RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PI4KAP1Q8N8J0 262 aa14.41□□□□□ -0.1
COLCA1-201ENST00000355430 ZMYND15Q9H091 742 aa14.41□□□□□ -0.1
COLCA1-201ENST00000355430 MAP3K2Q9Y2U5 619 aa14.41□□□□□ -0.1
COLCA1-201ENST00000355430 TDO2P48775 406 aa14.4□□□□□ -0.1
COLCA1-201ENST00000355430 TTLL5Q6EMB2 1281 aa14.4□□□□□ -0.1
COLCA1-201ENST00000355430 C16orf45Q96MC5 204 aaPredicted RBP14.4□□□□□ -0.1
COLCA1-201ENST00000355430 MTHFSDQ2M296 383 aaKnown RBP14.4□□□□□ -0.1
COLCA1-201ENST00000355430 CCDC152Q4G0S7 254 aa14.4□□□□□ -0.1
COLCA1-201ENST00000355430 TRPC5Q9UL62 973 aaPredicted RBP14.4□□□□□ -0.1
COLCA1-201ENST00000355430 IDH1O75874 414 aaKnown RBP14.4□□□□□ -0.1
COLCA1-201ENST00000355430 GUCY1B3Q02153 619 aa14.4□□□□□ -0.1
COLCA1-201ENST00000355430 IP6K1Q92551 441 aa14.4□□□□□ -0.1
COLCA1-201ENST00000355430 DCAF5Q96JK2 942 aa14.4□□□□□ -0.1
COLCA1-201ENST00000355430 CLEC11AQ9Y240 323 aa14.4□□□□□ -0.1
COLCA1-201ENST00000355430 TTC37Q6PGP7 1564 aa14.4□□□□□ -0.1
COLCA1-201ENST00000355430 IL13P35225 146 aa14.4□□□□□ -0.11
COLCA1-201ENST00000355430 USP5P45974 858 aa14.4□□□□□ -0.11
COLCA1-201ENST00000355430 FAM177A1Q8N128 213 aaPredicted RBP14.4□□□□□ -0.11
COLCA1-201ENST00000355430 STK11IPQ8N1F8 1099 aa14.4□□□□□ -0.11
COLCA1-201ENST00000355430 NLRP3Q96P20 1036 aa14.4□□□□□ -0.11
COLCA1-201ENST00000355430 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 HS1BP3Q53T59 392 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 CCNL1Q9UK58 526 aaPredicted RBP14.39□□□□□ -0.11
COLCA1-201ENST00000355430 CHMLP26374 656 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 NOLC1Q14978 699 aaKnown RBP eCLIP14.39□□□□□ -0.11
COLCA1-201ENST00000355430 TRAPPC3LQ5T215 181 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 ANTXR1Q9H6X2 564 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 HDAC9Q9UKV0 1011 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 TMEM94Q12767 1356 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 PREX2Q70Z35 1606 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 CDC42BPAQ5VT25 1732 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 IPO7O95373 1038 aaKnown RBP14.39□□□□□ -0.11
COLCA1-201ENST00000355430 F13A1P00488 732 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 TNNT1P13805 278 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 PPP4R3BQ5MIZ7 849 aa14.39□□□□□ -0.11
COLCA1-201ENST00000355430 KRI1Q8N9T8 703 aaKnown RBP14.39□□□□□ -0.11
COLCA1-201ENST00000355430 CCDC70Q6NSX1 233 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 TPTE2Q6XPS3 522 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 G2E3Q7L622 706 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 JMYQ8N9B5 988 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 TTC12Q9H892 705 aaPredicted RBP14.38□□□□□ -0.11
COLCA1-201ENST00000355430 DDX19AQ9NUU7 478 aaKnown RBP14.38□□□□□ -0.11
COLCA1-201ENST00000355430 APBA3O96018 575 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 PTPN14Q15678 1187 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 AIDAQ96BJ3 306 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 SIRT1Q96EB6 747 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 CTNNA3Q9UI47 895 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 CFAP65Q6ZU64 1925 aaKnown RBP14.38□□□□□ -0.11
COLCA1-201ENST00000355430 RXRBP28702 533 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 DNM1Q05193 864 aaKnown RBP14.38□□□□□ -0.11
COLCA1-201ENST00000355430 JDP2Q8WYK2 163 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 CCDC66A2RUB6 948 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 POLR3DP05423 398 aaPredicted RBP14.38□□□□□ -0.11
COLCA1-201ENST00000355430 TMEM132AQ24JP5 1023 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 CHPF2Q9P2E5 772 aa14.38□□□□□ -0.11
COLCA1-201ENST00000355430 MPHOSPH10O00566 681 aaKnown RBP14.37□□□□□ -0.11
COLCA1-201ENST00000355430 LDHCP07864 332 aa14.37□□□□□ -0.11
COLCA1-201ENST00000355430 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
COLCA1-201ENST00000355430 UGGT1Q9NYU2 1555 aa14.37□□□□□ -0.11
COLCA1-201ENST00000355430 CROCC2H7BZ55 1655 aa14.37□□□□□ -0.11
COLCA1-201ENST00000355430 GSPT1P15170 499 aaKnown RBP14.37□□□□□ -0.11
COLCA1-201ENST00000355430 AK2P54819 239 aa14.37□□□□□ -0.11
COLCA1-201ENST00000355430 TCEANC2Q96MN5 208 aa14.37□□□□□ -0.11
COLCA1-201ENST00000355430 ANO10Q9NW15 660 aa14.37□□□□□ -0.11
COLCA1-201ENST00000355430 LTKP29376 864 aa14.36□□□□□ -0.11
COLCA1-201ENST00000355430 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
COLCA1-201ENST00000355430 PLEKHF1Q96S99 279 aa14.36□□□□□ -0.11
COLCA1-201ENST00000355430 LMBRD1Q9NUN5 540 aa14.36□□□□□ -0.11
COLCA1-201ENST00000355430 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.36□□□□□ -0.11
COLCA1-201ENST00000355430 ZNF445P59923 1031 aa14.36□□□□□ -0.11
COLCA1-201ENST00000355430 SOGA3Q5TF21 947 aa14.36□□□□□ -0.11
COLCA1-201ENST00000355430 NIP7Q9Y221 180 aaKnown RBP eCLIP14.36□□□□□ -0.11
COLCA1-201ENST00000355430 GNPATO15228 680 aa14.36□□□□□ -0.11
COLCA1-201ENST00000355430 CCT2P78371 535 aaKnown RBP14.36□□□□□ -0.11
COLCA1-201ENST00000355430 INTS4Q96HW7 963 aaKnown RBP14.36□□□□□ -0.11
COLCA1-201ENST00000355430 QTRT2Q9H974 415 aaKnown RBP14.36□□□□□ -0.11
COLCA1-201ENST00000355430 TRMT1Q9NXH9 659 aaKnown RBP14.36□□□□□ -0.11
COLCA1-201ENST00000355430 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
COLCA1-201ENST00000355430 MAP3K12Q12852 859 aa14.36□□□□□ -0.11
COLCA1-201ENST00000355430 USP19O94966 1318 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 ZCCHC11Q5TAX3 1644 aaKnown RBP14.35□□□□□ -0.11
COLCA1-201ENST00000355430 NLRP1Q9C000 1473 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 CBFA2T2O43439 604 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 SPTY2D1Q68D10 685 aaPredicted RBP14.35□□□□□ -0.11
COLCA1-201ENST00000355430 POLR1AO95602 1720 aaPredicted RBP14.35□□□□□ -0.11
COLCA1-201ENST00000355430 ADCY10Q96PN6 1610 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 MLH3Q9UHC1 1453 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 DHX8Q14562 1220 aaKnown RBP14.35□□□□□ -0.11
COLCA1-201ENST00000355430 NOL7Q9UMY1 257 aaKnown RBP14.35□□□□□ -0.11
COLCA1-201ENST00000355430 RBM8AQ9Y5S9 174 aaKnown RBP14.35□□□□□ -0.11
COLCA1-201ENST00000355430 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
COLCA1-201ENST00000355430 HOXC9P31274 260 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 NF2P35240 595 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 ZNF165P49910 485 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 DZIP3Q86Y13 1208 aaKnown RBP14.35□□□□□ -0.11
COLCA1-201ENST00000355430 ANKRD18AQ8IVF6 992 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 UBAC1Q9BSL1 405 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 SMTNL1A8MU46 457 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 PPFIA3O75145 1194 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms