RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 SRRTQ9BXP5 876 aaKnown RBP6.92□□□□□ -1.3
PTPRT-201ENST00000356100 MYO5CQ9NQX4 1742 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 NOS1P29475 1434 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 PLCG2P16885 1265 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 TUBBP07437 444 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 FSD2A1L4K1 749 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 TBCAO75347 108 aaKnown RBP6.92□□□□□ -1.3
PTPRT-201ENST00000356100 SSR1P43307 286 aaKnown RBP6.92□□□□□ -1.3
PTPRT-201ENST00000356100 MAP2K1Q02750 393 aaPredicted RBP6.92□□□□□ -1.3
PTPRT-201ENST00000356100 PRIMPOLQ96LW4 560 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 GCC2Q8IWJ2 1684 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 FAM177BA6PVY3 158 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 CNNM3Q8NE01 707 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 ABCF2Q9UG63 623 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 DHX37Q8IY37 1157 aaKnown RBP6.92□□□□□ -1.3
PTPRT-201ENST00000356100 SSH1Q8WYL5 1049 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 PHF8Q9UPP1 1060 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 IKBKGQ9Y6K9 419 aa6.92□□□□□ -1.3
PTPRT-201ENST00000356100 SYCP2Q9BX26 1530 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 CCDC175P0C221 793 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 NBPF7P0C2Y1 421 aaPredicted RBP6.91□□□□□ -1.3
PTPRT-201ENST00000356100 TTC41PQ6P2S7 1318 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 MSH6P52701 1360 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 KCNG4Q8TDN1 519 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 HDAC1Q13547 482 aaPredicted RBP6.91□□□□□ -1.3
PTPRT-201ENST00000356100 ST5P78524 1137 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 CRNKL1Q9BZJ0 848 aaKnown RBP6.91□□□□□ -1.3
PTPRT-201ENST00000356100 EXOC6BQ9Y2D4 811 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 UHRF1BP1LA0JNW5 1464 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 SPATA24Q86W54 205 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 CEP112Q8N8E3 955 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 PABPN1LA6NDY0 278 aaKnown RBP6.91□□□□□ -1.3
PTPRT-201ENST00000356100 FERP16591 822 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 CCDC152Q4G0S7 254 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 ALDH1L1O75891 902 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 CALM1P0DP23 149 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 CALM2P0DP24 149 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 CALM3P0DP25 149 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 APBB1IPQ7Z5R6 666 aaPredicted RBP6.91□□□□□ -1.3
PTPRT-201ENST00000356100 IFNL2Q8IZJ0 200 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 TTC14Q96N46 770 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 TRMT112Q9UI30 125 aaKnown RBP6.91□□□□□ -1.3
PTPRT-201ENST00000356100 C6orf163Q5TEZ5 329 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 CCDC102BQ68D86 513 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 TBC1D5Q92609 795 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 GPATCH8Q9UKJ3 1502 aaKnown RBP6.91□□□□□ -1.3
PTPRT-201ENST00000356100 PIBF1Q8WXW3 757 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 FBXO3Q9UK99 471 aa6.91□□□□□ -1.3
PTPRT-201ENST00000356100 GOLGA8AA7E2F4 631 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 CABP5Q9NP86 173 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 RAD50Q92878 1312 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 STX6O43752 255 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 CCDC96Q2M329 555 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 WDR7Q9Y4E6 1490 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 TNRQ92752 1358 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 SNRPA1P09661 255 aaKnown RBP6.9□□□□□ -1.3
PTPRT-201ENST00000356100 CCDC174Q6PII3 467 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 MSANTD4Q8NCY6 345 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 FERMT2Q96AC1 680 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 TSNARE1Q96NA8 513 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 CALCOCO1Q9P1Z2 691 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 CTNNA2P26232 953 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 TTC22Q5TAA0 569 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 NAP1L4Q99733 375 aaKnown RBP6.9□□□□□ -1.3
PTPRT-201ENST00000356100 ABCC1P33527 1531 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 RANBP6O60518 1105 aaKnown RBP6.9□□□□□ -1.3
PTPRT-201ENST00000356100 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
PTPRT-201ENST00000356100 ESR2Q92731 530 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 KAT14Q9H8E8 782 aa6.9□□□□□ -1.3
PTPRT-201ENST00000356100 C14orf93Q9H972 538 aaKnown RBP6.9□□□□□ -1.3
PTPRT-201ENST00000356100 ATL3Q6DD88 541 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 DDX46Q7L014 1031 aaKnown RBP6.9□□□□□ -1.31
PTPRT-201ENST00000356100 NSRP1Q9H0G5 558 aaKnown RBP6.9□□□□□ -1.31
PTPRT-201ENST00000356100 IL1RAPL2Q9NP60 686 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 TRIM27P14373 513 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 MCM10Q7L590 875 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 RAPGEF3O95398 923 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 GRIPAP1Q4V328 841 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 CEP128Q6ZU80 1094 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 NUTM1Q86Y26 1132 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 SMARCC1Q92922 1105 aaPredicted RBP6.9□□□□□ -1.31
PTPRT-201ENST00000356100 PIK3C2GO75747 1445 aa6.9□□□□□ -1.31
PTPRT-201ENST00000356100 ANKS4BQ8N8V4 417 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 BICDL2A1A5D9 508 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 METAP2P50579 478 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTPRT-201ENST00000356100 FAM193AP78312 1265 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 KIF4BQ2VIQ3 1234 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 IFIT3O14879 490 aaKnown RBP6.89□□□□□ -1.31
PTPRT-201ENST00000356100 CALML3P27482 149 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 UBA7P41226 1012 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 EXOC1Q9NV70 894 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 CCDC40Q4G0X9 1142 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 LMBR1Q8WVP7 490 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 FLT4P35916 1363 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 NLRP5P59047 1200 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 KLHL40Q2TBA0 621 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 PPP1R1BQ9UD71 204 aaPredicted RBP6.89□□□□□ -1.31
PTPRT-201ENST00000356100 STK24Q9Y6E0 443 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms