7 1730 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 DOT1LQ8TEK3 1739 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 BCL9O00512 1426 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 TNS2Q63HR2 1409 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 LAMB4A4D0S4 1761 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 PAPPAQ13219 1627 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 FAM205CA6NFA0 338 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 HSP90B1P14625 803 aaKnown RBP6.24□□□□□ -1.41
ATXN3-202ENST00000359366 DDRGK1Q96HY6 314 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 ZNF594Q96JF6 807 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-202ENST00000359366 NDUFB9Q9Y6M9 179 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 SALL3Q9BXA9 1300 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.24□□□□□ -1.41
ATXN3-202ENST00000359366 LRP6O75581 1613 aa6.24□□□□□ -1.41
ATXN3-202ENST00000359366 SASH1O94885 1247 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms