RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MAP4K1Q92918 833 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 NMIQ13287 307 aaPredicted RBP29.31■■■□□ 2.28
CPNE1-202ENST00000352393 RBM10P98175 930 aaKnown RBP29.3■■■□□ 2.28
CPNE1-202ENST00000352393 PIBF1Q8WXW3 757 aa29.3■■■□□ 2.28
CPNE1-202ENST00000352393 FAM227BQ96M60 508 aa29.3■■■□□ 2.28
CPNE1-202ENST00000352393 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.3■■■□□ 2.28
CPNE1-202ENST00000352393 EAF2Q96CJ1 260 aaPredicted RBP29.3■■■□□ 2.28
CPNE1-202ENST00000352393 TPCN1Q9ULQ1 816 aa29.3■■■□□ 2.28
CPNE1-202ENST00000352393 PRAMEF22A3QJZ6 481 aa29.29■■■□□ 2.28
CPNE1-202ENST00000352393 KDM4AO75164 1064 aa29.29■■■□□ 2.28
CPNE1-202ENST00000352393 TRHP20396 242 aaPredicted RBP29.29■■■□□ 2.28
CPNE1-202ENST00000352393 MAP7D2Q96T17 732 aa29.29■■■□□ 2.28
CPNE1-202ENST00000352393 NPHP4O75161 1426 aaPredicted RBP29.29■■■□□ 2.28
CPNE1-202ENST00000352393 PSME1Q06323 249 aa29.29■■■□□ 2.28
CPNE1-202ENST00000352393 TPRNQ4KMQ1 711 aa29.29■■■□□ 2.28
CPNE1-202ENST00000352393 GIMAP6Q6P9H5 292 aa29.29■■■□□ 2.28
CPNE1-202ENST00000352393 BICC1Q9H694 974 aaKnown RBP29.29■■■□□ 2.28
CPNE1-202ENST00000352393 JCADQ9P266 1359 aa29.28■■■□□ 2.28
CPNE1-202ENST00000352393 MED23Q9ULK4 1368 aa29.28■■■□□ 2.28
CPNE1-202ENST00000352393 VPS37CA5D8V6 355 aaPredicted RBP29.28■■■□□ 2.28
CPNE1-202ENST00000352393 C5P01031 1676 aa29.28■■■□□ 2.28
CPNE1-202ENST00000352393 SLC27A2O14975 620 aa29.27■■■□□ 2.28
CPNE1-202ENST00000352393 DTNBO60941 627 aa29.27■■■□□ 2.28
CPNE1-202ENST00000352393 NECAB1Q8N987 351 aa29.27■■■□□ 2.28
CPNE1-202ENST00000352393 ARHGEF25Q86VW2 580 aa29.27■■■□□ 2.28
CPNE1-202ENST00000352393 DDX54Q8TDD1 881 aaKnown RBP29.27■■■□□ 2.28
CPNE1-202ENST00000352393 PDIA4P13667 645 aaKnown RBP29.26■■■□□ 2.27
CPNE1-202ENST00000352393 PSMA5P28066 241 aa29.26■■■□□ 2.27
CPNE1-202ENST00000352393 G3BP1Q13283 466 aaKnown RBP eCLIP29.26■■■□□ 2.272e-8■□□□□ 11.1
CPNE1-202ENST00000352393 DDX21Q9NR30 783 aaKnown RBP eCLIP29.26■■■□□ 2.27
CPNE1-202ENST00000352393 FAM13BQ9NYF5 915 aa29.26■■■□□ 2.27
CPNE1-202ENST00000352393 TLR7Q9NYK1 1049 aaKnown RBP29.26■■■□□ 2.27
CPNE1-202ENST00000352393 A0A0D9SFI3 127 aa29.25■■■□□ 2.27
CPNE1-202ENST00000352393 KCNJ4P48050 445 aa29.25■■■□□ 2.27
CPNE1-202ENST00000352393 ZNF830Q96NB3 372 aaPredicted RBP29.25■■■□□ 2.27
CPNE1-202ENST00000352393 DDX58O95786 925 aaKnown RBP29.24■■■□□ 2.27
CPNE1-202ENST00000352393 ESCO1Q5FWF5 840 aa29.24■■■□□ 2.27
CPNE1-202ENST00000352393 CCDC8Q9H0W5 538 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-202ENST00000352393 COL9A3Q14050 684 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-202ENST00000352393 MPNDQ8N594 471 aa29.24■■■□□ 2.27
CPNE1-202ENST00000352393 ALDH8A1Q9H2A2 487 aaPredicted RBP29.23■■■□□ 2.27
CPNE1-202ENST00000352393 TTC12Q9H892 705 aaPredicted RBP29.23■■■□□ 2.27
CPNE1-202ENST00000352393 ELP1O95163 1332 aa29.23■■■□□ 2.27
CPNE1-202ENST00000352393 GCP02774 474 aa29.23■■■□□ 2.27
CPNE1-202ENST00000352393 PDIA6Q15084 440 aa29.23■■■□□ 2.27
CPNE1-202ENST00000352393 VSIG10Q8N0Z9 540 aa29.23■■■□□ 2.27
CPNE1-202ENST00000352393 LARP1BQ659C4 914 aaKnown RBP29.22■■■□□ 2.27
CPNE1-202ENST00000352393 CDC37L1Q7L3B6 337 aa29.22■■■□□ 2.27
CPNE1-202ENST00000352393 TTC6Q86TZ1 520 aa29.22■■■□□ 2.27
CPNE1-202ENST00000352393 ANKRD24Q8TF21 1146 aa29.22■■■□□ 2.27
CPNE1-202ENST00000352393 KRT85P78386 507 aa29.21■■■□□ 2.27
CPNE1-202ENST00000352393 NOLC1Q14978 699 aaKnown RBP eCLIP29.21■■■□□ 2.273e-8■□□□□ 8.2
CPNE1-202ENST00000352393 SPTLC3Q9NUV7 552 aa29.21■■■□□ 2.27
CPNE1-202ENST00000352393 AP5Z1O43299 807 aa29.21■■■□□ 2.27
CPNE1-202ENST00000352393 IGKV5-2P06315 115 aa29.21■■■□□ 2.27
CPNE1-202ENST00000352393 ANKRD1Q15327 319 aa29.21■■■□□ 2.27
CPNE1-202ENST00000352393 RNF20Q5VTR2 975 aa29.21■■■□□ 2.27
CPNE1-202ENST00000352393 RBM33Q96EV2 1170 aaKnown RBP29.21■■■□□ 2.27
CPNE1-202ENST00000352393 FSD1Q9BTV5 496 aa29.21■■■□□ 2.27
CPNE1-202ENST00000352393 TRPM3Q9HCF6 1732 aaPredicted RBP29.2■■■□□ 2.27
CPNE1-202ENST00000352393 PDCP20941 246 aa29.2■■■□□ 2.27
CPNE1-202ENST00000352393 RPS6KB1P23443 525 aa29.2■■■□□ 2.27
CPNE1-202ENST00000352393 BLOC1S2Q6QNY1 142 aa29.2■■■□□ 2.27
CPNE1-202ENST00000352393 SCN11AQ9UI33 1791 aa29.2■■■□□ 2.26
CPNE1-202ENST00000352393 MYRIPQ8NFW9 859 aa29.2■■■□□ 2.26
CPNE1-202ENST00000352393 BOLA2Q9H3K6 86 aa29.19■■■□□ 2.26
CPNE1-202ENST00000352393 RGPD5Q99666 1765 aa29.19■■■□□ 2.26
CPNE1-202ENST00000352393 ZNF142P52746 1687 aaPredicted RBP29.18■■■□□ 2.26
CPNE1-202ENST00000352393 CCDC192P0DO97 292 aa29.18■■■□□ 2.26
CPNE1-202ENST00000352393 TAF6LQ9Y6J9 622 aa29.18■■■□□ 2.26
CPNE1-202ENST00000352393 TOB2Q14106 344 aaPredicted RBP29.18■■■□□ 2.26
CPNE1-202ENST00000352393 MTERF4Q7Z6M4 381 aaKnown RBP29.18■■■□□ 2.26
CPNE1-202ENST00000352393 HMG20BQ9P0W2 317 aa29.18■■■□□ 2.26
CPNE1-202ENST00000352393 AIMP1Q12904 312 aaKnown RBP29.17■■■□□ 2.26
CPNE1-202ENST00000352393 TSGA10IPQ3SY00 556 aa29.17■■■□□ 2.26
CPNE1-202ENST00000352393 PRIMPOLQ96LW4 560 aa29.17■■■□□ 2.26
CPNE1-202ENST00000352393 SIL1Q9H173 461 aa29.17■■■□□ 2.26
CPNE1-202ENST00000352393 ZNF589Q86UQ0 364 aaPredicted RBP29.16■■■□□ 2.26
CPNE1-202ENST00000352393 DNTTIP2Q5QJE6 756 aaKnown RBP29.15■■■□□ 2.26
CPNE1-202ENST00000352393 LARP1Q6PKG0 1096 aaKnown RBP29.15■■■□□ 2.26
CPNE1-202ENST00000352393 FERMT3Q86UX7 667 aa29.15■■■□□ 2.26
CPNE1-202ENST00000352393 ANKLE2Q86XL3 938 aa29.15■■■□□ 2.26
CPNE1-202ENST00000352393 NEURL1BA8MQ27 555 aa29.15■■■□□ 2.26
CPNE1-202ENST00000352393 C17orf53Q8N3J3 647 aaPredicted RBP29.15■■■□□ 2.26
CPNE1-202ENST00000352393 TCEANC2Q96MN5 208 aa29.15■■■□□ 2.26
CPNE1-202ENST00000352393 RIC3Q7Z5B4 369 aa29.14■■■□□ 2.26
CPNE1-202ENST00000352393 NUP62CLQ9H1M0 184 aa29.14■■■□□ 2.26
CPNE1-202ENST00000352393 LIG1P18858 919 aa29.14■■■□□ 2.25
CPNE1-202ENST00000352393 MAP3K11Q16584 847 aa29.14■■■□□ 2.25
CPNE1-202ENST00000352393 KLHDC4Q8TBB5 520 aa29.14■■■□□ 2.25
CPNE1-202ENST00000352393 USPL1Q5W0Q7 1092 aa29.13■■■□□ 2.25
CPNE1-202ENST00000352393 FAM173BQ6P4H8 233 aa29.13■■■□□ 2.25
CPNE1-202ENST00000352393 FAM200AQ8TCP9 573 aa29.13■■■□□ 2.25
CPNE1-202ENST00000352393 RFX7Q2KHR2 1363 aa29.13■■■□□ 2.25
CPNE1-202ENST00000352393 TAF5LO75529 589 aa29.12■■■□□ 2.25
CPNE1-202ENST00000352393 TPM3P06753 285 aa29.12■■■□□ 2.25
CPNE1-202ENST00000352393 GCKRQ14397 625 aa29.12■■■□□ 2.25
CPNE1-202ENST00000352393 EPHA10Q5JZY3 1008 aa29.12■■■□□ 2.25
CPNE1-202ENST00000352393 KCNF1Q9H3M0 494 aa29.12■■■□□ 2.25
CPNE1-202ENST00000352393 AXIN2Q9Y2T1 843 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 194.9 ms