RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 TPCN1Q9ULQ1 816 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 JCADQ9P266 1359 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 SMTNL1A8MU46 457 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 CPA1P15085 419 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 NLRP6P59044 892 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 TNMDQ9H2S6 317 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 PAXBP1Q9Y5B6 917 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 ADCY9O60503 1353 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 MARF1Q9Y4F3 1742 aaKnown RBP13.54□□□□□ -0.24
CAPN9-202ENST00000354537 KIF20AO95235 890 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 PLCB2Q00722 1185 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 SLIT1O75093 1534 aa13.54□□□□□ -0.24
CAPN9-202ENST00000354537 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 SLC27A2O14975 620 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 LTKP29376 864 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 ZNF75DP51815 510 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
CAPN9-202ENST00000354537 CHPF2Q9P2E5 772 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 DBF4Q9UBU7 674 aaPredicted RBP13.53□□□□□ -0.24
CAPN9-202ENST00000354537 AMOTL2Q9Y2J4 779 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 UTYO14607 1347 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 OVOS2A0A0G2JMS6 1433 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 GOLGA6L4A6NEF3 574 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 NEMFO60524 1076 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 RPS6KB1P23443 525 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
CAPN9-202ENST00000354537 LIG1P18858 919 aa13.52□□□□□ -0.24
CAPN9-202ENST00000354537 KRT32Q14532 448 aa13.52□□□□□ -0.24
CAPN9-202ENST00000354537 TSC1Q92574 1164 aa13.52□□□□□ -0.24
CAPN9-202ENST00000354537 SPATA32Q96LK8 384 aa13.52□□□□□ -0.24
CAPN9-202ENST00000354537 EID1Q9Y6B2 187 aa13.52□□□□□ -0.24
CAPN9-202ENST00000354537 PTGS1P23219 599 aa13.52□□□□□ -0.25
CAPN9-202ENST00000354537 KSR2Q6VAB6 950 aa13.52□□□□□ -0.25
CAPN9-202ENST00000354537 SPC24Q8NBT2 197 aa13.52□□□□□ -0.25
CAPN9-202ENST00000354537 LEO1Q8WVC0 666 aaPredicted RBP13.52□□□□□ -0.25
CAPN9-202ENST00000354537 ARHGAP23Q9P227 1491 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 NCAPD2Q15021 1401 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 MED23Q9ULK4 1368 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 EIF2S2P20042 333 aaKnown RBP13.51□□□□□ -0.25
CAPN9-202ENST00000354537 KCNJ4P48050 445 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 ATP2B3Q16720 1220 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 ANO6Q4KMQ2 910 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 SARM1Q6SZW1 724 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 CDC37L1Q7L3B6 337 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 NECAB1Q8N987 351 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
CAPN9-202ENST00000354537 LMO7Q8WWI1 1683 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 NMIQ13287 307 aaPredicted RBP13.51□□□□□ -0.25
CAPN9-202ENST00000354537 CCDC186Q7Z3E2 898 aa13.51□□□□□ -0.25
CAPN9-202ENST00000354537 JARID2Q92833 1246 aaPredicted RBP13.51□□□□□ -0.25
CAPN9-202ENST00000354537 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
CAPN9-202ENST00000354537 C9orf78Q9NZ63 289 aaPredicted RBP13.51□□□□□ -0.25
CAPN9-202ENST00000354537 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 CTAGE5O15320 804 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 USPL1Q5W0Q7 1092 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 ZSCAN25Q6NSZ9 544 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 AACSQ86V21 672 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 IP6K1Q92551 441 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 OGFRQ9NZT2 677 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 CBX1P83916 185 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 LUZP1Q86V48 1076 aa13.5□□□□□ -0.25
CAPN9-202ENST00000354537 MRC1P22897 1456 aa13.49□□□□□ -0.25
CAPN9-202ENST00000354537 G3BP1Q13283 466 aaKnown RBP eCLIP13.49□□□□□ -0.25
CAPN9-202ENST00000354537 LINS1Q8NG48 757 aa13.49□□□□□ -0.25
CAPN9-202ENST00000354537 TRIM5Q9C035 493 aa13.49□□□□□ -0.25
CAPN9-202ENST00000354537 CGNQ9P2M7 1197 aaKnown RBP13.49□□□□□ -0.25
CAPN9-202ENST00000354537 CFAP45Q9UL16 551 aa13.49□□□□□ -0.25
CAPN9-202ENST00000354537 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
CAPN9-202ENST00000354537 ATL3Q6DD88 541 aa13.49□□□□□ -0.25
CAPN9-202ENST00000354537 MRFAP1L1Q96HT8 127 aa13.49□□□□□ -0.25
CAPN9-202ENST00000354537 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 TSPOAP1O95153 1857 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 ZNF165P49910 485 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
CAPN9-202ENST00000354537 DRC7Q8IY82 874 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 KCND1Q9NSA2 647 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 RBM6P78332 1123 aaKnown RBP13.48□□□□□ -0.25
CAPN9-202ENST00000354537 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
CAPN9-202ENST00000354537 TEFQ10587 303 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 RESTQ13127 1097 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 CAMK4Q16566 473 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 AMOTQ4VCS5 1084 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 FAM227BQ96M60 508 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 LLPHQ9BRT6 129 aaKnown RBP13.48□□□□□ -0.25
CAPN9-202ENST00000354537 MAP3K2Q9Y2U5 619 aa13.48□□□□□ -0.25
CAPN9-202ENST00000354537 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
CAPN9-202ENST00000354537 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
CAPN9-202ENST00000354537 SASH1O94885 1247 aa13.47□□□□□ -0.25
CAPN9-202ENST00000354537 TNNT1P13805 278 aa13.47□□□□□ -0.25
CAPN9-202ENST00000354537 TPRNQ4KMQ1 711 aa13.47□□□□□ -0.25
CAPN9-202ENST00000354537 PLEKHO1Q53GL0 409 aaPredicted RBP13.47□□□□□ -0.25
CAPN9-202ENST00000354537 EAF2Q96CJ1 260 aaPredicted RBP13.47□□□□□ -0.25
CAPN9-202ENST00000354537 ARID3AQ99856 593 aa13.47□□□□□ -0.25
CAPN9-202ENST00000354537 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms