RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 TRMT2AQ8IZ69 625 aaKnown RBP14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 CCT2P78371 535 aaKnown RBP14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 MPNDQ8N594 471 aa14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 CDC5LQ99459 802 aaKnown RBP14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 TFCP2L1Q9NZI6 479 aa14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 IMMTQ16891 758 aaKnown RBP14.65□□□□□ -0.06
PCDHB11-201ENST00000354757 ZMYND15Q9H091 742 aa14.65□□□□□ -0.06
PCDHB11-201ENST00000354757 SMARCC1Q92922 1105 aaPredicted RBP14.65□□□□□ -0.06
PCDHB11-201ENST00000354757 METTL22Q9BUU2 404 aaPredicted RBP14.65□□□□□ -0.06
PCDHB11-201ENST00000354757 MAP3K12Q12852 859 aa14.65□□□□□ -0.06
PCDHB11-201ENST00000354757 GDPD2Q9HCC8 539 aa14.65□□□□□ -0.06
PCDHB11-201ENST00000354757 RTCBQ9Y3I0 505 aaKnown RBP14.65□□□□□ -0.06
PCDHB11-201ENST00000354757 DZIP1Q86YF9 867 aaKnown RBP14.64□□□□□ -0.07
PCDHB11-201ENST00000354757 CCDC34Q96HJ3 373 aa14.64□□□□□ -0.07
PCDHB11-201ENST00000354757 NLRP3Q96P20 1036 aa14.64□□□□□ -0.07
PCDHB11-201ENST00000354757 CCNL1Q9UK58 526 aaPredicted RBP14.64□□□□□ -0.07
PCDHB11-201ENST00000354757 SDF4Q9BRK5 362 aa14.64□□□□□ -0.07
PCDHB11-201ENST00000354757 UBAC1Q9BSL1 405 aa14.64□□□□□ -0.07
PCDHB11-201ENST00000354757 CCDC144CPQ8IYA2 1237 aa14.64□□□□□ -0.07
PCDHB11-201ENST00000354757 CTNNA3Q9UI47 895 aa14.64□□□□□ -0.07
PCDHB11-201ENST00000354757 MRE11P49959 708 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 GCKRQ14397 625 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 CCDC152Q4G0S7 254 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 PLBD2Q8NHP8 589 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 EDC3Q96F86 508 aaKnown RBP14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 DBNDD2Q9BQY9 259 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 SSFA2P28290 1259 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 CCDC73Q6ZRK6 1079 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 UTP14AQ9BVJ6 771 aaKnown RBP14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 CPA1P15085 419 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 KIAA2012Q0VF49 1180 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 ANKRD18AQ8IVF6 992 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 KDM2BQ8NHM5 1336 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 CCDC69A6NI79 296 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 GOLGA6L19H0YKK7 550 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 PDCP20941 246 aa14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 RBM10P98175 930 aaKnown RBP14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 NSFL1CQ9UNZ2 370 aaKnown RBP14.63□□□□□ -0.07
PCDHB11-201ENST00000354757 F8W031 263 aaPredicted RBP14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 RANBP6O60518 1105 aaKnown RBP14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 ESYT1Q9BSJ8 1104 aa14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 IL15P40933 162 aaPredicted RBP14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 USP5P45974 858 aa14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 DIP2BQ9P265 1576 aa14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 TULP4Q9NRJ4 1543 aa14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 MCM4P33991 863 aa14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 CHST3Q7LGC8 479 aa14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 CTDP1Q9Y5B0 961 aaPredicted RBP14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 ADGRL3Q9HAR2 1447 aa14.62□□□□□ -0.07
PCDHB11-201ENST00000354757 ZNF213O14771 459 aa14.61□□□□□ -0.07
PCDHB11-201ENST00000354757 CYP27B1O15528 508 aa14.61□□□□□ -0.07
PCDHB11-201ENST00000354757 SLC9C2Q5TAH2 1124 aa14.61□□□□□ -0.07
PCDHB11-201ENST00000354757 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
PCDHB11-201ENST00000354757 TAF5LO75529 589 aa14.61□□□□□ -0.07
PCDHB11-201ENST00000354757 SLC3A2P08195 630 aaKnown RBP14.61□□□□□ -0.07
PCDHB11-201ENST00000354757 HOXB7P09629 217 aa14.61□□□□□ -0.07
PCDHB11-201ENST00000354757 SPATA31A3Q5VYP0 1347 aa14.61□□□□□ -0.07
PCDHB11-201ENST00000354757 NMIQ13287 307 aaPredicted RBP14.6□□□□□ -0.07
PCDHB11-201ENST00000354757 ANKRD1Q15327 319 aa14.6□□□□□ -0.07
PCDHB11-201ENST00000354757 KRT32Q14532 448 aa14.6□□□□□ -0.07
PCDHB11-201ENST00000354757 PANK2Q9BZ23 570 aa14.6□□□□□ -0.07
PCDHB11-201ENST00000354757 RBM8AQ9Y5S9 174 aaKnown RBP14.6□□□□□ -0.07
PCDHB11-201ENST00000354757 WDR17Q8IZU2 1322 aa14.6□□□□□ -0.07
PCDHB11-201ENST00000354757 ESPNB1AK53 854 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 ITGA6P23229 1130 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 STK38Q15208 465 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 ABCC4O15439 1325 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 TPD52L1Q16890 204 aaPredicted RBP14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 ADAMTS13Q76LX8 1427 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 NEURL1BA8MQ27 555 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 ME1P48163 572 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 TPTE2Q6XPS3 522 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 CCDC129Q6ZRS4 1044 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 MIGA1Q8NAN2 632 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 WDR33Q9C0J8 1336 aaKnown RBP14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 A0A1B0GUL7 405 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 POLR3DP05423 398 aaPredicted RBP14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 ZNF853P0CG23 659 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 BABAM1Q9NWV8 329 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 ZBTB1Q9Y2K1 713 aa14.59□□□□□ -0.07
PCDHB11-201ENST00000354757 SH3TC1Q8TE82 1336 aa14.58□□□□□ -0.07
PCDHB11-201ENST00000354757 A0A0U1RQG5 324 aaPredicted RBP14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 BRF1Q92994 677 aa14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 CARD10Q9BWT7 1032 aa14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 RRAGDQ9NQL2 400 aaPredicted RBP14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 PTPRMP28827 1452 aa14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 NEXMIFQ5QGS0 1516 aa14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 TPM4P67936 248 aa14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 CWC22Q9HCG8 908 aaKnown RBP14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 MICU3Q86XE3 530 aa14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 TRIM22Q8IYM9 498 aa14.58□□□□□ -0.08
PCDHB11-201ENST00000354757 RRP9O43818 475 aaKnown RBP14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 MKNK2Q9HBH9 465 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 RTL1A6NKG5 1358 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 CHMLP26374 656 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms