RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 CWC25Q9NXE8 425 aaPredicted RBP4.46□□□□□ -1.69
RNF38-203ENST00000353739 SMC3Q9UQE7 1217 aa4.46□□□□□ -1.69
RNF38-203ENST00000353739 KCPQ6ZWJ8 1503 aa4.46□□□□□ -1.69
RNF38-203ENST00000353739 JCADQ9P266 1359 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 BRD1O95696 1058 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 ZC3H6P61129 1189 aaKnown RBP4.46□□□□□ -1.7
RNF38-203ENST00000353739 XPCQ01831 940 aaPredicted RBP4.46□□□□□ -1.7
RNF38-203ENST00000353739 RABL6Q3YEC7 729 aaPredicted RBP4.46□□□□□ -1.7
RNF38-203ENST00000353739 XAGE3Q8WTP9 111 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 SUCLG2Q96I99 432 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 FSD1Q9BTV5 496 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 AKAP2Q9Y2D5 859 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 CCDC171Q6TFL3 1326 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 ATP5JP18859 108 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 FAM184AQ8NB25 1140 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 CCDC191Q8NCU4 936 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 HELLSQ9NRZ9 838 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 SNX14Q9Y5W7 946 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 PALLDQ8WX93 1383 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 KCNQ3O43525 872 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 IL15P40933 162 aaPredicted RBP4.46□□□□□ -1.7
RNF38-203ENST00000353739 PDIA6Q15084 440 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 TOM1L2Q6ZVM7 507 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 PRDM11Q9NQV5 511 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 AXIN2Q9Y2T1 843 aa4.46□□□□□ -1.7
RNF38-203ENST00000353739 EVA1CP58658 441 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 UVSSAQ2YD98 709 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 RUFY3Q7L099 469 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 RGS22Q8NE09 1264 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 FOXD4L1Q9NU39 408 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 TAOK2Q9UL54 1235 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 TJP1Q07157 1748 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 SHANK3Q9BYB0 1731 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 AHDC1Q5TGY3 1603 aaPredicted RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 CICQ96RK0 1608 aaPredicted RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 SH3TC1Q8TE82 1336 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 CD2BP2O95400 341 aaKnown RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 AIMP1Q12904 312 aaKnown RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 TSGA10IPQ3SY00 556 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 ZSCAN25Q6NSZ9 544 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 COPS6Q7L5N1 327 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 NFATC2IPQ8NCF5 419 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 AK7Q96M32 723 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 RBM42Q9BTD8 480 aaKnown RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 ZSWIM6Q9HCJ5 1215 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 NASPP49321 788 aaPredicted RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 TNNI3KQ59H18 835 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 CWC27Q6UX04 472 aaKnown RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 LMBRD1Q9NUN5 540 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 FPGT-TNNI3KV9GXZ4 949 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 MED23Q9ULK4 1368 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 STARD3NLO95772 234 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 ZFYP08048 801 aaPredicted RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 ZSCAN22P10073 491 aaPredicted RBP4.45□□□□□ -1.7
RNF38-203ENST00000353739 MYL6BP14649 208 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 MCM5P33992 734 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 BRINP3Q76B58 766 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 TMOD3Q9NYL9 352 aa4.45□□□□□ -1.7
RNF38-203ENST00000353739 ANKRD36CQ5JPF3 1778 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 TPM3P06753 285 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 CASTP20810 708 aaKnown RBP4.44□□□□□ -1.7
RNF38-203ENST00000353739 CWF19L2Q2TBE0 894 aaKnown RBP4.44□□□□□ -1.7
RNF38-203ENST00000353739 ZSCAN23Q3MJ62 389 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 LRSAM1Q6UWE0 723 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 TTC14Q96N46 770 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 PLA2G12BQ9BX93 195 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 GZF1Q9H116 711 aaPredicted RBP4.44□□□□□ -1.7
RNF38-203ENST00000353739 TSPY26PQ9H489 355 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 RPAP1Q9BWH6 1393 aaPredicted RBP4.44□□□□□ -1.7
RNF38-203ENST00000353739 STRCQ7RTU9 1775 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 H7C1W4 665 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 XRCC6P12956 609 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNF38-203ENST00000353739 BLOC1S2Q6QNY1 142 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 JAKMIP1Q96N16 626 aaKnown RBP4.44□□□□□ -1.7
RNF38-203ENST00000353739 HAUS7Q99871 368 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 CTNNA3Q9UI47 895 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 CDHR2Q9BYE9 1310 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 CARMIL3Q8ND23 1372 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 ZNF609O15014 1411 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 IGKV5-2P06315 115 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 NMIQ13287 307 aaPredicted RBP4.44□□□□□ -1.7
RNF38-203ENST00000353739 PROSER3Q2NL68 480 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 CCDC158Q5M9N0 1113 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 CCDC183Q5T5S1 534 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 CREB3L3Q68CJ9 461 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 MAP4K1Q92918 833 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 ZNF496Q96IT1 587 aaPredicted RBP4.44□□□□□ -1.7
RNF38-203ENST00000353739 LLPHQ9BRT6 129 aaKnown RBP4.44□□□□□ -1.7
RNF38-203ENST00000353739 CCDC39Q9UFE4 941 aa4.44□□□□□ -1.7
RNF38-203ENST00000353739 A0A087WZG4 1122 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 PRPF40AO75400 957 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 MCMDC2Q4G0Z9 681 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 ATL3Q6DD88 541 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 RBM33Q96EV2 1170 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 PPP1R9BQ96SB3 815 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 DSCC1Q9BVC3 393 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 CYP27B1O15528 508 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 STX6O43752 255 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 RPS6KB1P23443 525 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 AK2P54819 239 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms