RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 RPGRQ92834 1020 aaKnown RBP22.16■■□□□ 1.14
NCL-202ENST00000356936 NFKBIEO00221 500 aa22.15■■□□□ 1.14
NCL-202ENST00000356936 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
NCL-202ENST00000356936 NLRP10Q86W26 655 aa22.15■■□□□ 1.14
NCL-202ENST00000356936 NLRP3Q96P20 1036 aa22.15■■□□□ 1.14
NCL-202ENST00000356936 LTBP3Q9NS15 1303 aa22.14■■□□□ 1.14
NCL-202ENST00000356936 SLC10A5Q5PT55 438 aa22.14■■□□□ 1.13
NCL-202ENST00000356936 TAOK3Q9H2K8 898 aa22.14■■□□□ 1.13
NCL-202ENST00000356936 SALL2Q9Y467 1007 aaPredicted RBP22.14■■□□□ 1.13
NCL-202ENST00000356936 ARFGEF2Q9Y6D5 1785 aa22.14■■□□□ 1.13
NCL-202ENST00000356936 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
NCL-202ENST00000356936 HOXA10P31260 410 aaPredicted RBP22.13■■□□□ 1.13
NCL-202ENST00000356936 CCDC93Q567U6 631 aa22.13■■□□□ 1.13
NCL-202ENST00000356936 C7orf43Q8WVR3 580 aa22.13■■□□□ 1.13
NCL-202ENST00000356936 RBM17Q96I25 401 aaKnown RBP22.13■■□□□ 1.13
NCL-202ENST00000356936 TRMT112Q9UI30 125 aaKnown RBP22.13■■□□□ 1.13
NCL-202ENST00000356936 DDX58O95786 925 aaKnown RBP22.12■■□□□ 1.13
NCL-202ENST00000356936 TWISTNBQ3B726 338 aaPredicted RBP22.12■■□□□ 1.13
NCL-202ENST00000356936 RIC3Q7Z5B4 369 aa22.12■■□□□ 1.13
NCL-202ENST00000356936 RTKN2Q8IZC4 609 aa22.12■■□□□ 1.13
NCL-202ENST00000356936 TSPYL6Q8N831 410 aa22.12■■□□□ 1.13
NCL-202ENST00000356936 STK31Q9BXU1 1019 aa22.12■■□□□ 1.13
NCL-202ENST00000356936 SLX4Q8IY92 1834 aa22.12■■□□□ 1.13
NCL-202ENST00000356936 ANKRD36CQ5JPF3 1778 aa22.12■■□□□ 1.13
NCL-202ENST00000356936 SH3TC1Q8TE82 1336 aa22.11■■□□□ 1.13
NCL-202ENST00000356936 TNRC6CQ9HCJ0 1690 aaKnown RBP22.11■■□□□ 1.13
NCL-202ENST00000356936 CRAMP1Q96RY5 1269 aa22.11■■□□□ 1.13
NCL-202ENST00000356936 SBF1O95248 1867 aa22.1■■□□□ 1.13
NCL-202ENST00000356936 TRIM28Q13263 835 aaKnown RBP22.1■■□□□ 1.13
NCL-202ENST00000356936 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
NCL-202ENST00000356936 PHAXQ9H814 394 aaKnown RBP22.1■■□□□ 1.13
NCL-202ENST00000356936 FANCIQ9NVI1 1328 aa22.09■■□□□ 1.13
NCL-202ENST00000356936 PRELPP51888 382 aa22.09■■□□□ 1.13
NCL-202ENST00000356936 GRIPAP1Q4V328 841 aa22.09■■□□□ 1.13
NCL-202ENST00000356936 CC2D2BQ6DHV5 1058 aa22.09■■□□□ 1.13
NCL-202ENST00000356936 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
NCL-202ENST00000356936 FER1L6Q2WGJ9 1857 aa22.08■■□□□ 1.13
NCL-202ENST00000356936 ATP5J2-PTCD1G3V325 749 aa22.07■■□□□ 1.12
NCL-202ENST00000356936 KIF3CO14782 793 aa22.07■■□□□ 1.12
NCL-202ENST00000356936 FKBP4Q02790 459 aaKnown RBP eCLIP22.07■■□□□ 1.12
NCL-202ENST00000356936 TMX4Q9H1E5 349 aaPredicted RBP22.07■■□□□ 1.12
NCL-202ENST00000356936 CACNA1SQ13698 1873 aa22.07■■□□□ 1.12
NCL-202ENST00000356936 DPY19L2Q6NUT2 758 aa22.06■■□□□ 1.12
NCL-202ENST00000356936 GLTPD2A6NH11 291 aa22.05■■□□□ 1.12
NCL-202ENST00000356936 HCLS1P14317 486 aaPredicted RBP22.05■■□□□ 1.12
NCL-202ENST00000356936 HSP90B1P14625 803 aaKnown RBP22.05■■□□□ 1.12
NCL-202ENST00000356936 C3orf67Q6ZVT6 689 aa22.05■■□□□ 1.12
NCL-202ENST00000356936 NMRK2Q9NPI5 230 aa22.05■■□□□ 1.12
NCL-202ENST00000356936 CCER2I3L3R5 266 aa22.04■■□□□ 1.12
NCL-202ENST00000356936 PPEF1O14829 653 aaPredicted RBP22.04■■□□□ 1.12
NCL-202ENST00000356936 TOMM70O94826 608 aa22.03■■□□□ 1.12
NCL-202ENST00000356936 SLC4A2P04920 1241 aa22.03■■□□□ 1.12
NCL-202ENST00000356936 KSR2Q6VAB6 950 aa22.03■■□□□ 1.12
NCL-202ENST00000356936 DDX46Q7L014 1031 aaKnown RBP22.03■■□□□ 1.12
NCL-202ENST00000356936 C16orf71Q8IYS4 520 aaPredicted RBP22.03■■□□□ 1.12
NCL-202ENST00000356936 SYNE4Q8N205 404 aa22.03■■□□□ 1.12
NCL-202ENST00000356936 ZBTB38Q8NAP3 1195 aaPredicted RBP22.03■■□□□ 1.12
NCL-202ENST00000356936 CCDC191Q8NCU4 936 aa22.03■■□□□ 1.12
NCL-202ENST00000356936 FAM89AQ96GI7 184 aa22.03■■□□□ 1.12
NCL-202ENST00000356936 PSMD1Q99460 953 aa22.03■■□□□ 1.12
NCL-202ENST00000356936 MYD88Q99836 296 aa22.03■■□□□ 1.12
NCL-202ENST00000356936 METTL22Q9BUU2 404 aaPredicted RBP22.03■■□□□ 1.12
NCL-202ENST00000356936 BBOX1O75936 387 aa22.02■■□□□ 1.12
NCL-202ENST00000356936 EXOSC9Q06265 439 aaKnown RBP22.02■■□□□ 1.12
NCL-202ENST00000356936 OLFM4Q6UX06 510 aa22.02■■□□□ 1.12
NCL-202ENST00000356936 MAP3K2Q9Y2U5 619 aa22.02■■□□□ 1.12
NCL-202ENST00000356936 TIAM2Q8IVF5 1701 aa22.02■■□□□ 1.12
NCL-202ENST00000356936 TCERG1O14776 1098 aaKnown RBP22.01■■□□□ 1.11
NCL-202ENST00000356936 VAMP4O75379 141 aa22.01■■□□□ 1.11
NCL-202ENST00000356936 NEXNQ0ZGT2 675 aa22.01■■□□□ 1.11
NCL-202ENST00000356936 ZNF277Q9NRM2 450 aaPredicted RBP22.01■■□□□ 1.11
NCL-202ENST00000356936 ABCC4O15439 1325 aa22.01■■□□□ 1.11
NCL-202ENST00000356936 PI4KAP2A4QPH2 592 aa22■■□□□ 1.11
NCL-202ENST00000356936 PI4KAP1Q8N8J0 262 aa22■■□□□ 1.11
NCL-202ENST00000356936 RRAGCQ9HB90 399 aa22■■□□□ 1.11
NCL-202ENST00000356936 CWC25Q9NXE8 425 aaPredicted RBP22■■□□□ 1.11
NCL-202ENST00000356936 ATP6V0A2Q9Y487 856 aa22■■□□□ 1.11
NCL-202ENST00000356936 IRS4O14654 1257 aaPredicted RBP21.99■■□□□ 1.11
NCL-202ENST00000356936 IARSP41252 1262 aaKnown RBP21.99■■□□□ 1.11
NCL-202ENST00000356936 SF3B3Q15393 1217 aaKnown RBP21.99■■□□□ 1.11
NCL-202ENST00000356936 TMC4Q7Z404 712 aa21.99■■□□□ 1.11
NCL-202ENST00000356936 ZNF428Q96B54 188 aa21.99■■□□□ 1.11
NCL-202ENST00000356936 SPINK5Q9NQ38 1064 aaPredicted RBP21.99■■□□□ 1.11
NCL-202ENST00000356936 ZNF521Q96K83 1311 aa21.99■■□□□ 1.11
NCL-202ENST00000356936 PCCAP05165 728 aaPredicted RBP21.98■■□□□ 1.11
NCL-202ENST00000356936 VEGFAP15692 232 aaPredicted RBP21.98■■□□□ 1.11
NCL-202ENST00000356936 GRAPQ13588 217 aa21.98■■□□□ 1.11
NCL-202ENST00000356936 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
NCL-202ENST00000356936 GRAPLQ8TC17 118 aaPredicted RBP21.98■■□□□ 1.11
NCL-202ENST00000356936 CCDC88AQ3V6T2 1871 aa21.98■■□□□ 1.11
NCL-202ENST00000356936 SNED1Q8TER0 1413 aa21.97■■□□□ 1.11
NCL-202ENST00000356936 FLIIQ13045 1269 aa21.97■■□□□ 1.11
NCL-202ENST00000356936 SP8Q8IXZ3 490 aa21.97■■□□□ 1.11
NCL-202ENST00000356936 RBM46Q8TBY0 533 aaKnown RBP21.97■■□□□ 1.11
NCL-202ENST00000356936 DICER1Q9UPY3 1922 aaKnown RBP21.97■■□□□ 1.11
NCL-202ENST00000356936 FKBP5Q13451 457 aaPredicted RBP21.96■■□□□ 1.11
NCL-202ENST00000356936 G2E3Q7L622 706 aa21.96■■□□□ 1.11
NCL-202ENST00000356936 JDP2Q8WYK2 163 aa21.96■■□□□ 1.11
NCL-202ENST00000356936 SUPT20HQ8NEM7 779 aa21.95■■□□□ 1.1
NCL-202ENST00000356936 VPS33BQ9H267 617 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms