RNA–Protein interactions for RNA: ENST00000355852.6

PCBP4-202, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-202ENST00000355852 PKNOX2Q96KN3 472 aa20.31■□□□□ 0.84
PCBP4-202ENST00000355852 RGPD3A6NKT7 1758 aaPredicted RBP20.3■□□□□ 0.84
PCBP4-202ENST00000355852 RGPD4Q7Z3J3 1758 aa20.3■□□□□ 0.84
PCBP4-202ENST00000355852 SMIM5Q71RC9 77 aa20.3■□□□□ 0.84
PCBP4-202ENST00000355852 USP44Q9H0E7 712 aa20.3■□□□□ 0.84
PCBP4-202ENST00000355852 NEURL1BA8MQ27 555 aa20.29■□□□□ 0.84
PCBP4-202ENST00000355852 RTCBQ9Y3I0 505 aaKnown RBP20.29■□□□□ 0.84
PCBP4-202ENST00000355852 NUP98P52948 1817 aa20.29■□□□□ 0.84
PCBP4-202ENST00000355852 GNAI3P08754 354 aa20.29■□□□□ 0.84
PCBP4-202ENST00000355852 HLFQ16534 295 aa20.29■□□□□ 0.84
PCBP4-202ENST00000355852 C22orf23Q9BZE7 217 aa20.29■□□□□ 0.84
PCBP4-202ENST00000355852 GRPEL1Q9HAV7 217 aa20.29■□□□□ 0.84
PCBP4-202ENST00000355852 C9orf78Q9NZ63 289 aaPredicted RBP20.29■□□□□ 0.84
PCBP4-202ENST00000355852 RPS6KA4O75676 772 aa20.28■□□□□ 0.84
PCBP4-202ENST00000355852 UBTFL1P0CB47 393 aaPredicted RBP20.28■□□□□ 0.84
PCBP4-202ENST00000355852 SF3B2Q13435 895 aaKnown RBP20.28■□□□□ 0.84
PCBP4-202ENST00000355852 CIZ1Q9ULV3 898 aaPredicted RBP20.28■□□□□ 0.84
PCBP4-202ENST00000355852 ANKRD36CQ5JPF3 1778 aa20.28■□□□□ 0.84
PCBP4-202ENST00000355852 PHF14O94880 888 aa20.27■□□□□ 0.84
PCBP4-202ENST00000355852 AMIGO3Q86WK7 504 aa20.27■□□□□ 0.84
PCBP4-202ENST00000355852 UBR3Q6ZT12 1888 aa20.27■□□□□ 0.84
PCBP4-202ENST00000355852 ESPNB1AK53 854 aa20.27■□□□□ 0.84
PCBP4-202ENST00000355852 NBPF7P0C2Y1 421 aaPredicted RBP20.27■□□□□ 0.84
PCBP4-202ENST00000355852 GIGYF2Q6Y7W6 1299 aaKnown RBP20.27■□□□□ 0.84
PCBP4-202ENST00000355852 BCORQ6W2J9 1755 aa20.27■□□□□ 0.83
PCBP4-202ENST00000355852 A0A087WZG4 1122 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 ERVV-1B6SEH8 477 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 GCKRQ14397 625 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 SKOR2Q2VWA4 1001 aaPredicted RBP20.26■□□□□ 0.83
PCBP4-202ENST00000355852 PANK2Q9BZ23 570 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 C4AP0C0L4 1744 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 GRM8O00222 908 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 GNAI2P04899 355 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 EN1Q05925 392 aaPredicted RBP20.26■□□□□ 0.83
PCBP4-202ENST00000355852 SNX21Q969T3 373 aa20.26■□□□□ 0.83
PCBP4-202ENST00000355852 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
PCBP4-202ENST00000355852 CAMTA2O94983 1202 aa20.25■□□□□ 0.83
PCBP4-202ENST00000355852 GPTP24298 496 aa20.25■□□□□ 0.83
PCBP4-202ENST00000355852 DDIT3P35638 169 aa20.25■□□□□ 0.83
PCBP4-202ENST00000355852 LRRFIP2Q9Y608 721 aaKnown RBP20.25■□□□□ 0.83
PCBP4-202ENST00000355852 TPM2P07951 284 aa20.24■□□□□ 0.83
PCBP4-202ENST00000355852 HSP90AB3PQ58FF7 597 aa20.24■□□□□ 0.83
PCBP4-202ENST00000355852 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
PCBP4-202ENST00000355852 HMGB2P26583 209 aaKnown RBP20.23■□□□□ 0.83
PCBP4-202ENST00000355852 HDAC1Q13547 482 aaPredicted RBP20.23■□□□□ 0.83
PCBP4-202ENST00000355852 EZH2Q15910 746 aaKnown RBP20.23■□□□□ 0.83
PCBP4-202ENST00000355852 HSCBQ8IWL3 235 aa20.23■□□□□ 0.83
PCBP4-202ENST00000355852 ISCA1Q9BUE6 129 aa20.23■□□□□ 0.83
PCBP4-202ENST00000355852 BAG6P46379 1132 aa20.22■□□□□ 0.83
PCBP4-202ENST00000355852 UBE3BQ7Z3V4 1068 aa20.22■□□□□ 0.83
PCBP4-202ENST00000355852 CCDC191Q8NCU4 936 aa20.22■□□□□ 0.83
PCBP4-202ENST00000355852 JARID2Q92833 1246 aaPredicted RBP20.22■□□□□ 0.83
PCBP4-202ENST00000355852 ZNF652Q9Y2D9 606 aa20.22■□□□□ 0.83
PCBP4-202ENST00000355852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.22■□□□□ 0.83
PCBP4-202ENST00000355852 ZPR1O75312 459 aa20.22■□□□□ 0.83
PCBP4-202ENST00000355852 TRAPPC3LQ5T215 181 aa20.22■□□□□ 0.83
PCBP4-202ENST00000355852 ARHGEF1Q92888 912 aaKnown RBP20.22■□□□□ 0.83
PCBP4-202ENST00000355852 RFC4P35249 363 aa20.21■□□□□ 0.83
PCBP4-202ENST00000355852 CEP85Q6P2H3 762 aa20.21■□□□□ 0.83
PCBP4-202ENST00000355852 CAMKK2Q96RR4 588 aa20.21■□□□□ 0.83
PCBP4-202ENST00000355852 SRP68Q9UHB9 627 aaKnown RBP20.21■□□□□ 0.83
PCBP4-202ENST00000355852 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
PCBP4-202ENST00000355852 ZNF827Q17R98 1081 aa20.2■□□□□ 0.83
PCBP4-202ENST00000355852 DEFB132Q7Z7B7 95 aa20.2■□□□□ 0.83
PCBP4-202ENST00000355852 GZF1Q9H116 711 aaPredicted RBP20.2■□□□□ 0.83
PCBP4-202ENST00000355852 TFCP2L1Q9NZI6 479 aa20.2■□□□□ 0.83
PCBP4-202ENST00000355852 NARFQ9UHQ1 456 aa20.2■□□□□ 0.83
PCBP4-202ENST00000355852 UTYO14607 1347 aa20.2■□□□□ 0.82
PCBP4-202ENST00000355852 ADRA2BP18089 450 aa20.2■□□□□ 0.82
PCBP4-202ENST00000355852 RBM25P49756 843 aaKnown RBP20.2■□□□□ 0.82
PCBP4-202ENST00000355852 USPL1Q5W0Q7 1092 aa20.2■□□□□ 0.82
PCBP4-202ENST00000355852 SMC5Q8IY18 1101 aa20.2■□□□□ 0.82
PCBP4-202ENST00000355852 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
PCBP4-202ENST00000355852 NLRP10Q86W26 655 aa20.19■□□□□ 0.82
PCBP4-202ENST00000355852 SIRT2Q8IXJ6 389 aa20.19■□□□□ 0.82
PCBP4-202ENST00000355852 ANKRD44Q8N8A2 993 aa20.19■□□□□ 0.82
PCBP4-202ENST00000355852 TUBGCP6Q96RT7 1819 aa20.19■□□□□ 0.82
PCBP4-202ENST00000355852 UBN2Q6ZU65 1347 aa20.19■□□□□ 0.82
PCBP4-202ENST00000355852 SSFA2P28290 1259 aa20.19■□□□□ 0.82
PCBP4-202ENST00000355852 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
PCBP4-202ENST00000355852 TRIM44Q96DX7 344 aaPredicted RBP20.19■□□□□ 0.82
PCBP4-202ENST00000355852 SUCLG2Q96I99 432 aa20.19■□□□□ 0.82
PCBP4-202ENST00000355852 GBP4Q96PP9 640 aa20.19■□□□□ 0.82
PCBP4-202ENST00000355852 USP42Q9H9J4 1324 aaKnown RBP20.18■□□□□ 0.82
PCBP4-202ENST00000355852 ZNF34Q8IZ26 560 aa20.18■□□□□ 0.82
PCBP4-202ENST00000355852 HDAC5Q9UQL6 1122 aa20.18■□□□□ 0.82
PCBP4-202ENST00000355852 NIP7Q9Y221 180 aaKnown RBP eCLIP20.18■□□□□ 0.82
PCBP4-202ENST00000355852 CLEC4GQ6UXB4 293 aa20.17■□□□□ 0.82
PCBP4-202ENST00000355852 ZMYND15Q9H091 742 aa20.17■□□□□ 0.82
PCBP4-202ENST00000355852 FAM177BA6PVY3 158 aa20.17■□□□□ 0.82
PCBP4-202ENST00000355852 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
PCBP4-202ENST00000355852 TERF1P54274 439 aa20.16■□□□□ 0.82
PCBP4-202ENST00000355852 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
PCBP4-202ENST00000355852 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
PCBP4-202ENST00000355852 H7C1W4 665 aa20.15■□□□□ 0.82
PCBP4-202ENST00000355852 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
PCBP4-202ENST00000355852 BICC1Q9H694 974 aaKnown RBP20.15■□□□□ 0.82
PCBP4-202ENST00000355852 TRMT112Q9UI30 125 aaKnown RBP20.15■□□□□ 0.82
PCBP4-202ENST00000355852 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms