RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 TOGARAM1Q9Y4F4 1720 aa21.48■■□□□ 1.03
NPAS3-202ENST00000356141 REC8O95072 547 aa21.48■■□□□ 1.03
NPAS3-202ENST00000356141 MTX1Q13505 466 aa21.48■■□□□ 1.03
NPAS3-202ENST00000356141 LRRC24Q50LG9 513 aa21.48■■□□□ 1.03
NPAS3-202ENST00000356141 DNAJC2Q99543 621 aaKnown RBP21.48■■□□□ 1.03
NPAS3-202ENST00000356141 PUS3Q9BZE2 481 aaKnown RBP21.48■■□□□ 1.03
NPAS3-202ENST00000356141 HSP90AB4PQ58FF6 505 aa21.47■■□□□ 1.03
NPAS3-202ENST00000356141 SHANK3Q9BYB0 1731 aa21.47■■□□□ 1.03
NPAS3-202ENST00000356141 CPA1P15085 419 aa21.47■■□□□ 1.03
NPAS3-202ENST00000356141 TIMM10P62072 90 aa21.47■■□□□ 1.03
NPAS3-202ENST00000356141 ECHDC1Q9NTX5 307 aa21.47■■□□□ 1.03
NPAS3-202ENST00000356141 NEK4P51957 841 aa21.46■■□□□ 1.03
NPAS3-202ENST00000356141 FAM227BQ96M60 508 aa21.46■■□□□ 1.03
NPAS3-202ENST00000356141 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.03
NPAS3-202ENST00000356141 LTBP4Q8N2S1 1624 aa21.45■■□□□ 1.02
NPAS3-202ENST00000356141 STARD3NLO95772 234 aa21.45■■□□□ 1.02
NPAS3-202ENST00000356141 KIF6Q6ZMV9 814 aa21.45■■□□□ 1.02
NPAS3-202ENST00000356141 DBNDD2Q9BQY9 259 aa21.45■■□□□ 1.02
NPAS3-202ENST00000356141 HOMEZQ8IX15 550 aa21.45■■□□□ 1.02
NPAS3-202ENST00000356141 CNTROBQ8N137 903 aa21.45■■□□□ 1.02
NPAS3-202ENST00000356141 GLI3P10071 1580 aa21.45■■□□□ 1.02
NPAS3-202ENST00000356141 UTYO14607 1347 aa21.45■■□□□ 1.02
NPAS3-202ENST00000356141 ATP6V1AP38606 617 aa21.44■■□□□ 1.02
NPAS3-202ENST00000356141 FOXO4P98177 505 aa21.44■■□□□ 1.02
NPAS3-202ENST00000356141 CERKQ8TCT0 537 aa21.44■■□□□ 1.02
NPAS3-202ENST00000356141 DIAPH3Q9NSV4 1193 aa21.44■■□□□ 1.02
NPAS3-202ENST00000356141 COL16A1Q07092 1604 aaPredicted RBP21.44■■□□□ 1.02
NPAS3-202ENST00000356141 ABCC6O95255 1503 aa21.44■■□□□ 1.02
NPAS3-202ENST00000356141 K7ELQ4 463 aaPredicted RBP21.44■■□□□ 1.02
NPAS3-202ENST00000356141 DHX37Q8IY37 1157 aaKnown RBP21.44■■□□□ 1.02
NPAS3-202ENST00000356141 GZF1Q9H116 711 aaPredicted RBP21.44■■□□□ 1.02
NPAS3-202ENST00000356141 RFX5P48382 616 aaPredicted RBP21.43■■□□□ 1.02
NPAS3-202ENST00000356141 CASP7P55210 303 aa21.43■■□□□ 1.02
NPAS3-202ENST00000356141 PHLPP1O60346 1717 aa21.43■■□□□ 1.02
NPAS3-202ENST00000356141 CHAMP1Q96JM3 812 aa21.43■■□□□ 1.02
NPAS3-202ENST00000356141 DBNLQ9UJU6 430 aaKnown RBP21.43■■□□□ 1.02
NPAS3-202ENST00000356141 AFDNP55196 1824 aaKnown RBP21.43■■□□□ 1.02
NPAS3-202ENST00000356141 ZGPATQ8N5A5 531 aaKnown RBP21.42■■□□□ 1.02
NPAS3-202ENST00000356141 GLRX3O76003 335 aaKnown RBP21.42■■□□□ 1.02
NPAS3-202ENST00000356141 CYP19A1P11511 503 aaPredicted RBP21.42■■□□□ 1.02
NPAS3-202ENST00000356141 DDX46Q7L014 1031 aaKnown RBP21.41■■□□□ 1.02
NPAS3-202ENST00000356141 ERC1Q8IUD2 1116 aa21.41■■□□□ 1.02
NPAS3-202ENST00000356141 FSD1Q9BTV5 496 aa21.41■■□□□ 1.02
NPAS3-202ENST00000356141 PTH1RQ03431 593 aa21.41■■□□□ 1.02
NPAS3-202ENST00000356141 N4BP2Q86UW6 1770 aaPredicted RBP21.41■■□□□ 1.02
NPAS3-202ENST00000356141 ARFGEF2Q9Y6D5 1785 aa21.4■■□□□ 1.02
NPAS3-202ENST00000356141 H7C1W4 665 aa21.4■■□□□ 1.02
NPAS3-202ENST00000356141 PKP1Q13835 747 aa21.4■■□□□ 1.02
NPAS3-202ENST00000356141 HDAC5Q9UQL6 1122 aa21.4■■□□□ 1.02
NPAS3-202ENST00000356141 TCIRG1Q13488 830 aa21.4■■□□□ 1.02
NPAS3-202ENST00000356141 FOXD4L6Q3SYB3 417 aaPredicted RBP21.4■■□□□ 1.02
NPAS3-202ENST00000356141 TNNI3KQ59H18 835 aa21.4■■□□□ 1.02
NPAS3-202ENST00000356141 FOXD4L3Q6VB84 417 aaPredicted RBP21.4■■□□□ 1.02
NPAS3-202ENST00000356141 GPATCH3Q96I76 525 aa21.4■■□□□ 1.02
NPAS3-202ENST00000356141 FPGT-TNNI3KV9GXZ4 949 aa21.4■■□□□ 1.02
NPAS3-202ENST00000356141 DZIP3Q86Y13 1208 aaKnown RBP21.39■■□□□ 1.02
NPAS3-202ENST00000356141 SNRKQ9NRH2 765 aa21.39■■□□□ 1.02
NPAS3-202ENST00000356141 BCL9O00512 1426 aa21.39■■□□□ 1.01
NPAS3-202ENST00000356141 COL9A3Q14050 684 aaPredicted RBP21.39■■□□□ 1.01
NPAS3-202ENST00000356141 TAF7LQ5H9L4 462 aa21.39■■□□□ 1.01
NPAS3-202ENST00000356141 DISP2A7MBM2 1401 aa21.39■■□□□ 1.01
NPAS3-202ENST00000356141 RABEP1Q15276 862 aa21.38■■□□□ 1.01
NPAS3-202ENST00000356141 TPRNQ4KMQ1 711 aa21.38■■□□□ 1.01
NPAS3-202ENST00000356141 CCDC129Q6ZRS4 1044 aa21.38■■□□□ 1.01
NPAS3-202ENST00000356141 RASEFQ8IZ41 740 aa21.38■■□□□ 1.01
NPAS3-202ENST00000356141 SEC62Q99442 399 aaKnown RBP21.38■■□□□ 1.01
NPAS3-202ENST00000356141 AK9Q5TCS8 1911 aa21.38■■□□□ 1.01
NPAS3-202ENST00000356141 NMIQ13287 307 aaPredicted RBP21.37■■□□□ 1.01
NPAS3-202ENST00000356141 ITPK1Q13572 414 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 BICDL1Q6ZP65 573 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 TRMT112Q9UI30 125 aaKnown RBP21.37■■□□□ 1.01
NPAS3-202ENST00000356141 HCLS1P14317 486 aaPredicted RBP21.37■■□□□ 1.01
NPAS3-202ENST00000356141 TCEANC2Q96MN5 208 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 TNS2Q63HR2 1409 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 A0A0D9SFI3 127 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 SNAP23O00161 211 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 KCNJ4P48050 445 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 CCDC24Q8N4L8 307 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 CCDC191Q8NCU4 936 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 SNX21Q969T3 373 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 CHMP5Q9NZZ3 219 aa21.37■■□□□ 1.01
NPAS3-202ENST00000356141 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
NPAS3-202ENST00000356141 SSFA2P28290 1259 aa21.36■■□□□ 1.01
NPAS3-202ENST00000356141 KIAA1211Q6ZU35 1233 aa21.36■■□□□ 1.01
NPAS3-202ENST00000356141 SPATA31A5Q5VU36 1347 aa21.36■■□□□ 1.01
NPAS3-202ENST00000356141 SPATA31A7Q8IWB4 1347 aa21.36■■□□□ 1.01
NPAS3-202ENST00000356141 SGSM2O43147 1006 aa21.36■■□□□ 1.01
NPAS3-202ENST00000356141 HSP90AB3PQ58FF7 597 aa21.36■■□□□ 1.01
NPAS3-202ENST00000356141 PRPF40BQ6NWY9 871 aaKnown RBP21.36■■□□□ 1.01
NPAS3-202ENST00000356141 HELBQ8NG08 1087 aaPredicted RBP21.36■■□□□ 1.01
NPAS3-202ENST00000356141 COPRSQ9NQ92 184 aa21.36■■□□□ 1.01
NPAS3-202ENST00000356141 ITGB4P16144 1822 aa21.35■■□□□ 1.01
NPAS3-202ENST00000356141 CRKLP46109 303 aaKnown RBP21.35■■□□□ 1.01
NPAS3-202ENST00000356141 CCDC57Q2TAC2 916 aa21.35■■□□□ 1.01
NPAS3-202ENST00000356141 RABL6Q3YEC7 729 aaPredicted RBP21.35■■□□□ 1.01
NPAS3-202ENST00000356141 LOC102724428A0A0B4J2F2 783 aa21.35■■□□□ 1.01
NPAS3-202ENST00000356141 SIK1P57059 783 aa21.35■■□□□ 1.01
NPAS3-202ENST00000356141 ATG9AQ7Z3C6 839 aa21.35■■□□□ 1.01
NPAS3-202ENST00000356141 A0A0U1RQG5 324 aaPredicted RBP21.34■■□□□ 1.01
NPAS3-202ENST00000356141 GREM2Q9H772 168 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms