RNA–Protein interactions for RNA: ENST00000355260.7

NUP98-202, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 5,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-202ENST00000355260 CNNM1Q9NRU3 951 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 CLIP2Q9UDT6 1046 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 C8orf58Q8NAV2 365 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 EHBP1Q8NDI1 1231 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 ADCY5O95622 1261 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 CCDC148Q8NFR7 591 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 CTAGE1Q96RT6 745 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
NUP98-202ENST00000355260 C8orf76Q96K31 380 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 FEZ1Q99689 392 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 USP8P40818 1118 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
NUP98-202ENST00000355260 LRRC27Q9C0I9 530 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 IL1RAPL2Q9NP60 686 aa9.42□□□□□ -0.9
NUP98-202ENST00000355260 TMEM2Q9UHN6 1383 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 ZNF652Q9Y2D9 606 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 PPRC1Q5VV67 1664 aaKnown RBP9.41□□□□□ -0.9
NUP98-202ENST00000355260 IL15P40933 162 aaPredicted RBP9.41□□□□□ -0.9
NUP98-202ENST00000355260 FSD2A1L4K1 749 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 IFIT1P09914 478 aaKnown RBP9.41□□□□□ -0.9
NUP98-202ENST00000355260 RUFY3Q7L099 469 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 MEIS3Q99687 375 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 THUMPD2Q9BTF0 503 aaKnown RBP9.41□□□□□ -0.9
NUP98-202ENST00000355260 CWC25Q9NXE8 425 aaPredicted RBP9.41□□□□□ -0.9
NUP98-202ENST00000355260 ERBB4Q15303 1308 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 PXDNLA1KZ92 1463 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 RDXP35241 583 aaKnown RBP9.41□□□□□ -0.9
NUP98-202ENST00000355260 CCAR1Q8IX12 1150 aaKnown RBP9.41□□□□□ -0.9
NUP98-202ENST00000355260 NCOA7Q8NI08 942 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 IP6K1Q92551 441 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
NUP98-202ENST00000355260 KIF20AO95235 890 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 SPAG1Q07617 926 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 TMCO3Q6UWJ1 677 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 FAM114A1Q8IWE2 563 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 DNAJC5BQ9UF47 199 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 STAP2Q9UGK3 403 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 MAP3K2Q9Y2U5 619 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 GNAT2P19087 354 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 MCMDC2Q4G0Z9 681 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 CLEC17AQ6ZS10 378 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 RMND1Q9NWS8 449 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 CDC42BPGQ6DT37 1551 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 GRM8O00222 908 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 ZNF500O60304 480 aaPredicted RBP9.4□□□□□ -0.9
NUP98-202ENST00000355260 SLC5A1P13866 664 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 PPP1R2P41236 205 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.9
NUP98-202ENST00000355260 RFX7Q2KHR2 1363 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 PNPLA6Q8IY17 1366 aa9.4□□□□□ -0.9
NUP98-202ENST00000355260 ARHGEF40Q8TER5 1519 aa9.4□□□□□ -0.91
NUP98-202ENST00000355260 MAP3K12Q12852 859 aa9.4□□□□□ -0.91
NUP98-202ENST00000355260 ZNF397Q8NF99 534 aaPredicted RBP9.4□□□□□ -0.91
NUP98-202ENST00000355260 UBXN4Q92575 508 aa9.4□□□□□ -0.91
NUP98-202ENST00000355260 UBAC1Q9BSL1 405 aa9.4□□□□□ -0.91
NUP98-202ENST00000355260 KRT23Q9C075 422 aa9.4□□□□□ -0.91
NUP98-202ENST00000355260 SPINK5Q9NQ38 1064 aaPredicted RBP9.4□□□□□ -0.91
NUP98-202ENST00000355260 IMPACTQ9P2X3 320 aa9.4□□□□□ -0.91
NUP98-202ENST00000355260 TMED8Q6PL24 325 aaPredicted RBP9.4□□□□□ -0.91
NUP98-202ENST00000355260 AGLP35573 1532 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 ERLIN2O94905 339 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 ZNF853P0CG23 659 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 BMS1Q14692 1282 aaKnown RBP9.39□□□□□ -0.91
NUP98-202ENST00000355260 PDILTQ8N807 584 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 A0A087WZG4 1122 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 IGHMBP2P38935 993 aaKnown RBP9.39□□□□□ -0.91
NUP98-202ENST00000355260 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
NUP98-202ENST00000355260 PES1O00541 588 aaKnown RBP9.39□□□□□ -0.91
NUP98-202ENST00000355260 NOLC1Q14978 699 aaKnown RBP eCLIP9.39□□□□□ -0.91
NUP98-202ENST00000355260 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 CCAR2Q8N163 923 aaKnown RBP9.39□□□□□ -0.91
NUP98-202ENST00000355260 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
NUP98-202ENST00000355260 G3V3G9 751 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 DCAF8Q5TAQ9 597 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 CAGE1Q8TC20 777 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 CCDC12Q8WUD4 166 aaPredicted RBP9.39□□□□□ -0.91
NUP98-202ENST00000355260 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
NUP98-202ENST00000355260 GOLIM4O00461 696 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 ZNF213O14771 459 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 KIF5CO60282 957 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 KDM4AO75164 1064 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 HSPA4P34932 840 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 SPC24Q8NBT2 197 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 RTL9Q8NET4 1388 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 CASQ1P31415 396 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 MRPS27Q92552 414 aaKnown RBP9.38□□□□□ -0.91
NUP98-202ENST00000355260 MYD88Q99836 296 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 KDRP35968 1356 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 TOP1P11387 765 aaKnown RBP9.38□□□□□ -0.91
NUP98-202ENST00000355260 MTHFSDQ2M296 383 aaKnown RBP9.38□□□□□ -0.91
NUP98-202ENST00000355260 CDK5RAP3Q96JB5 506 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 BRD1O95696 1058 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 CALM1P0DP23 149 aa9.38□□□□□ -0.91
NUP98-202ENST00000355260 CALM2P0DP24 149 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms