RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 H2AFXP16104 143 aaPredicted RBP13.27□□□□□ -0.29
PSEN1-202ENST00000357710 ACTN2P35609 894 aa13.27□□□□□ -0.29
PSEN1-202ENST00000357710 MAGEA8P43361 318 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 LEKR1Q6ZMV7 388 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 TEX11Q8IYF3 940 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 ST7Q9NRC1 585 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 MKRN1Q9UHC7 482 aaKnown RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 FHOD1Q9Y613 1164 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 STRCQ7RTU9 1775 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 EIF3CLB5ME19 914 aaKnown RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 TTLL5Q6EMB2 1281 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 ERC1Q8IUD2 1116 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 EIF3CQ99613 913 aaKnown RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 UBXN6Q9BZV1 441 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 PRR36Q9H6K5 1346 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 CPSF1Q10570 1443 aaKnown RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 ADCY5O95622 1261 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 CCDC97Q96F63 343 aaPredicted RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 KDM4CQ9H3R0 1056 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
PSEN1-202ENST00000357710 TMEM63CQ9P1W3 806 aa13.26□□□□□ -0.29
PSEN1-202ENST00000357710 CCT2P78371 535 aaKnown RBP13.25□□□□□ -0.29
PSEN1-202ENST00000357710 EDC4Q6P2E9 1401 aaKnown RBP13.25□□□□□ -0.29
PSEN1-202ENST00000357710 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
PSEN1-202ENST00000357710 KINO60870 393 aaKnown RBP13.25□□□□□ -0.29
PSEN1-202ENST00000357710 PPFIA2O75334 1257 aa13.25□□□□□ -0.29
PSEN1-202ENST00000357710 RBM5P52756 815 aaKnown RBP eCLIP13.24□□□□□ -0.29
PSEN1-202ENST00000357710 DUSP27Q5VZP5 1158 aa13.24□□□□□ -0.29
PSEN1-202ENST00000357710 ARGLU1Q9NWB6 273 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-202ENST00000357710 PNMA6AP0CW24 399 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-202ENST00000357710 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
PSEN1-202ENST00000357710 PLA2G4AP47712 749 aa13.24□□□□□ -0.29
PSEN1-202ENST00000357710 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
PSEN1-202ENST00000357710 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
PSEN1-202ENST00000357710 IRAK4Q9NWZ3 460 aa13.24□□□□□ -0.29
PSEN1-202ENST00000357710 NUB1Q9Y5A7 615 aa13.24□□□□□ -0.29
PSEN1-202ENST00000357710 A0A087WUV0 522 aaPredicted RBP13.23□□□□□ -0.29
PSEN1-202ENST00000357710 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
PSEN1-202ENST00000357710 ABCD1P33897 745 aa13.23□□□□□ -0.29
PSEN1-202ENST00000357710 NEDD9Q14511 834 aa13.23□□□□□ -0.29
PSEN1-202ENST00000357710 CRYMQ14894 314 aa13.23□□□□□ -0.29
PSEN1-202ENST00000357710 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
PSEN1-202ENST00000357710 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.23□□□□□ -0.29
PSEN1-202ENST00000357710 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
PSEN1-202ENST00000357710 CPSF2Q9P2I0 782 aaKnown RBP13.23□□□□□ -0.29
PSEN1-202ENST00000357710 PYCARDQ9ULZ3 195 aa13.23□□□□□ -0.29
PSEN1-202ENST00000357710 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-202ENST00000357710 CAND2O75155 1236 aa13.22□□□□□ -0.29
PSEN1-202ENST00000357710 GRIK3Q13003 919 aa13.22□□□□□ -0.29
PSEN1-202ENST00000357710 NAIF1Q69YI7 327 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-202ENST00000357710 RNF214Q8ND24 703 aa13.22□□□□□ -0.29
PSEN1-202ENST00000357710 SPATS2LQ9NUQ6 558 aaKnown RBP13.22□□□□□ -0.29
PSEN1-202ENST00000357710 ELP1O95163 1332 aa13.22□□□□□ -0.29
PSEN1-202ENST00000357710 NEBLO76041 1014 aa13.22□□□□□ -0.29
PSEN1-202ENST00000357710 SCP2P22307 547 aa13.22□□□□□ -0.29
PSEN1-202ENST00000357710 ELF1P32519 619 aa13.22□□□□□ -0.29
PSEN1-202ENST00000357710 RBBP5Q15291 538 aaKnown RBP13.22□□□□□ -0.29
PSEN1-202ENST00000357710 STRCP1A6NGW2 1772 aa13.22□□□□□ -0.29
PSEN1-202ENST00000357710 DNAJC14Q6Y2X3 702 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-202ENST00000357710 GBP6Q6ZN66 633 aa13.21□□□□□ -0.29
PSEN1-202ENST00000357710 TADA2BQ86TJ2 420 aa13.21□□□□□ -0.29
PSEN1-202ENST00000357710 VEZTQ9HBM0 779 aa13.21□□□□□ -0.29
PSEN1-202ENST00000357710 RBM27Q9P2N5 1060 aaKnown RBP13.21□□□□□ -0.29
PSEN1-202ENST00000357710 CCDC171Q6TFL3 1326 aa13.21□□□□□ -0.29
PSEN1-202ENST00000357710 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
PSEN1-202ENST00000357710 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
PSEN1-202ENST00000357710 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
PSEN1-202ENST00000357710 KCNF1Q9H3M0 494 aa13.21□□□□□ -0.29
PSEN1-202ENST00000357710 PDZRN3Q9UPQ7 1066 aa13.21□□□□□ -0.29
PSEN1-202ENST00000357710 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
PSEN1-202ENST00000357710 EIF5P55010 431 aaKnown RBP13.2□□□□□ -0.3
PSEN1-202ENST00000357710 TTC19Q6DKK2 380 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-202ENST00000357710 TRIM6Q9C030 488 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-202ENST00000357710 KDM4AO75164 1064 aa13.2□□□□□ -0.3
PSEN1-202ENST00000357710 MNAT1P51948 309 aa13.2□□□□□ -0.3
PSEN1-202ENST00000357710 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-202ENST00000357710 IL16Q14005 1332 aa13.2□□□□□ -0.3
PSEN1-202ENST00000357710 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.3
PSEN1-202ENST00000357710 SLU7O95391 586 aaKnown RBP13.2□□□□□ -0.3
PSEN1-202ENST00000357710 SLC5A9Q2M3M2 681 aa13.2□□□□□ -0.3
PSEN1-202ENST00000357710 RWDD1Q9H446 243 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-202ENST00000357710 TBC1D2BQ9UPU7 963 aa13.2□□□□□ -0.3
PSEN1-202ENST00000357710 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
PSEN1-202ENST00000357710 KIF2CQ99661 725 aa13.19□□□□□ -0.3
PSEN1-202ENST00000357710 CHCHD3Q9NX63 227 aaKnown RBP13.19□□□□□ -0.3
PSEN1-202ENST00000357710 ACEP12821 1306 aa13.19□□□□□ -0.3
PSEN1-202ENST00000357710 USP6P35125 1406 aa13.19□□□□□ -0.3
PSEN1-202ENST00000357710 PRPHP41219 470 aa13.19□□□□□ -0.3
PSEN1-202ENST00000357710 EXOC8Q8IYI6 725 aa13.19□□□□□ -0.3
PSEN1-202ENST00000357710 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
PSEN1-202ENST00000357710 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-202ENST00000357710 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 MYBPC2Q14324 1141 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 CEP135Q66GS9 1140 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 ARMC2Q8NEN0 867 aa13.18□□□□□ -0.3
PSEN1-202ENST00000357710 FYB1O15117 783 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms