RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 DIEXFQ68CQ4 756 aaKnown RBP26.23■■□□□ 1.79
CHRD-203ENST00000356534 ABCC12Q96J65 1359 aa26.22■■□□□ 1.79
CHRD-203ENST00000356534 SOGA3Q5TF21 947 aa26.22■■□□□ 1.79
CHRD-203ENST00000356534 TSPYL6Q8N831 410 aa26.22■■□□□ 1.79
CHRD-203ENST00000356534 ZNF784Q8NCA9 323 aaPredicted RBP26.22■■□□□ 1.79
CHRD-203ENST00000356534 UTP14AQ9BVJ6 771 aaKnown RBP26.22■■□□□ 1.79
CHRD-203ENST00000356534 NUTM1Q86Y26 1132 aa26.21■■□□□ 1.79
CHRD-203ENST00000356534 TIAM2Q8IVF5 1701 aa26.2■■□□□ 1.79
CHRD-203ENST00000356534 DDX60Q8IY21 1712 aaKnown RBP26.2■■□□□ 1.79
CHRD-203ENST00000356534 ERFEQ4G0M1 354 aa26.19■■□□□ 1.78
CHRD-203ENST00000356534 RIC3Q7Z5B4 369 aa26.19■■□□□ 1.78
CHRD-203ENST00000356534 NLRP10Q86W26 655 aa26.19■■□□□ 1.78
CHRD-203ENST00000356534 ZNF521Q96K83 1311 aa26.18■■□□□ 1.78
CHRD-203ENST00000356534 ALDH1B1P30837 517 aa26.18■■□□□ 1.78
CHRD-203ENST00000356534 CRY2Q49AN0 593 aa26.18■■□□□ 1.78
CHRD-203ENST00000356534 MYH3P11055 1940 aa26.18■■□□□ 1.78
CHRD-203ENST00000356534 PRPF40BQ6NWY9 871 aaKnown RBP26.17■■□□□ 1.78
CHRD-203ENST00000356534 PHAXQ9H814 394 aaKnown RBP26.17■■□□□ 1.78
CHRD-203ENST00000356534 SH3TC1Q8TE82 1336 aa26.16■■□□□ 1.78
CHRD-203ENST00000356534 RPGRQ92834 1020 aaKnown RBP26.16■■□□□ 1.78
CHRD-203ENST00000356534 NLRP3Q96P20 1036 aa26.16■■□□□ 1.78
CHRD-203ENST00000356534 TRMT112Q9UI30 125 aaKnown RBP26.16■■□□□ 1.78
CHRD-203ENST00000356534 TRIM28Q13263 835 aaKnown RBP26.15■■□□□ 1.78
CHRD-203ENST00000356534 ISCA1Q9BUE6 129 aa26.15■■□□□ 1.78
CHRD-203ENST00000356534 EXOSC9Q06265 439 aaKnown RBP26.14■■□□□ 1.78
CHRD-203ENST00000356534 SLC10A5Q5PT55 438 aa26.14■■□□□ 1.78
CHRD-203ENST00000356534 E9PSI1 815 aa26.13■■□□□ 1.77
CHRD-203ENST00000356534 C21orf2O43822 256 aa26.13■■□□□ 1.77
CHRD-203ENST00000356534 LTBP3Q9NS15 1303 aa26.13■■□□□ 1.77
CHRD-203ENST00000356534 ZC3H4Q9UPT8 1303 aaKnown RBP26.13■■□□□ 1.77
CHRD-203ENST00000356534 HSP90B1P14625 803 aaKnown RBP26.12■■□□□ 1.77
CHRD-203ENST00000356534 C9orf131Q5VYM1 1079 aa26.12■■□□□ 1.77
CHRD-203ENST00000356534 RBM17Q96I25 401 aaKnown RBP26.12■■□□□ 1.77
CHRD-203ENST00000356534 VAMP4O75379 141 aa26.11■■□□□ 1.77
CHRD-203ENST00000356534 LMNB1P20700 586 aa26.11■■□□□ 1.77
CHRD-203ENST00000356534 HOXA10P31260 410 aaPredicted RBP26.11■■□□□ 1.77
CHRD-203ENST00000356534 CCDC93Q567U6 631 aa26.11■■□□□ 1.77
CHRD-203ENST00000356534 SPINK5Q9NQ38 1064 aaPredicted RBP26.11■■□□□ 1.77
CHRD-203ENST00000356534 RNF181Q9P0P0 153 aa26.11■■□□□ 1.77
CHRD-203ENST00000356534 SLC4A2P04920 1241 aa26.1■■□□□ 1.77
CHRD-203ENST00000356534 NEXNQ0ZGT2 675 aa26.1■■□□□ 1.77
CHRD-203ENST00000356534 KSR2Q6VAB6 950 aa26.1■■□□□ 1.77
CHRD-203ENST00000356534 CCDC191Q8NCU4 936 aa26.1■■□□□ 1.77
CHRD-203ENST00000356534 CRAMP1Q96RY5 1269 aa26.1■■□□□ 1.77
CHRD-203ENST00000356534 METTL22Q9BUU2 404 aaPredicted RBP26.1■■□□□ 1.77
CHRD-203ENST00000356534 ATP5J2-PTCD1G3V325 749 aa26.09■■□□□ 1.77
CHRD-203ENST00000356534 RASSF7Q02833 373 aa26.09■■□□□ 1.77
CHRD-203ENST00000356534 TAOK3Q9H2K8 898 aa26.09■■□□□ 1.77
CHRD-203ENST00000356534 ZNF219Q9P2Y4 722 aaPredicted RBP26.09■■□□□ 1.77
CHRD-203ENST00000356534 CC2D2BQ6DHV5 1058 aa26.08■■□□□ 1.77
CHRD-203ENST00000356534 MYD88Q99836 296 aa26.08■■□□□ 1.77
CHRD-203ENST00000356534 GPBP1L1Q9HC44 474 aaPredicted RBP26.08■■□□□ 1.77
CHRD-203ENST00000356534 MAP3K2Q9Y2U5 619 aa26.08■■□□□ 1.77
CHRD-203ENST00000356534 NFKBIEO00221 500 aa26.07■■□□□ 1.76
CHRD-203ENST00000356534 FLIIQ13045 1269 aa26.07■■□□□ 1.76
CHRD-203ENST00000356534 GRIPAP1Q4V328 841 aa26.07■■□□□ 1.76
CHRD-203ENST00000356534 TAF1P21675 1872 aa26.06■■□□□ 1.76
CHRD-203ENST00000356534 PI4KAP2A4QPH2 592 aa26.06■■□□□ 1.76
CHRD-203ENST00000356534 TCERG1O14776 1098 aaKnown RBP26.06■■□□□ 1.76
CHRD-203ENST00000356534 RTKN2Q8IZC4 609 aa26.06■■□□□ 1.76
CHRD-203ENST00000356534 PI4KAP1Q8N8J0 262 aa26.06■■□□□ 1.76
CHRD-203ENST00000356534 C7orf43Q8WVR3 580 aa26.06■■□□□ 1.76
CHRD-203ENST00000356534 CWC25Q9NXE8 425 aaPredicted RBP26.06■■□□□ 1.76
CHRD-203ENST00000356534 FKBP5Q13451 457 aaPredicted RBP26.05■■□□□ 1.76
CHRD-203ENST00000356534 ZBTB38Q8NAP3 1195 aaPredicted RBP26.05■■□□□ 1.76
CHRD-203ENST00000356534 TMX4Q9H1E5 349 aaPredicted RBP26.05■■□□□ 1.76
CHRD-203ENST00000356534 HCLS1P14317 486 aaPredicted RBP26.04■■□□□ 1.76
CHRD-203ENST00000356534 MIER1Q8N108 512 aa26.04■■□□□ 1.76
CHRD-203ENST00000356534 LRRC37AA6NMS7 1700 aa26.03■■□□□ 1.76
CHRD-203ENST00000356534 DDX46Q7L014 1031 aaKnown RBP26.03■■□□□ 1.76
CHRD-203ENST00000356534 FAM89AQ96GI7 184 aa26.03■■□□□ 1.76
CHRD-203ENST00000356534 PPEF1O14829 653 aaPredicted RBP26.02■■□□□ 1.76
CHRD-203ENST00000356534 PCCAP05165 728 aaPredicted RBP26.02■■□□□ 1.76
CHRD-203ENST00000356534 FKBP4Q02790 459 aaKnown RBP eCLIP26.02■■□□□ 1.76
CHRD-203ENST00000356534 SLFN5Q08AF3 891 aa26.02■■□□□ 1.76
CHRD-203ENST00000356534 G2E3Q7L622 706 aa26.02■■□□□ 1.76
CHRD-203ENST00000356534 ZNF428Q96B54 188 aa26.02■■□□□ 1.76
CHRD-203ENST00000356534 IRS4O14654 1257 aaPredicted RBP26.01■■□□□ 1.75
CHRD-203ENST00000356534 ABCC4O15439 1325 aa26.01■■□□□ 1.75
CHRD-203ENST00000356534 C3orf67Q6ZVT6 689 aa26.01■■□□□ 1.75
CHRD-203ENST00000356534 KDM2BQ8NHM5 1336 aa26.01■■□□□ 1.75
CHRD-203ENST00000356534 TMC4Q7Z404 712 aa26■■□□□ 1.75
CHRD-203ENST00000356534 ZNF526Q8TF50 670 aaPredicted RBP26■■□□□ 1.75
CHRD-203ENST00000356534 DNAAF4Q8WXU2 420 aa26■■□□□ 1.75
CHRD-203ENST00000356534 CDHR2Q9BYE9 1310 aa25.99■■□□□ 1.75
CHRD-203ENST00000356534 SF3B3Q15393 1217 aaKnown RBP25.99■■□□□ 1.75
CHRD-203ENST00000356534 SYNE4Q8N205 404 aa25.99■■□□□ 1.75
CHRD-203ENST00000356534 SNED1Q8TER0 1413 aa25.98■■□□□ 1.75
CHRD-203ENST00000356534 BBOX1O75936 387 aa25.98■■□□□ 1.75
CHRD-203ENST00000356534 GRAPQ13588 217 aa25.98■■□□□ 1.75
CHRD-203ENST00000356534 GRAPLQ8TC17 118 aaPredicted RBP25.98■■□□□ 1.75
CHRD-203ENST00000356534 PSMD1Q99460 953 aa25.98■■□□□ 1.75
CHRD-203ENST00000356534 NEURL1BA8MQ27 555 aa25.96■■□□□ 1.75
CHRD-203ENST00000356534 PDE8AO60658 829 aa25.96■■□□□ 1.75
CHRD-203ENST00000356534 IGKV5-2P06315 115 aa25.96■■□□□ 1.75
CHRD-203ENST00000356534 CT47B1P0C2W7 299 aaPredicted RBP25.96■■□□□ 1.75
CHRD-203ENST00000356534 RTL5Q5HYW3 569 aaPredicted RBP25.96■■□□□ 1.75
CHRD-203ENST00000356534 PRELPP51888 382 aa25.95■■□□□ 1.74
CHRD-203ENST00000356534 LINS1Q8NG48 757 aa25.95■■□□□ 1.74
CHRD-203ENST00000356534 ATP6V0A2Q9Y487 856 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms