RNA–Protein interactions for RNA: ENST00000357089.8

UBXN11-202, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBXN11, Length 1,555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-202ENST00000357089 DDX19BQ9UMR2 479 aa18.51■□□□□ 0.55
UBXN11-202ENST00000357089 NFIXQ14938 502 aa18.51■□□□□ 0.55
UBXN11-202ENST00000357089 NLGN1Q8N2Q7 840 aa18.51■□□□□ 0.55
UBXN11-202ENST00000357089 C9orf78Q9NZ63 289 aaPredicted RBP18.51■□□□□ 0.55
UBXN11-202ENST00000357089 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
UBXN11-202ENST00000357089 PARP10Q53GL7 1025 aa18.5■□□□□ 0.55
UBXN11-202ENST00000357089 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
UBXN11-202ENST00000357089 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
UBXN11-202ENST00000357089 MEIS3Q99687 375 aa18.5■□□□□ 0.55
UBXN11-202ENST00000357089 ZBTB7BO15156 539 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-202ENST00000357089 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-202ENST00000357089 JARID2Q92833 1246 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-202ENST00000357089 USP44Q9H0E7 712 aa18.49■□□□□ 0.55
UBXN11-202ENST00000357089 GRM8O00222 908 aa18.48■□□□□ 0.55
UBXN11-202ENST00000357089 TM4SF1P30408 202 aa18.48■□□□□ 0.55
UBXN11-202ENST00000357089 PPP1R42Q7Z4L9 355 aa18.48■□□□□ 0.55
UBXN11-202ENST00000357089 SLC16A10Q8TF71 515 aa18.48■□□□□ 0.55
UBXN11-202ENST00000357089 TRMT112Q9UI30 125 aaKnown RBP18.48■□□□□ 0.55
UBXN11-202ENST00000357089 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
UBXN11-202ENST00000357089 NBPF7P0C2Y1 421 aaPredicted RBP18.47■□□□□ 0.55
UBXN11-202ENST00000357089 UTP14AQ9BVJ6 771 aaKnown RBP18.47■□□□□ 0.55
UBXN11-202ENST00000357089 ZBTB7AO95365 584 aa18.47■□□□□ 0.55
UBXN11-202ENST00000357089 UBE3BQ7Z3V4 1068 aa18.47■□□□□ 0.55
UBXN11-202ENST00000357089 NBPF5PQ86XG9 351 aaPredicted RBP18.47■□□□□ 0.55
UBXN11-202ENST00000357089 ZBTB38Q8NAP3 1195 aaPredicted RBP18.47■□□□□ 0.55
UBXN11-202ENST00000357089 FAM89AQ96GI7 184 aa18.47■□□□□ 0.55
UBXN11-202ENST00000357089 IBTKQ9P2D0 1353 aaPredicted RBP18.46■□□□□ 0.55
UBXN11-202ENST00000357089 H7C1W4 665 aa18.46■□□□□ 0.55
UBXN11-202ENST00000357089 NTSR2O95665 410 aa18.46■□□□□ 0.55
UBXN11-202ENST00000357089 PCCAP05165 728 aaPredicted RBP18.46■□□□□ 0.55
UBXN11-202ENST00000357089 GNAI3P08754 354 aa18.46■□□□□ 0.55
UBXN11-202ENST00000357089 MMP10P09238 476 aa18.46■□□□□ 0.55
UBXN11-202ENST00000357089 UBTFL1P0CB47 393 aaPredicted RBP18.46■□□□□ 0.55
UBXN11-202ENST00000357089 DDR1Q08345 913 aa18.46■□□□□ 0.55
UBXN11-202ENST00000357089 CHMP4BQ9H444 224 aaKnown RBP18.46■□□□□ 0.55
UBXN11-202ENST00000357089 CASZ1Q86V15 1759 aa18.46■□□□□ 0.55
UBXN11-202ENST00000357089 POLRMTO00411 1230 aaKnown RBP18.45■□□□□ 0.54
UBXN11-202ENST00000357089 NPHP1O15259 732 aa18.45■□□□□ 0.54
UBXN11-202ENST00000357089 GTF2E1P29083 439 aaPredicted RBP18.45■□□□□ 0.54
UBXN11-202ENST00000357089 NUTM1Q86Y26 1132 aa18.45■□□□□ 0.54
UBXN11-202ENST00000357089 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
UBXN11-202ENST00000357089 NYXQ9GZU5 481 aa18.45■□□□□ 0.54
UBXN11-202ENST00000357089 COL24A1Q17RW2 1714 aa18.45■□□□□ 0.54
UBXN11-202ENST00000357089 UTYO14607 1347 aa18.45■□□□□ 0.54
UBXN11-202ENST00000357089 SERPINB2P05120 415 aa18.44■□□□□ 0.54
UBXN11-202ENST00000357089 TPTE2Q6XPS3 522 aa18.44■□□□□ 0.54
UBXN11-202ENST00000357089 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
UBXN11-202ENST00000357089 PARP3Q9Y6F1 533 aa18.44■□□□□ 0.54
UBXN11-202ENST00000357089 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
UBXN11-202ENST00000357089 CASP7P55210 303 aa18.43■□□□□ 0.54
UBXN11-202ENST00000357089 MTFR1LQ9H019 292 aa18.43■□□□□ 0.54
UBXN11-202ENST00000357089 C1orf115Q9H7X2 142 aa18.43■□□□□ 0.54
UBXN11-202ENST00000357089 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
UBXN11-202ENST00000357089 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
UBXN11-202ENST00000357089 ERFEQ4G0M1 354 aa18.42■□□□□ 0.54
UBXN11-202ENST00000357089 CCDC24Q8N4L8 307 aa18.42■□□□□ 0.54
UBXN11-202ENST00000357089 CNBD1Q8NA66 436 aa18.42■□□□□ 0.54
UBXN11-202ENST00000357089 SUCLG2Q96I99 432 aa18.42■□□□□ 0.54
UBXN11-202ENST00000357089 GNAI2P04899 355 aa18.42■□□□□ 0.54
UBXN11-202ENST00000357089 LRRFIP2Q9Y608 721 aaKnown RBP18.42■□□□□ 0.54
UBXN11-202ENST00000357089 IRS4O14654 1257 aaPredicted RBP18.41■□□□□ 0.54
UBXN11-202ENST00000357089 CDHR2Q9BYE9 1310 aa18.41■□□□□ 0.54
UBXN11-202ENST00000357089 HCLS1P14317 486 aaPredicted RBP18.4■□□□□ 0.54
UBXN11-202ENST00000357089 YY1P25490 414 aa18.4■□□□□ 0.54
UBXN11-202ENST00000357089 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
UBXN11-202ENST00000357089 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
UBXN11-202ENST00000357089 ST5P78524 1137 aa18.39■□□□□ 0.53
UBXN11-202ENST00000357089 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
UBXN11-202ENST00000357089 ABCC12Q96J65 1359 aa18.39■□□□□ 0.53
UBXN11-202ENST00000357089 AAMPQ13685 434 aa18.38■□□□□ 0.53
UBXN11-202ENST00000357089 BICC1Q9H694 974 aaKnown RBP18.38■□□□□ 0.53
UBXN11-202ENST00000357089 POLD1P28340 1107 aa18.38■□□□□ 0.53
UBXN11-202ENST00000357089 EPHA10Q5JZY3 1008 aa18.38■□□□□ 0.53
UBXN11-202ENST00000357089 PDE8AO60658 829 aa18.37■□□□□ 0.53
UBXN11-202ENST00000357089 HSP90B1P14625 803 aaKnown RBP18.37■□□□□ 0.53
UBXN11-202ENST00000357089 FOXO4P98177 505 aa18.37■□□□□ 0.53
UBXN11-202ENST00000357089 SLC10A5Q5PT55 438 aa18.37■□□□□ 0.53
UBXN11-202ENST00000357089 NRXN2Q9P2S2 1712 aa18.36■□□□□ 0.53
UBXN11-202ENST00000357089 PLA2G12BQ9BX93 195 aa18.36■□□□□ 0.53
UBXN11-202ENST00000357089 PCDHB15Q9Y5E8 787 aa18.36■□□□□ 0.53
UBXN11-202ENST00000357089 CTSWP56202 376 aa18.35■□□□□ 0.53
UBXN11-202ENST00000357089 LMBR1LQ6UX01 489 aa18.35■□□□□ 0.53
UBXN11-202ENST00000357089 CCDC85AQ96PX6 553 aaPredicted RBP18.35■□□□□ 0.53
UBXN11-202ENST00000357089 DDX60Q8IY21 1712 aaKnown RBP18.35■□□□□ 0.53
UBXN11-202ENST00000357089 CEP85Q6P2H3 762 aa18.34■□□□□ 0.53
UBXN11-202ENST00000357089 ANKRD44Q8N8A2 993 aa18.34■□□□□ 0.53
UBXN11-202ENST00000357089 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
UBXN11-202ENST00000357089 CHMP3Q9Y3E7 222 aa18.34■□□□□ 0.53
UBXN11-202ENST00000357089 RABL6Q3YEC7 729 aaPredicted RBP18.34■□□□□ 0.53
UBXN11-202ENST00000357089 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
UBXN11-202ENST00000357089 C3orf67Q6ZVT6 689 aa18.34■□□□□ 0.53
UBXN11-202ENST00000357089 SGIP1Q9BQI5 828 aa18.34■□□□□ 0.53
UBXN11-202ENST00000357089 SPON1Q9HCB6 807 aa18.34■□□□□ 0.53
UBXN11-202ENST00000357089 LAMB2P55268 1798 aa18.33■□□□□ 0.53
UBXN11-202ENST00000357089 PTGER2P43116 358 aa18.33■□□□□ 0.52
UBXN11-202ENST00000357089 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.52
UBXN11-202ENST00000357089 TTLL11Q8NHH1 800 aa18.33■□□□□ 0.52
UBXN11-202ENST00000357089 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.52
UBXN11-202ENST00000357089 TNRC6CQ9HCJ0 1690 aaKnown RBP18.32■□□□□ 0.52
UBXN11-202ENST00000357089 PNMA6EA0A0J9YXQ4 647 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms