RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 VAMP4O75379 141 aa17.51■□□□□ 0.39
SHANK2-202ENST00000357171 GOLGA2Q08379 1002 aa17.51■□□□□ 0.39
SHANK2-202ENST00000357171 TRIM28Q13263 835 aaKnown RBP17.51■□□□□ 0.39
SHANK2-202ENST00000357171 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
SHANK2-202ENST00000357171 NUTM1Q86Y26 1132 aa17.51■□□□□ 0.39
SHANK2-202ENST00000357171 ZNF784Q8NCA9 323 aaPredicted RBP17.51■□□□□ 0.39
SHANK2-202ENST00000357171 ARHGAP27Q6ZUM4 889 aa17.5■□□□□ 0.39
SHANK2-202ENST00000357171 CNKSR1Q969H4 720 aa17.5■□□□□ 0.39
SHANK2-202ENST00000357171 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
SHANK2-202ENST00000357171 NPR1P16066 1061 aa17.49■□□□□ 0.39
SHANK2-202ENST00000357171 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
SHANK2-202ENST00000357171 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
SHANK2-202ENST00000357171 C7orf43Q8WVR3 580 aa17.49■□□□□ 0.39
SHANK2-202ENST00000357171 ZNF622Q969S3 477 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHANK2-202ENST00000357171 UTP14AQ9BVJ6 771 aaKnown RBP17.49■□□□□ 0.39
SHANK2-202ENST00000357171 MYH16Q9H6N6 1097 aa17.49■□□□□ 0.39
SHANK2-202ENST00000357171 DICER1Q9UPY3 1922 aaKnown RBP17.49■□□□□ 0.39
SHANK2-202ENST00000357171 MIER1Q8N108 512 aa17.48■□□□□ 0.39
SHANK2-202ENST00000357171 HOXA10P31260 410 aaPredicted RBP17.47■□□□□ 0.39
SHANK2-202ENST00000357171 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
SHANK2-202ENST00000357171 STK31Q9BXU1 1019 aa17.46■□□□□ 0.39
SHANK2-202ENST00000357171 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
SHANK2-202ENST00000357171 RIC3Q7Z5B4 369 aa17.45■□□□□ 0.38
SHANK2-202ENST00000357171 SNED1Q8TER0 1413 aa17.45■□□□□ 0.38
SHANK2-202ENST00000357171 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
SHANK2-202ENST00000357171 NFKBIEO00221 500 aa17.44■□□□□ 0.38
SHANK2-202ENST00000357171 DDX58O95786 925 aaKnown RBP17.44■□□□□ 0.38
SHANK2-202ENST00000357171 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
SHANK2-202ENST00000357171 ALDH1B1P30837 517 aa17.44■□□□□ 0.38
SHANK2-202ENST00000357171 KSR2Q6VAB6 950 aa17.44■□□□□ 0.38
SHANK2-202ENST00000357171 G2E3Q7L622 706 aa17.44■□□□□ 0.38
SHANK2-202ENST00000357171 TRMT2AQ8IZ69 625 aaKnown RBP17.44■□□□□ 0.38
SHANK2-202ENST00000357171 METTL22Q9BUU2 404 aaPredicted RBP17.44■□□□□ 0.38
SHANK2-202ENST00000357171 TRMT112Q9UI30 125 aaKnown RBP17.44■□□□□ 0.38
SHANK2-202ENST00000357171 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
SHANK2-202ENST00000357171 E9PSI1 815 aa17.43■□□□□ 0.38
SHANK2-202ENST00000357171 ATP5J2-PTCD1G3V325 749 aa17.43■□□□□ 0.38
SHANK2-202ENST00000357171 C21orf2O43822 256 aa17.43■□□□□ 0.38
SHANK2-202ENST00000357171 PRELPP51888 382 aa17.43■□□□□ 0.38
SHANK2-202ENST00000357171 SLFN5Q08AF3 891 aa17.43■□□□□ 0.38
SHANK2-202ENST00000357171 SYNE4Q8N205 404 aa17.43■□□□□ 0.38
SHANK2-202ENST00000357171 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
SHANK2-202ENST00000357171 CRAMP1Q96RY5 1269 aa17.43■□□□□ 0.38
SHANK2-202ENST00000357171 TCERG1O14776 1098 aaKnown RBP17.42■□□□□ 0.38
SHANK2-202ENST00000357171 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
SHANK2-202ENST00000357171 CCDC191Q8NCU4 936 aa17.42■□□□□ 0.38
SHANK2-202ENST00000357171 MAP3K2Q9Y2U5 619 aa17.42■□□□□ 0.38
SHANK2-202ENST00000357171 TAF1P21675 1872 aa17.42■□□□□ 0.38
SHANK2-202ENST00000357171 PI4KAP2A4QPH2 592 aa17.41■□□□□ 0.38
SHANK2-202ENST00000357171 RASSF7Q02833 373 aa17.41■□□□□ 0.38
SHANK2-202ENST00000357171 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
SHANK2-202ENST00000357171 PI4KAP1Q8N8J0 262 aa17.41■□□□□ 0.38
SHANK2-202ENST00000357171 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
SHANK2-202ENST00000357171 FLIIQ13045 1269 aa17.4■□□□□ 0.38
SHANK2-202ENST00000357171 MYD88Q99836 296 aa17.4■□□□□ 0.38
SHANK2-202ENST00000357171 ZC3H4Q9UPT8 1303 aaKnown RBP17.4■□□□□ 0.38
SHANK2-202ENST00000357171 MYH3P11055 1940 aa17.4■□□□□ 0.38
SHANK2-202ENST00000357171 IGKV5-2P06315 115 aa17.4■□□□□ 0.38
SHANK2-202ENST00000357171 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
SHANK2-202ENST00000357171 LMNB1P20700 586 aa17.4■□□□□ 0.38
SHANK2-202ENST00000357171 ZBTB38Q8NAP3 1195 aaPredicted RBP17.4■□□□□ 0.38
SHANK2-202ENST00000357171 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
SHANK2-202ENST00000357171 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
SHANK2-202ENST00000357171 RBM17Q96I25 401 aaKnown RBP17.4■□□□□ 0.38
SHANK2-202ENST00000357171 SF3B3Q15393 1217 aaKnown RBP17.39■□□□□ 0.37
SHANK2-202ENST00000357171 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
SHANK2-202ENST00000357171 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
SHANK2-202ENST00000357171 CCDC93Q567U6 631 aa17.38■□□□□ 0.37
SHANK2-202ENST00000357171 CC2D2BQ6DHV5 1058 aa17.38■□□□□ 0.37
SHANK2-202ENST00000357171 TAOK3Q9H2K8 898 aa17.38■□□□□ 0.37
SHANK2-202ENST00000357171 CWC25Q9NXE8 425 aaPredicted RBP17.38■□□□□ 0.37
SHANK2-202ENST00000357171 RNF181Q9P0P0 153 aa17.38■□□□□ 0.37
SHANK2-202ENST00000357171 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
SHANK2-202ENST00000357171 LRRC37AA6NMS7 1700 aa17.37■□□□□ 0.37
SHANK2-202ENST00000357171 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
SHANK2-202ENST00000357171 ABCC4O15439 1325 aa17.36■□□□□ 0.37
SHANK2-202ENST00000357171 NEURL1BA8MQ27 555 aa17.36■□□□□ 0.37
SHANK2-202ENST00000357171 IRS4O14654 1257 aaPredicted RBP17.36■□□□□ 0.37
SHANK2-202ENST00000357171 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
SHANK2-202ENST00000357171 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
SHANK2-202ENST00000357171 ZNF428Q96B54 188 aa17.36■□□□□ 0.37
SHANK2-202ENST00000357171 CDHR2Q9BYE9 1310 aa17.35■□□□□ 0.37
SHANK2-202ENST00000357171 COL4A1P02462 1669 aa17.35■□□□□ 0.37
SHANK2-202ENST00000357171 BBOX1O75936 387 aa17.35■□□□□ 0.37
SHANK2-202ENST00000357171 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHANK2-202ENST00000357171 NEXNQ0ZGT2 675 aa17.35■□□□□ 0.37
SHANK2-202ENST00000357171 FKBP5Q13451 457 aaPredicted RBP17.35■□□□□ 0.37
SHANK2-202ENST00000357171 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
SHANK2-202ENST00000357171 PSMD1Q99460 953 aa17.35■□□□□ 0.37
SHANK2-202ENST00000357171 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
SHANK2-202ENST00000357171 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
SHANK2-202ENST00000357171 LINS1Q8NG48 757 aa17.34■□□□□ 0.37
SHANK2-202ENST00000357171 GPBP1L1Q9HC44 474 aaPredicted RBP17.34■□□□□ 0.37
SHANK2-202ENST00000357171 ATP6V0A2Q9Y487 856 aa17.34■□□□□ 0.37
SHANK2-202ENST00000357171 GRAPQ13588 217 aa17.33■□□□□ 0.36
SHANK2-202ENST00000357171 CWF19L2Q2TBE0 894 aaKnown RBP17.33■□□□□ 0.36
SHANK2-202ENST00000357171 RTL5Q5HYW3 569 aaPredicted RBP17.33■□□□□ 0.36
SHANK2-202ENST00000357171 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
SHANK2-202ENST00000357171 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.36
SHANK2-202ENST00000357171 H7C1W4 665 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms