RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SLC12A5Q9H2X9 1139 aa14.7□□□□□ -0.06
SMC4-202ENST00000357388 RNF41Q9H4P4 317 aaPredicted RBP14.7□□□□□ -0.06
SMC4-202ENST00000357388 A0A087WZG4 1122 aa14.7□□□□□ -0.06
SMC4-202ENST00000357388 LACTBP83111 547 aaPredicted RBP14.7□□□□□ -0.06
SMC4-202ENST00000357388 AMOTQ4VCS5 1084 aa14.7□□□□□ -0.06
SMC4-202ENST00000357388 CCDC110Q8TBZ0 833 aa14.7□□□□□ -0.06
SMC4-202ENST00000357388 PAIP2Q9BPZ3 127 aaKnown RBP14.7□□□□□ -0.06
SMC4-202ENST00000357388 ABCC11Q96J66 1382 aa14.7□□□□□ -0.06
SMC4-202ENST00000357388 SARNPP82979 210 aaKnown RBP14.7□□□□□ -0.06
SMC4-202ENST00000357388 SSRP1Q08945 709 aaKnown RBP14.7□□□□□ -0.06
SMC4-202ENST00000357388 IQCA1Q86XH1 822 aa14.7□□□□□ -0.06
SMC4-202ENST00000357388 CCDC114Q96M63 670 aa14.7□□□□□ -0.06
SMC4-202ENST00000357388 TTC12Q9H892 705 aaPredicted RBP14.69□□□□□ -0.06
SMC4-202ENST00000357388 SLC5A1P13866 664 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 CCDC102BQ68D86 513 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 B4GALNT4Q76KP1 1039 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 NAPBQ9H115 298 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 ATP2C2O75185 946 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 SKILP12757 684 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 ZC3H6P61129 1189 aaKnown RBP14.69□□□□□ -0.06
SMC4-202ENST00000357388 CCDC96Q2M329 555 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 FAM200AQ8TCP9 573 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 DRC1Q96MC2 740 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 NOP2P46087 812 aaKnown RBP14.69□□□□□ -0.06
SMC4-202ENST00000357388 CCDC40Q4G0X9 1142 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 TTC21AQ8NDW8 1320 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 TACC1O75410 805 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 LDHCP07864 332 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 LIG1P18858 919 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 CHMP4BP1P59074 171 aa14.69□□□□□ -0.06
SMC4-202ENST00000357388 DNA2P51530 1060 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 LMNTD2Q8IXW0 634 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 LUC7L2Q9Y383 392 aaKnown RBP14.68□□□□□ -0.06
SMC4-202ENST00000357388 CTAGE9A4FU28 777 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 CALML4Q96GE6 196 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 MACROD2A1Z1Q3 448 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 SETDB1Q15047 1291 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 PRG4Q92954 1404 aaPredicted RBP14.68□□□□□ -0.06
SMC4-202ENST00000357388 PRPF4BQ13523 1007 aaKnown RBP14.68□□□□□ -0.06
SMC4-202ENST00000357388 TMEM57Q8N5G2 664 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 LMBR1Q8WVP7 490 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 IFT74Q96LB3 600 aa14.68□□□□□ -0.06
SMC4-202ENST00000357388 C11orf95C9JLR9 678 aaPredicted RBP14.67□□□□□ -0.06
SMC4-202ENST00000357388 BMP15O95972 392 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 KRT83P78385 493 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 SAMD15Q9P1V8 674 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 CCDC61Q9Y6R9 512 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 IFIT5Q13325 482 aaKnown RBP14.67□□□□□ -0.06
SMC4-202ENST00000357388 MCM6Q14566 821 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 DNAJC21Q5F1R6 531 aaKnown RBP14.67□□□□□ -0.06
SMC4-202ENST00000357388 PIBF1Q8WXW3 757 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 FERMT2Q96AC1 680 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 LRRC45Q96CN5 670 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 TMX1Q9H3N1 280 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 DNAI1Q9UI46 699 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 MINDY4BA8MYZ0 360 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 ATP2A1O14983 1001 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 NFE2L2Q16236 605 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 MIPOL1Q8TD10 442 aa14.67□□□□□ -0.06
SMC4-202ENST00000357388 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 AKR1B10O60218 316 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 GJB2P29033 226 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 SH3BGRP55822 239 aaPredicted RBP14.66□□□□□ -0.06
SMC4-202ENST00000357388 UBASH3AP57075 661 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 FAM76AQ8TAV0 307 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 IL1RAPL2Q9NP60 686 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 NKTRP30414 1462 aaKnown RBP14.66□□□□□ -0.06
SMC4-202ENST00000357388 CASKIN1Q8WXD9 1431 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 CCDC194A0A1B0GVG4 234 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 MAP3K9P80192 1104 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 TCP11L1Q9NUJ3 509 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 HMG20BQ9P0W2 317 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 FAM184BQ9ULE4 1060 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 SLC12A7Q9Y666 1083 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 GABPB1Q06547 395 aaPredicted RBP14.66□□□□□ -0.06
SMC4-202ENST00000357388 HDXQ7Z353 690 aa14.66□□□□□ -0.06
SMC4-202ENST00000357388 TEX13AQ9BXU3 409 aaPredicted RBP14.66□□□□□ -0.06
SMC4-202ENST00000357388 PABPN1LA6NDY0 278 aaKnown RBP14.65□□□□□ -0.06
SMC4-202ENST00000357388 N4BP3O15049 544 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 TUBB2AQ13885 445 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 BMP2KLQ5H9B9 411 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 RAB3IL1Q8TBN0 382 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 TUBB2BQ9BVA1 445 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 NAA25Q14CX7 972 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 CACNA2D3Q8IZS8 1091 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 CABP5Q9NP86 173 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 ALDH3A1P30838 453 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 CCDC85AQ96PX6 553 aaPredicted RBP14.65□□□□□ -0.06
SMC4-202ENST00000357388 TRIM7Q9C029 511 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 ZBTB16Q05516 673 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 CPLX4Q7Z7G2 160 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 VPS18Q9P253 973 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 ZWINTO95229 277 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 TBC1D32Q96NH3 1257 aa14.65□□□□□ -0.06
SMC4-202ENST00000357388 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
SMC4-202ENST00000357388 TRAF1Q13077 416 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 TBC1D5Q92609 795 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms