RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PHKG2P15735 406 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 SPC24Q8NBT2 197 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 TRMT112Q9UI30 125 aaKnown RBP16.91■□□□□ 0.3
SIRPA-202ENST00000358771 CDC42BPGQ6DT37 1551 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
SIRPA-202ENST00000358771 GOLGA6L19H0YKK7 550 aa16.9■□□□□ 0.3
SIRPA-202ENST00000358771 SNX14Q9Y5W7 946 aa16.9■□□□□ 0.3
SIRPA-202ENST00000358771 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
SIRPA-202ENST00000358771 MPHOSPH8Q99549 860 aa16.9■□□□□ 0.3
SIRPA-202ENST00000358771 CRB1P82279 1406 aa16.9■□□□□ 0.3
SIRPA-202ENST00000358771 ATP2B1P20020 1258 aa16.9■□□□□ 0.3
SIRPA-202ENST00000358771 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
SIRPA-202ENST00000358771 METTL22Q9BUU2 404 aaPredicted RBP16.9■□□□□ 0.3
SIRPA-202ENST00000358771 BCL11BQ9C0K0 894 aaPredicted RBP16.9■□□□□ 0.3
SIRPA-202ENST00000358771 ERBB3P21860 1342 aa16.9■□□□□ 0.3
SIRPA-202ENST00000358771 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.3
SIRPA-202ENST00000358771 SASS6Q6UVJ0 657 aa16.89■□□□□ 0.3
SIRPA-202ENST00000358771 CHST3Q7LGC8 479 aa16.89■□□□□ 0.3
SIRPA-202ENST00000358771 USP48Q86UV5 1035 aa16.89■□□□□ 0.3
SIRPA-202ENST00000358771 SPATA32Q96LK8 384 aa16.89■□□□□ 0.3
SIRPA-202ENST00000358771 KIF2CQ99661 725 aa16.89■□□□□ 0.3
SIRPA-202ENST00000358771 IL2RBP14784 551 aa16.89■□□□□ 0.29
SIRPA-202ENST00000358771 CHAF1AQ13111 956 aaPredicted RBP16.89■□□□□ 0.29
SIRPA-202ENST00000358771 R3HCC1Q9Y3T6 440 aaKnown RBP16.89■□□□□ 0.29
SIRPA-202ENST00000358771 CREB3L3Q68CJ9 461 aa16.89■□□□□ 0.29
SIRPA-202ENST00000358771 BRF1Q92994 677 aa16.89■□□□□ 0.29
SIRPA-202ENST00000358771 FAM89AQ96GI7 184 aa16.89■□□□□ 0.29
SIRPA-202ENST00000358771 TBC1D2BQ9UPU7 963 aa16.89■□□□□ 0.29
SIRPA-202ENST00000358771 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
SIRPA-202ENST00000358771 PTH1RQ03431 593 aa16.88■□□□□ 0.29
SIRPA-202ENST00000358771 KRT32Q14532 448 aa16.88■□□□□ 0.29
SIRPA-202ENST00000358771 GLIPR1L2Q4G1C9 344 aa16.88■□□□□ 0.29
SIRPA-202ENST00000358771 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
SIRPA-202ENST00000358771 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
SIRPA-202ENST00000358771 SPATA31D1Q6ZQQ2 1576 aa16.88■□□□□ 0.29
SIRPA-202ENST00000358771 FAM173BQ6P4H8 233 aa16.88■□□□□ 0.29
SIRPA-202ENST00000358771 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
SIRPA-202ENST00000358771 SH2B1Q9NRF2 756 aaPredicted RBP16.88■□□□□ 0.29
SIRPA-202ENST00000358771 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
SIRPA-202ENST00000358771 SYNE3Q6ZMZ3 975 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 SDF4Q9BRK5 362 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 TTLL7Q6ZT98 887 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 GAS2L3Q86XJ1 694 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 CHMP4CQ96CF2 233 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 NEK1Q96PY6 1258 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 OSBPL3Q9H4L5 887 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 CCDC171Q6TFL3 1326 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 NPHP4O75161 1426 aaPredicted RBP16.87■□□□□ 0.29
SIRPA-202ENST00000358771 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
SIRPA-202ENST00000358771 SYT1P21579 422 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 CKAP2LQ8IYA6 745 aa16.87■□□□□ 0.29
SIRPA-202ENST00000358771 RAD50Q92878 1312 aa16.86■□□□□ 0.29
SIRPA-202ENST00000358771 EXOC5O00471 708 aa16.86■□□□□ 0.29
SIRPA-202ENST00000358771 GOLGA6L6A8MZA4 724 aa16.86■□□□□ 0.29
SIRPA-202ENST00000358771 HSPA4P34932 840 aa16.86■□□□□ 0.29
SIRPA-202ENST00000358771 ME1P48163 572 aa16.86■□□□□ 0.29
SIRPA-202ENST00000358771 USP25Q9UHP3 1055 aa16.86■□□□□ 0.29
SIRPA-202ENST00000358771 GIMAP6Q6P9H5 292 aa16.85■□□□□ 0.29
SIRPA-202ENST00000358771 TNMDQ9H2S6 317 aa16.85■□□□□ 0.29
SIRPA-202ENST00000358771 MTMR7Q9Y216 660 aa16.85■□□□□ 0.29
SIRPA-202ENST00000358771 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
SIRPA-202ENST00000358771 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
SIRPA-202ENST00000358771 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
SIRPA-202ENST00000358771 ABCF2Q9UG63 623 aa16.85■□□□□ 0.29
SIRPA-202ENST00000358771 TECPR2O15040 1411 aa16.85■□□□□ 0.29
SIRPA-202ENST00000358771 TRIM29Q14134 588 aa16.85■□□□□ 0.29
SIRPA-202ENST00000358771 HCLS1P14317 486 aaPredicted RBP16.84■□□□□ 0.29
SIRPA-202ENST00000358771 CREBRFQ8IUR6 639 aa16.84■□□□□ 0.29
SIRPA-202ENST00000358771 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
SIRPA-202ENST00000358771 STAP2Q9UGK3 403 aa16.84■□□□□ 0.29
SIRPA-202ENST00000358771 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
SIRPA-202ENST00000358771 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
SIRPA-202ENST00000358771 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
SIRPA-202ENST00000358771 TRIM5Q9C035 493 aa16.84■□□□□ 0.29
SIRPA-202ENST00000358771 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.29
SIRPA-202ENST00000358771 LMBRD1Q9NUN5 540 aa16.84■□□□□ 0.29
SIRPA-202ENST00000358771 CCDC82Q8N4S0 544 aa16.83■□□□□ 0.29
SIRPA-202ENST00000358771 IFT172Q9UG01 1749 aa16.83■□□□□ 0.29
SIRPA-202ENST00000358771 A0A0D9SFI3 127 aa16.83■□□□□ 0.28
SIRPA-202ENST00000358771 FAM13BQ9NYF5 915 aa16.83■□□□□ 0.28
SIRPA-202ENST00000358771 SLAIN2Q9P270 581 aa16.83■□□□□ 0.28
SIRPA-202ENST00000358771 ADCK5Q3MIX3 580 aa16.83■□□□□ 0.28
SIRPA-202ENST00000358771 KDRP35968 1356 aa16.83■□□□□ 0.28
SIRPA-202ENST00000358771 AKAP17AQ02040 695 aaKnown RBP16.82■□□□□ 0.28
SIRPA-202ENST00000358771 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 PLBD2Q8NHP8 589 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 NUP62CLQ9H1M0 184 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 RRAGDQ9NQL2 400 aaPredicted RBP16.82■□□□□ 0.28
SIRPA-202ENST00000358771 IQSEC3Q9UPP2 1182 aaPredicted RBP16.82■□□□□ 0.28
SIRPA-202ENST00000358771 MCMDC2Q4G0Z9 681 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 Q6ZUG5 572 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 CCDC39Q9UFE4 941 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 AKAP2Q9Y2D5 859 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 ATP10DQ9P241 1426 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 GADD45BO75293 160 aaPredicted RBP16.82■□□□□ 0.28
SIRPA-202ENST00000358771 CCDC192P0DO97 292 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms