RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 NBPF5PQ86XG9 351 aaPredicted RBP16.47■□□□□ 0.23
ATN1-201ENST00000356654 SLC52A2Q9HAB3 445 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 CCDC144CPQ8IYA2 1237 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 AK7Q96M32 723 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 TSPOAP1O95153 1857 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 C6orf229H3BNL8 230 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 FAM13BQ9NYF5 915 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
ATN1-201ENST00000356654 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
ATN1-201ENST00000356654 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
ATN1-201ENST00000356654 MKNK2Q9HBH9 465 aa16.46■□□□□ 0.23
ATN1-201ENST00000356654 KDM5AP29375 1690 aaKnown RBP16.46■□□□□ 0.23
ATN1-201ENST00000356654 POLR3DP05423 398 aaPredicted RBP16.46■□□□□ 0.23
ATN1-201ENST00000356654 RFC4P35249 363 aa16.46■□□□□ 0.23
ATN1-201ENST00000356654 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
ATN1-201ENST00000356654 PLEKHG1Q9ULL1 1385 aa16.45■□□□□ 0.22
ATN1-201ENST00000356654 HOXB7P09629 217 aa16.45■□□□□ 0.22
ATN1-201ENST00000356654 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
ATN1-201ENST00000356654 TXLNAP40222 546 aa16.45■□□□□ 0.22
ATN1-201ENST00000356654 SLC4A8Q2Y0W8 1093 aa16.45■□□□□ 0.22
ATN1-201ENST00000356654 CCDC43Q96MW1 224 aaKnown RBP16.45■□□□□ 0.22
ATN1-201ENST00000356654 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
ATN1-201ENST00000356654 CCDC152Q4G0S7 254 aa16.45■□□□□ 0.22
ATN1-201ENST00000356654 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.45■□□□□ 0.22
ATN1-201ENST00000356654 USP26Q9BXU7 913 aa16.45■□□□□ 0.22
ATN1-201ENST00000356654 SCAND2PQ9GZW5 306 aaPredicted RBP16.45■□□□□ 0.22
ATN1-201ENST00000356654 ABCC3O15438 1527 aa16.45■□□□□ 0.22
ATN1-201ENST00000356654 IRS4O14654 1257 aaPredicted RBP16.45■□□□□ 0.22
ATN1-201ENST00000356654 PDIA4P13667 645 aaKnown RBP16.45■□□□□ 0.22
ATN1-201ENST00000356654 SOGA3Q5TF21 947 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 MICU3Q86XE3 530 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 METTL22Q9BUU2 404 aaPredicted RBP16.44■□□□□ 0.22
ATN1-201ENST00000356654 SLC12A7Q9Y666 1083 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 TTF1Q15361 905 aaPredicted RBP16.44■□□□□ 0.22
ATN1-201ENST00000356654 MCMDC2Q4G0Z9 681 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 NOC3LQ8WTT2 800 aaKnown RBP16.44■□□□□ 0.22
ATN1-201ENST00000356654 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 SLC9C2Q5TAH2 1124 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 HECW2Q9P2P5 1572 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 TTC41PQ6P2S7 1318 aa16.44■□□□□ 0.22
ATN1-201ENST00000356654 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 CPA1P15085 419 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 HMGN5P82970 282 aaKnown RBP16.43■□□□□ 0.22
ATN1-201ENST00000356654 ZGPATQ8N5A5 531 aaKnown RBP16.43■□□□□ 0.22
ATN1-201ENST00000356654 ARHGEF10O15013 1369 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 SNX21Q969T3 373 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 HMG20BQ9P0W2 317 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
ATN1-201ENST00000356654 GIGYF1O75420 1035 aaPredicted RBP16.43■□□□□ 0.22
ATN1-201ENST00000356654 ANAPC15P60006 121 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 CKAP2LQ8IYA6 745 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 PAG1Q9NWQ8 432 aa16.43■□□□□ 0.22
ATN1-201ENST00000356654 HSP90AA2PQ14568 343 aaPredicted RBP16.42■□□□□ 0.22
ATN1-201ENST00000356654 IQCA1Q86XH1 822 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 CDK5RAP3Q96JB5 506 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 SETDB2Q96T68 719 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
ATN1-201ENST00000356654 NOL7Q9UMY1 257 aaKnown RBP16.42■□□□□ 0.22
ATN1-201ENST00000356654 GOLGA8AA7E2F4 631 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 SERPINC1P01008 464 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 PRIM1P49642 420 aaKnown RBP16.42■□□□□ 0.22
ATN1-201ENST00000356654 PLBD2Q8NHP8 589 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 UQCRFS1P1P0C7P4 283 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 FILIP1Q7Z7B0 1213 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 WASF1Q92558 559 aa16.42■□□□□ 0.22
ATN1-201ENST00000356654 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
ATN1-201ENST00000356654 TMEM67Q5HYA8 995 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
ATN1-201ENST00000356654 NLRP3Q96P20 1036 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 TMEM94Q12767 1356 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 AATKQ6ZMQ8 1374 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 DBNDD2Q9BQY9 259 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 FAM135BQ49AJ0 1406 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 ABCC4O15439 1325 aa16.41■□□□□ 0.22
ATN1-201ENST00000356654 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
ATN1-201ENST00000356654 NCOA7Q8NI08 942 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 NDUFB9Q9Y6M9 179 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
ATN1-201ENST00000356654 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 GCKRQ14397 625 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 RNF41Q9H4P4 317 aaPredicted RBP16.4■□□□□ 0.22
ATN1-201ENST00000356654 ESPNB1AK53 854 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 TTLL5Q6EMB2 1281 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 CEP57L1Q8IYX8 460 aa16.4■□□□□ 0.22
ATN1-201ENST00000356654 ZNF444Q8N0Y2 327 aaPredicted RBP16.4■□□□□ 0.22
ATN1-201ENST00000356654 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
ATN1-201ENST00000356654 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
ATN1-201ENST00000356654 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
ATN1-201ENST00000356654 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
ATN1-201ENST00000356654 MPHOSPH10O00566 681 aaKnown RBP16.39■□□□□ 0.21
ATN1-201ENST00000356654 CYP7A1P22680 504 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms