RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ALDH1L1O75891 902 aa20.27■□□□□ 0.84
FDPS-201ENST00000356657 GPTP24298 496 aa20.27■□□□□ 0.84
FDPS-201ENST00000356657 ST5P78524 1137 aa20.27■□□□□ 0.84
FDPS-201ENST00000356657 UTP14AQ9BVJ6 771 aaKnown RBP20.27■□□□□ 0.84
FDPS-201ENST00000356657 CWC25Q9NXE8 425 aaPredicted RBP20.27■□□□□ 0.84
FDPS-201ENST00000356657 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
FDPS-201ENST00000356657 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
FDPS-201ENST00000356657 SYT17Q9BSW7 474 aa20.26■□□□□ 0.83
FDPS-201ENST00000356657 SRCIN1Q9C0H9 1055 aa20.26■□□□□ 0.83
FDPS-201ENST00000356657 LAMB2P55268 1798 aa20.26■□□□□ 0.83
FDPS-201ENST00000356657 ABCC4O15439 1325 aa20.25■□□□□ 0.83
FDPS-201ENST00000356657 NEURL1BA8MQ27 555 aa20.25■□□□□ 0.83
FDPS-201ENST00000356657 BEND3Q5T5X7 828 aa20.25■□□□□ 0.83
FDPS-201ENST00000356657 FRAT1Q92837 279 aaPredicted RBP20.25■□□□□ 0.83
FDPS-201ENST00000356657 CD2APQ9Y5K6 639 aa20.25■□□□□ 0.83
FDPS-201ENST00000356657 SH3TC1Q8TE82 1336 aa20.25■□□□□ 0.83
FDPS-201ENST00000356657 F6X3S4 739 aa20.24■□□□□ 0.83
FDPS-201ENST00000356657 NTSR2O95665 410 aa20.24■□□□□ 0.83
FDPS-201ENST00000356657 IGKV5-2P06315 115 aa20.24■□□□□ 0.83
FDPS-201ENST00000356657 TRIM27P14373 513 aa20.24■□□□□ 0.83
FDPS-201ENST00000356657 GTF2E1P29083 439 aaPredicted RBP20.24■□□□□ 0.83
FDPS-201ENST00000356657 PRR5LQ6MZQ0 368 aa20.24■□□□□ 0.83
FDPS-201ENST00000356657 ATP5J2-PTCD1G3V325 749 aa20.24■□□□□ 0.83
FDPS-201ENST00000356657 SUSD4Q5VX71 490 aa20.24■□□□□ 0.83
FDPS-201ENST00000356657 SLC4A10Q6U841 1118 aa20.24■□□□□ 0.83
FDPS-201ENST00000356657 ZBTB38Q8NAP3 1195 aaPredicted RBP20.24■□□□□ 0.83
FDPS-201ENST00000356657 TRMT112Q9UI30 125 aaKnown RBP20.24■□□□□ 0.83
FDPS-201ENST00000356657 PCCAP05165 728 aaPredicted RBP20.23■□□□□ 0.83
FDPS-201ENST00000356657 GCKRQ14397 625 aa20.23■□□□□ 0.83
FDPS-201ENST00000356657 BRIP1Q9BX63 1249 aa20.23■□□□□ 0.83
FDPS-201ENST00000356657 FTSJ3Q8IY81 847 aaKnown RBP20.22■□□□□ 0.83
FDPS-201ENST00000356657 ANKRD31Q8N7Z5 1873 aa20.21■□□□□ 0.83
FDPS-201ENST00000356657 CDHR2Q9BYE9 1310 aa20.21■□□□□ 0.83
FDPS-201ENST00000356657 MYH3P11055 1940 aa20.21■□□□□ 0.83
FDPS-201ENST00000356657 PDE6BP35913 854 aa20.21■□□□□ 0.83
FDPS-201ENST00000356657 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
FDPS-201ENST00000356657 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
FDPS-201ENST00000356657 INTS3Q68E01 1043 aaKnown RBP20.21■□□□□ 0.83
FDPS-201ENST00000356657 TGFB2P61812 414 aa20.2■□□□□ 0.82
FDPS-201ENST00000356657 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
FDPS-201ENST00000356657 DLEC1Q9Y238 1755 aa20.2■□□□□ 0.82
FDPS-201ENST00000356657 DZIP1LQ8IYY4 767 aaKnown RBP20.19■□□□□ 0.82
FDPS-201ENST00000356657 DDX60Q8IY21 1712 aaKnown RBP20.19■□□□□ 0.82
FDPS-201ENST00000356657 GRM8O00222 908 aa20.18■□□□□ 0.82
FDPS-201ENST00000356657 PDE3AQ14432 1141 aa20.18■□□□□ 0.82
FDPS-201ENST00000356657 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
FDPS-201ENST00000356657 KLRG2A4D1S0 409 aaPredicted RBP20.18■□□□□ 0.82
FDPS-201ENST00000356657 FAM177BA6PVY3 158 aa20.18■□□□□ 0.82
FDPS-201ENST00000356657 H7C1W4 665 aa20.18■□□□□ 0.82
FDPS-201ENST00000356657 C9orf78Q9NZ63 289 aaPredicted RBP20.18■□□□□ 0.82
FDPS-201ENST00000356657 UTYO14607 1347 aa20.17■□□□□ 0.82
FDPS-201ENST00000356657 ABCC12Q96J65 1359 aa20.17■□□□□ 0.82
FDPS-201ENST00000356657 ERFEQ4G0M1 354 aa20.17■□□□□ 0.82
FDPS-201ENST00000356657 NUTM1Q86Y26 1132 aa20.17■□□□□ 0.82
FDPS-201ENST00000356657 NLGN2Q8NFZ4 835 aa20.17■□□□□ 0.82
FDPS-201ENST00000356657 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
FDPS-201ENST00000356657 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
FDPS-201ENST00000356657 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
FDPS-201ENST00000356657 PLA2G12BQ9BX93 195 aa20.16■□□□□ 0.82
FDPS-201ENST00000356657 CHMP4BQ9H444 224 aaKnown RBP20.16■□□□□ 0.82
FDPS-201ENST00000356657 TNRC6CQ9HCJ0 1690 aaKnown RBP20.15■□□□□ 0.82
FDPS-201ENST00000356657 IRS4O14654 1257 aaPredicted RBP20.15■□□□□ 0.82
FDPS-201ENST00000356657 CRY2Q49AN0 593 aa20.15■□□□□ 0.82
FDPS-201ENST00000356657 UBE3BQ7Z3V4 1068 aa20.15■□□□□ 0.82
FDPS-201ENST00000356657 BRCA1P38398 1863 aaKnown RBP20.14■□□□□ 0.82
FDPS-201ENST00000356657 H0YIN7 160 aa20.14■□□□□ 0.81
FDPS-201ENST00000356657 PDE8AO60658 829 aa20.14■□□□□ 0.81
FDPS-201ENST00000356657 RRP1P56182 461 aaKnown RBP20.14■□□□□ 0.81
FDPS-201ENST00000356657 CLUAP1Q96AJ1 413 aa20.14■□□□□ 0.81
FDPS-201ENST00000356657 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
FDPS-201ENST00000356657 GNAI3P08754 354 aa20.13■□□□□ 0.81
FDPS-201ENST00000356657 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
FDPS-201ENST00000356657 GPR162Q16538 588 aa20.13■□□□□ 0.81
FDPS-201ENST00000356657 CASP7P55210 303 aa20.12■□□□□ 0.81
FDPS-201ENST00000356657 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
FDPS-201ENST00000356657 NPR1P16066 1061 aa20.11■□□□□ 0.81
FDPS-201ENST00000356657 SF3B3Q15393 1217 aaKnown RBP20.11■□□□□ 0.81
FDPS-201ENST00000356657 TMEM57Q8N5G2 664 aa20.11■□□□□ 0.81
FDPS-201ENST00000356657 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
FDPS-201ENST00000356657 SRGNP10124 158 aa20.11■□□□□ 0.81
FDPS-201ENST00000356657 HOXA10P31260 410 aaPredicted RBP20.11■□□□□ 0.81
FDPS-201ENST00000356657 STYK1Q6J9G0 422 aa20.11■□□□□ 0.81
FDPS-201ENST00000356657 MASTLQ96GX5 879 aa20.11■□□□□ 0.81
FDPS-201ENST00000356657 DDX19BQ9UMR2 479 aa20.11■□□□□ 0.81
FDPS-201ENST00000356657 RTL9Q8NET4 1388 aa20.1■□□□□ 0.81
FDPS-201ENST00000356657 HCLS1P14317 486 aaPredicted RBP20.1■□□□□ 0.81
FDPS-201ENST00000356657 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
FDPS-201ENST00000356657 CCDC152Q4G0S7 254 aa20.1■□□□□ 0.81
FDPS-201ENST00000356657 C2CD5Q86YS7 1000 aa20.1■□□□□ 0.81
FDPS-201ENST00000356657 ITPRIPQ8IWB1 547 aa20.1■□□□□ 0.81
FDPS-201ENST00000356657 RPGRQ92834 1020 aaKnown RBP20.1■□□□□ 0.81
FDPS-201ENST00000356657 NBPF7P0C2Y1 421 aaPredicted RBP20.09■□□□□ 0.81
FDPS-201ENST00000356657 RLBP1P12271 317 aa20.09■□□□□ 0.81
FDPS-201ENST00000356657 ALDH1B1P30837 517 aa20.09■□□□□ 0.81
FDPS-201ENST00000356657 CTSWP56202 376 aa20.09■□□□□ 0.81
FDPS-201ENST00000356657 RTL5Q5HYW3 569 aaPredicted RBP20.09■□□□□ 0.81
FDPS-201ENST00000356657 CNKSR1Q969H4 720 aa20.09■□□□□ 0.81
FDPS-201ENST00000356657 PLIN1O60240 522 aa20.08■□□□□ 0.81
FDPS-201ENST00000356657 SYNE4Q8N205 404 aa20.08■□□□□ 0.81
FDPS-201ENST00000356657 CCDC24Q8N4L8 307 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms