RNA–Protein interactions for RNA: ENST00000355666.5

TTC3-202, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TTC3, Length 7,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-202ENST00000355666 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
TTC3-202ENST00000355666 STAP2Q9UGK3 403 aa11.8□□□□□ -0.52
TTC3-202ENST00000355666 TOPAZ1Q8N9V7 1692 aa11.8□□□□□ -0.52
TTC3-202ENST00000355666 IGHMBP2P38935 993 aaKnown RBP11.8□□□□□ -0.52
TTC3-202ENST00000355666 KIF1AQ12756 1690 aa11.8□□□□□ -0.52
TTC3-202ENST00000355666 OVOS2A0A0G2JMS6 1433 aa11.8□□□□□ -0.52
TTC3-202ENST00000355666 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
TTC3-202ENST00000355666 ZNF335Q9H4Z2 1342 aaPredicted RBP11.8□□□□□ -0.52
TTC3-202ENST00000355666 PROSER3Q2NL68 480 aa11.79□□□□□ -0.52
TTC3-202ENST00000355666 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
TTC3-202ENST00000355666 SSFA2P28290 1259 aa11.79□□□□□ -0.52
TTC3-202ENST00000355666 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
TTC3-202ENST00000355666 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
TTC3-202ENST00000355666 TMX3Q96JJ7 454 aa11.78□□□□□ -0.52
TTC3-202ENST00000355666 GPTP24298 496 aa11.78□□□□□ -0.52
TTC3-202ENST00000355666 POLA2Q14181 598 aa11.78□□□□□ -0.52
TTC3-202ENST00000355666 CAVIN1Q6NZI2 390 aaKnown RBP11.78□□□□□ -0.52
TTC3-202ENST00000355666 LETM1O95202 739 aaPredicted RBP11.78□□□□□ -0.52
TTC3-202ENST00000355666 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
TTC3-202ENST00000355666 TFCP2Q12800 502 aa11.78□□□□□ -0.52
TTC3-202ENST00000355666 NGLY1Q96IV0 654 aa11.77□□□□□ -0.52
TTC3-202ENST00000355666 ERICH2A1L162 156 aa11.77□□□□□ -0.52
TTC3-202ENST00000355666 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.52
TTC3-202ENST00000355666 NFXL1Q6ZNB6 911 aa11.77□□□□□ -0.53
TTC3-202ENST00000355666 SF3A1Q15459 793 aaKnown RBP11.77□□□□□ -0.53
TTC3-202ENST00000355666 NOL10Q9BSC4 688 aaKnown RBP11.77□□□□□ -0.53
TTC3-202ENST00000355666 GOLIM4O00461 696 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 NMIQ13287 307 aaPredicted RBP11.76□□□□□ -0.53
TTC3-202ENST00000355666 TTF1Q15361 905 aaPredicted RBP11.76□□□□□ -0.53
TTC3-202ENST00000355666 IMMTQ16891 758 aaKnown RBP11.76□□□□□ -0.53
TTC3-202ENST00000355666 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 MST1RQ04912 1400 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
TTC3-202ENST00000355666 TRIM29Q14134 588 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 LARP1BQ659C4 914 aaKnown RBP11.76□□□□□ -0.53
TTC3-202ENST00000355666 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 AMOTL1Q8IY63 956 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 ATP10DQ9P241 1426 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 PRAMEF22A3QJZ6 481 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 SGSM2O43147 1006 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 SLC5A1P13866 664 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 NACAP1Q9BZK3 213 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 CYP27B1O15528 508 aa11.76□□□□□ -0.53
TTC3-202ENST00000355666 INTS4Q96HW7 963 aaKnown RBP11.75□□□□□ -0.53
TTC3-202ENST00000355666 HEG1Q9ULI3 1381 aa11.75□□□□□ -0.53
TTC3-202ENST00000355666 A1BGP04217 495 aa11.75□□□□□ -0.53
TTC3-202ENST00000355666 SART3Q15020 963 aaKnown RBP11.75□□□□□ -0.53
TTC3-202ENST00000355666 RBM8AQ9Y5S9 174 aaKnown RBP11.75□□□□□ -0.53
TTC3-202ENST00000355666 BAG4O95429 457 aaKnown RBP11.75□□□□□ -0.53
TTC3-202ENST00000355666 DZIP3Q86Y13 1208 aaKnown RBP11.75□□□□□ -0.53
TTC3-202ENST00000355666 ZFYP08048 801 aaPredicted RBP11.75□□□□□ -0.53
TTC3-202ENST00000355666 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
TTC3-202ENST00000355666 CCDC83Q8IWF9 413 aa11.75□□□□□ -0.53
TTC3-202ENST00000355666 AKAP17AQ02040 695 aaKnown RBP11.74□□□□□ -0.53
TTC3-202ENST00000355666 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
TTC3-202ENST00000355666 EYA2O00167 538 aa11.74□□□□□ -0.53
TTC3-202ENST00000355666 NASPP49321 788 aaPredicted RBP11.74□□□□□ -0.53
TTC3-202ENST00000355666 MTX1Q13505 466 aa11.74□□□□□ -0.53
TTC3-202ENST00000355666 STK3Q13188 491 aa11.74□□□□□ -0.53
TTC3-202ENST00000355666 PAG1Q9NWQ8 432 aa11.74□□□□□ -0.53
TTC3-202ENST00000355666 DDX46Q7L014 1031 aaKnown RBP11.74□□□□□ -0.53
TTC3-202ENST00000355666 DRC7Q8IY82 874 aa11.74□□□□□ -0.53
TTC3-202ENST00000355666 BICD2Q8TD16 824 aa11.74□□□□□ -0.53
TTC3-202ENST00000355666 CCDC171Q6TFL3 1326 aa11.74□□□□□ -0.53
TTC3-202ENST00000355666 IDH1O75874 414 aaKnown RBP11.73□□□□□ -0.53
TTC3-202ENST00000355666 UQCRFS1P1P0C7P4 283 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 KRT85P78386 507 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 KIAA2012Q0VF49 1180 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 NRDCO43847 1150 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 DNTTIP2Q5QJE6 756 aaKnown RBP11.73□□□□□ -0.53
TTC3-202ENST00000355666 AIDAQ96BJ3 306 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
TTC3-202ENST00000355666 ZPR1O75312 459 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 GRPEL1Q9HAV7 217 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 PEAK1Q9H792 1746 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 FIBPO43427 364 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 CCDC152Q4G0S7 254 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 ADCY9O60503 1353 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 CPDO75976 1380 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 HSPA4P34932 840 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 TPM4P67936 248 aa11.73□□□□□ -0.53
TTC3-202ENST00000355666 ZNF396Q96N95 335 aaPredicted RBP11.73□□□□□ -0.53
TTC3-202ENST00000355666 G3V3G9 751 aa11.72□□□□□ -0.53
TTC3-202ENST00000355666 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
TTC3-202ENST00000355666 VPS53Q5VIR6 699 aa11.72□□□□□ -0.53
TTC3-202ENST00000355666 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
TTC3-202ENST00000355666 DNAJC10Q8IXB1 793 aa11.72□□□□□ -0.53
TTC3-202ENST00000355666 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
TTC3-202ENST00000355666 NEK1Q96PY6 1258 aa11.72□□□□□ -0.53
TTC3-202ENST00000355666 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
TTC3-202ENST00000355666 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
TTC3-202ENST00000355666 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
TTC3-202ENST00000355666 ACSBG1Q96GR2 724 aa11.72□□□□□ -0.53
TTC3-202ENST00000355666 CHD2O14647 1828 aaKnown RBP11.72□□□□□ -0.53
TTC3-202ENST00000355666 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms